RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 CCL22O00626 93 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 CD5LO43866 347 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 CDRT1O95170 752 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 CTSBP07858 339 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 NGFRP08138 427 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 ZNF43P17038 809 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 ORM2P19652 201 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 RPL22P35268 128 aaKnown RBP6.42□□□□□ -1.38
HDAC3-216ENST00000523088 FOLR3P41439 243 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 GUCA1AP43080 201 aaPredicted RBP6.42□□□□□ -1.38
HDAC3-216ENST00000523088 TSFMP43897 325 aaKnown RBP6.42□□□□□ -1.38
HDAC3-216ENST00000523088 BDKRB1P46663 353 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 SELENOPP49908 381 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 ATP1B3P54709 279 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 GRB2P62993 217 aaKnown RBP6.42□□□□□ -1.38
HDAC3-216ENST00000523088 SLC35B1P78383 322 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 TNFAIP6P98066 277 aaPredicted RBP6.42□□□□□ -1.38
HDAC3-216ENST00000523088 ALG10Q5BKT4 473 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 FAM182AQ5T1J6 154 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 TEX36Q5VZQ5 186 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 ZNF57Q68EA5 555 aaPredicted RBP6.42□□□□□ -1.38
HDAC3-216ENST00000523088 ZNF343Q6P1L6 599 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 MRPL14Q6P1L8 145 aaKnown RBP6.42□□□□□ -1.38
HDAC3-216ENST00000523088 CNIH2Q6PI25 160 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 BTNL8Q6UX41 500 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 TIFABQ6ZNK6 161 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 ZNF788Q6ZQV5 615 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 LIAT1Q6ZQX7 453 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 FAM19A5Q7Z5A7 132 aaPredicted RBP6.42□□□□□ -1.38
HDAC3-216ENST00000523088 TCEANCQ8N8B7 351 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 OR10V1Q8NGI7 309 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 OR6T1Q8NGN1 323 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 OR1L3Q8NH93 324 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 SDSLQ96GA7 329 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 MBOAT4Q96T53 435 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 CDH20Q9HBT6 801 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 ZNF71Q9NQZ8 489 aaPredicted RBP6.42□□□□□ -1.38
HDAC3-216ENST00000523088 ANXA10Q9UJ72 324 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 CES1P1Q9UKY3 287 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 FUT9Q9Y231 359 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 VDAC3Q9Y277 283 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 RNF115Q9Y4L5 304 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 TENM4Q6N022 2769 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 TNRC6AQ8NDV7 1962 aaKnown RBP6.41□□□□□ -1.38
HDAC3-216ENST00000523088 TRBV24-1A0A075B6N3 115 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 A0A0A6YYD5 115 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 IGHV2-26A0A0B4J1V2 119 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 TCRBV7S2A1N4TA0A589 114 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 MEIS3P1A6NDR6 274 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 TMEM235A6NFC5 223 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 OR4C46A6NHA9 309 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 MBD3L5A6NJ08 208 aaPredicted RBP6.41□□□□□ -1.38
HDAC3-216ENST00000523088 CGB1A6NKQ9 187 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 NPIPB5A8MRT5 1133 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 EEDO75530 441 aaKnown RBP6.41□□□□□ -1.38
HDAC3-216ENST00000523088 DHRS3O75911 302 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 SOX14O95416 240 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 CATP04040 527 aaKnown RBP6.41□□□□□ -1.38
HDAC3-216ENST00000523088 PSMB1P20618 241 aaKnown RBP6.41□□□□□ -1.38
HDAC3-216ENST00000523088 HRH1P35367 487 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 TMEM50BP56557 158 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 TAS2R19P59542 299 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 RPS23P62266 143 aaKnown RBP6.41□□□□□ -1.38
HDAC3-216ENST00000523088 ADORA2A-AS1P86434 159 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 TIAL1Q01085 375 aaKnown RBP eCLIP6.41□□□□□ -1.38
HDAC3-216ENST00000523088 EXOSC7Q15024 291 aaKnown RBP6.41□□□□□ -1.38
HDAC3-216ENST00000523088 RPEL1Q2QD12 228 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 TDRG1Q3Y452 100 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 ZNF385BQ569K4 471 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 ATP1A1-AS1Q5TC04 95 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 SPATA31B1PQ5VZV4 182 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 UNQ5815/PRO19632Q6UWF5 114 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 ZNF730Q6ZMV8 503 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 ZNF534Q76KX8 674 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 C16orf82Q7Z2V1 217 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 SPNS2Q8IVW8 549 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 FGFRL1Q8N441 504 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 DEFB125Q8N687 156 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 SUMF2Q8NBJ7 301 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 SYT8Q8NBV8 401 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.41□□□□□ -1.38
HDAC3-216ENST00000523088 OR13A1Q8NGR1 328 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 OR2T27Q8NH04 317 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 OR5AK2Q8NH90 309 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 ZNF675Q8TD23 568 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 MBD3L1Q8WWY6 194 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 SARAFQ96BY9 339 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 ZMYND19Q96E35 227 aaPredicted RBP6.41□□□□□ -1.38
HDAC3-216ENST00000523088 RASL10BQ96S79 203 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 NKX3-1Q99801 234 aaPredicted RBP6.41□□□□□ -1.38
HDAC3-216ENST00000523088 NIPSNAP3BQ9BS92 247 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 CDCP1Q9H5V8 836 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 TXNL4BQ9NX01 149 aaKnown RBP6.41□□□□□ -1.38
HDAC3-216ENST00000523088 KCNIP1Q9NZI2 227 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 LSM5Q9Y4Y9 91 aaKnown RBP6.41□□□□□ -1.38
HDAC3-216ENST00000523088 IER3IP1Q9Y5U9 82 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 SPTBN1Q01082 2364 aaKnown RBP6.41□□□□□ -1.38
HDAC3-216ENST00000523088 DOCK10Q96BY6 2186 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 CNTRLQ7Z7A1 2325 aa6.41□□□□□ -1.38
HDAC3-216ENST00000523088 LRRK2Q5S007 2527 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms