RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 RAMP3O60896 148 aa13.97□□□□□ -0.17
PCDHGA11-202ENST00000518882 CER1O95813 267 aa13.97□□□□□ -0.17
PCDHGA11-202ENST00000518882 OPN1MWP04001 364 aa13.97□□□□□ -0.17
PCDHGA11-202ENST00000518882 OPN1MW2P0DN77 364 aa13.97□□□□□ -0.17
PCDHGA11-202ENST00000518882 OPN1MW3P0DN78 364 aa13.97□□□□□ -0.17
PCDHGA11-202ENST00000518882 ADIRFQ15847 76 aa13.97□□□□□ -0.17
PCDHGA11-202ENST00000518882 PEAR1Q5VY43 1037 aaPredicted RBP13.97□□□□□ -0.17
PCDHGA11-202ENST00000518882 FAM53AQ6NSI3 398 aaPredicted RBP13.97□□□□□ -0.17
PCDHGA11-202ENST00000518882 ACSM6Q6P461 480 aa13.97□□□□□ -0.17
PCDHGA11-202ENST00000518882 TMEM251Q8N6I4 163 aa13.97□□□□□ -0.17
PCDHGA11-202ENST00000518882 SCCPDHQ8NBX0 429 aa13.97□□□□□ -0.17
PCDHGA11-202ENST00000518882 LHX4Q969G2 390 aa13.97□□□□□ -0.17
PCDHGA11-202ENST00000518882 SMIM7Q9BQ49 75 aa13.97□□□□□ -0.17
PCDHGA11-202ENST00000518882 PARD6GQ9BYG4 376 aaPredicted RBP13.97□□□□□ -0.17
PCDHGA11-202ENST00000518882 STRADBQ9C0K7 418 aa13.97□□□□□ -0.17
PCDHGA11-202ENST00000518882 GP6Q9HCN6 339 aa13.97□□□□□ -0.17
PCDHGA11-202ENST00000518882 PRRC2CQ9Y520 2896 aaKnown RBP13.96□□□□□ -0.17
PCDHGA11-202ENST00000518882 TMEM14EPQ6UXP3 125 aa13.96□□□□□ -0.17
PCDHGA11-202ENST00000518882 MOB1BQ7L9L4 216 aa13.96□□□□□ -0.17
PCDHGA11-202ENST00000518882 MDP1Q86V88 176 aa13.96□□□□□ -0.17
PCDHGA11-202ENST00000518882 PINX1Q96BK5 328 aaKnown RBP13.96□□□□□ -0.17
PCDHGA11-202ENST00000518882 HIST1H2BLQ99880 126 aa13.96□□□□□ -0.17
PCDHGA11-202ENST00000518882 MBNL3Q9NUK0 354 aaKnown RBP13.96□□□□□ -0.17
PCDHGA11-202ENST00000518882 GFOD1Q9NXC2 390 aa13.96□□□□□ -0.17
PCDHGA11-202ENST00000518882 URB1O60287 2271 aaKnown RBP13.96□□□□□ -0.18
PCDHGA11-202ENST00000518882 CLDN1O95832 211 aa13.95□□□□□ -0.18
PCDHGA11-202ENST00000518882 ERVK11-1P61568 191 aa13.95□□□□□ -0.18
PCDHGA11-202ENST00000518882 DEFA6Q01524 100 aa13.95□□□□□ -0.18
PCDHGA11-202ENST00000518882 MEF2BQ02080 365 aaPredicted RBP13.95□□□□□ -0.18
PCDHGA11-202ENST00000518882 TNFRSF9Q07011 255 aa13.95□□□□□ -0.18
PCDHGA11-202ENST00000518882 OR1C1Q15619 314 aa13.95□□□□□ -0.18
PCDHGA11-202ENST00000518882 C16orf82Q7Z2V1 217 aa13.95□□□□□ -0.18
PCDHGA11-202ENST00000518882 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.95□□□□□ -0.18
PCDHGA11-202ENST00000518882 NECAP1Q8NC96 275 aa13.95□□□□□ -0.18
PCDHGA11-202ENST00000518882 OR4X1Q8NH49 305 aa13.95□□□□□ -0.18
PCDHGA11-202ENST00000518882 SLC39A9Q9NUM3 307 aa13.95□□□□□ -0.18
PCDHGA11-202ENST00000518882 IFNA1P01562 189 aa13.95□□□□□ -0.18
PCDHGA11-202ENST00000518882 SELEP16581 610 aa13.95□□□□□ -0.18
PCDHGA11-202ENST00000518882 CEBPDP49716 269 aaPredicted RBP13.95□□□□□ -0.18
PCDHGA11-202ENST00000518882 ABHD17BQ5VST6 288 aa13.95□□□□□ -0.18
PCDHGA11-202ENST00000518882 NCR3LG1Q68D85 454 aa13.95□□□□□ -0.18
PCDHGA11-202ENST00000518882 GATAD1Q8WUU5 269 aa13.95□□□□□ -0.18
PCDHGA11-202ENST00000518882 C5orf30Q96GV9 206 aa13.95□□□□□ -0.18
PCDHGA11-202ENST00000518882 PACRGQ96M98 296 aaPredicted RBP13.95□□□□□ -0.18
PCDHGA11-202ENST00000518882 CTDSP1Q9GZU7 261 aa13.95□□□□□ -0.18
PCDHGA11-202ENST00000518882 SLC25A22Q9H936 323 aa13.95□□□□□ -0.18
PCDHGA11-202ENST00000518882 NAT8Q9UHE5 227 aa13.95□□□□□ -0.18
PCDHGA11-202ENST00000518882 PFN1P07737 140 aaKnown RBP13.94□□□□□ -0.18
PCDHGA11-202ENST00000518882 ERVS71-1P61550 626 aa13.94□□□□□ -0.18
PCDHGA11-202ENST00000518882 UNQ6494/PRO21346Q6UXR6 183 aa13.94□□□□□ -0.18
PCDHGA11-202ENST00000518882 ZNF600Q6ZNG1 722 aa13.94□□□□□ -0.18
PCDHGA11-202ENST00000518882 LINC00696Q6ZRV3 163 aa13.94□□□□□ -0.18
PCDHGA11-202ENST00000518882 CYP2G1PQ6ZSU1 146 aa13.94□□□□□ -0.18
PCDHGA11-202ENST00000518882 OR10A7Q8NGE5 316 aa13.94□□□□□ -0.18
PCDHGA11-202ENST00000518882 S100PBPQ96BU1 408 aa13.94□□□□□ -0.18
PCDHGA11-202ENST00000518882 RPUSD4Q96CM3 377 aaKnown RBP13.94□□□□□ -0.18
PCDHGA11-202ENST00000518882 C14orf144Q96I85 54 aa13.94□□□□□ -0.18
PCDHGA11-202ENST00000518882 CDIPTO14735 213 aa13.94□□□□□ -0.18
PCDHGA11-202ENST00000518882 TGOLN2O43493 480 aa13.94□□□□□ -0.18
PCDHGA11-202ENST00000518882 KRASP01116 189 aa13.94□□□□□ -0.18
PCDHGA11-202ENST00000518882 CELA3BP08861 270 aa13.94□□□□□ -0.18
PCDHGA11-202ENST00000518882 G6PCP35575 357 aa13.94□□□□□ -0.18
PCDHGA11-202ENST00000518882 RPL30P62888 115 aaKnown RBP13.94□□□□□ -0.18
PCDHGA11-202ENST00000518882 HOXA4Q00056 320 aaPredicted RBP13.94□□□□□ -0.18
PCDHGA11-202ENST00000518882 RTP5Q14D33 572 aa13.94□□□□□ -0.18
PCDHGA11-202ENST00000518882 ALKBH6Q3KRA9 238 aa13.94□□□□□ -0.18
PCDHGA11-202ENST00000518882 AGMATQ9BSE5 352 aa13.94□□□□□ -0.18
PCDHGA11-202ENST00000518882 CLN8Q9UBY8 286 aa13.94□□□□□ -0.18
PCDHGA11-202ENST00000518882 HSPB7Q9UBY9 170 aa13.94□□□□□ -0.18
PCDHGA11-202ENST00000518882 WIPI2Q9Y4P8 454 aa13.94□□□□□ -0.18
PCDHGA11-202ENST00000518882 KBTBD11O94819 623 aa13.93□□□□□ -0.18
PCDHGA11-202ENST00000518882 GZMHP20718 246 aa13.93□□□□□ -0.18
PCDHGA11-202ENST00000518882 RPL23P62829 140 aaKnown RBP13.93□□□□□ -0.18
PCDHGA11-202ENST00000518882 PMS2P11Q13670 270 aa13.93□□□□□ -0.18
PCDHGA11-202ENST00000518882 TMEM241Q24JQ0 296 aa13.93□□□□□ -0.18
PCDHGA11-202ENST00000518882 CENPVQ7Z7K6 275 aaPredicted RBP13.93□□□□□ -0.18
PCDHGA11-202ENST00000518882 MCEMP1Q8IX19 187 aa13.93□□□□□ -0.18
PCDHGA11-202ENST00000518882 BCL2L2Q92843 193 aaPredicted RBP13.93□□□□□ -0.18
PCDHGA11-202ENST00000518882 RTL8AQ9BWD3 113 aa13.93□□□□□ -0.18
PCDHGA11-202ENST00000518882 UFSP2Q9NUQ7 469 aa13.93□□□□□ -0.18
PCDHGA11-202ENST00000518882 ZDBF2Q9HCK1 2354 aa13.93□□□□□ -0.18
PCDHGA11-202ENST00000518882 NBEAQ8NFP9 2946 aa13.93□□□□□ -0.18
PCDHGA11-202ENST00000518882 FAM90A26D6RGX4 464 aa13.93□□□□□ -0.18
PCDHGA11-202ENST00000518882 RPS16P62249 146 aaKnown RBP13.93□□□□□ -0.18
PCDHGA11-202ENST00000518882 PLGLB1Q02325 96 aa13.93□□□□□ -0.18
PCDHGA11-202ENST00000518882 COL10A1Q03692 680 aa13.93□□□□□ -0.18
PCDHGA11-202ENST00000518882 ZNF816Q0VGE8 651 aaPredicted RBP13.93□□□□□ -0.18
PCDHGA11-202ENST00000518882 OR1L1Q8NH94 360 aa13.93□□□□□ -0.18
PCDHGA11-202ENST00000518882 WDYHV1Q96HA8 205 aa13.93□□□□□ -0.18
PCDHGA11-202ENST00000518882 ELOVL1Q9BW60 279 aa13.93□□□□□ -0.18
PCDHGA11-202ENST00000518882 SPRY4Q9C004 299 aa13.93□□□□□ -0.18
PCDHGA11-202ENST00000518882 PRO1933Q9H354 126 aa13.93□□□□□ -0.18
PCDHGA11-202ENST00000518882 SRD5A3Q9H8P0 318 aa13.93□□□□□ -0.18
PCDHGA11-202ENST00000518882 PITPNC1Q9UKF7 332 aa13.93□□□□□ -0.18
PCDHGA11-202ENST00000518882 GAB2Q9UQC2 676 aa13.93□□□□□ -0.18
PCDHGA11-202ENST00000518882 TIMM9Q9Y5J7 89 aa13.93□□□□□ -0.18
PCDHGA11-202ENST00000518882 C9orf172C9J069 976 aa13.92□□□□□ -0.18
PCDHGA11-202ENST00000518882 PSPNO60542 156 aa13.92□□□□□ -0.18
PCDHGA11-202ENST00000518882 NXPH2O95156 264 aa13.92□□□□□ -0.18
PCDHGA11-202ENST00000518882 P0C879 139 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms