RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 CEACAM6P40199 344 aa9.16□□□□□ -0.94
SH3RF1-205ENST00000511421 GPR12P47775 334 aa9.16□□□□□ -0.94
SH3RF1-205ENST00000511421 FAM71F2Q6NXP2 309 aa9.16□□□□□ -0.94
SH3RF1-205ENST00000511421 OR4F17Q8NGA8 305 aa9.16□□□□□ -0.94
SH3RF1-205ENST00000511421 CHPT1Q8WUD6 406 aa9.16□□□□□ -0.94
SH3RF1-205ENST00000511421 KCTD7Q96MP8 289 aa9.16□□□□□ -0.94
SH3RF1-205ENST00000511421 OR4F4Q96R69 305 aa9.16□□□□□ -0.94
SH3RF1-205ENST00000511421 CHCHD6Q9BRQ6 235 aa9.16□□□□□ -0.94
SH3RF1-205ENST00000511421 C11orf54Q9H0W9 315 aaPredicted RBP9.16□□□□□ -0.94
SH3RF1-205ENST00000511421 RNF167Q9H6Y7 350 aa9.16□□□□□ -0.94
SH3RF1-205ENST00000511421 PIPOXQ9P0Z9 390 aa9.16□□□□□ -0.94
SH3RF1-205ENST00000511421 LINC00527Q9UJ94 153 aa9.16□□□□□ -0.94
SH3RF1-205ENST00000511421 TSSC4Q9Y5U2 329 aaPredicted RBP9.16□□□□□ -0.94
SH3RF1-205ENST00000511421 METTL21EPA6NDL7 271 aa9.16□□□□□ -0.94
SH3RF1-205ENST00000511421 RAB29O14966 203 aa9.16□□□□□ -0.94
SH3RF1-205ENST00000511421 PLXNB1O43157 2135 aa9.16□□□□□ -0.94
SH3RF1-205ENST00000511421 FCGR3AP08637 254 aa9.16□□□□□ -0.94
SH3RF1-205ENST00000511421 CD3GP09693 182 aa9.16□□□□□ -0.94
SH3RF1-205ENST00000511421 CD36P16671 472 aa9.16□□□□□ -0.94
SH3RF1-205ENST00000511421 GADD45AP24522 165 aa9.16□□□□□ -0.94
SH3RF1-205ENST00000511421 SDC2P34741 201 aa9.16□□□□□ -0.94
SH3RF1-205ENST00000511421 RPL39P5Q59GN2 51 aa9.16□□□□□ -0.94
SH3RF1-205ENST00000511421 C1QL4Q86Z23 238 aa9.16□□□□□ -0.94
SH3RF1-205ENST00000511421 STPG2Q8N412 459 aa9.16□□□□□ -0.94
SH3RF1-205ENST00000511421 ABHD14BQ96IU4 210 aa9.16□□□□□ -0.94
SH3RF1-205ENST00000511421 TOLLIPQ9H0E2 274 aa9.16□□□□□ -0.94
SH3RF1-205ENST00000511421 A0A075B6Q4 140 aa9.15□□□□□ -0.94
SH3RF1-205ENST00000511421 FABP7O15540 132 aa9.15□□□□□ -0.94
SH3RF1-205ENST00000511421 HSPA12AO43301 675 aa9.15□□□□□ -0.94
SH3RF1-205ENST00000511421 PROP1O75360 226 aa9.15□□□□□ -0.94
SH3RF1-205ENST00000511421 CLEC2LP0C7M8 214 aa9.15□□□□□ -0.94
SH3RF1-205ENST00000511421 CT45A6P0DMU7 189 aa9.15□□□□□ -0.94
SH3RF1-205ENST00000511421 CT45A5P0DMU8 189 aa9.15□□□□□ -0.94
SH3RF1-205ENST00000511421 CT45A7P0DMV0 189 aa9.15□□□□□ -0.94
SH3RF1-205ENST00000511421 ACTBP60709 375 aa9.15□□□□□ -0.94
SH3RF1-205ENST00000511421 SAMD5Q5TGI4 173 aa9.15□□□□□ -0.94
SH3RF1-205ENST00000511421 SFXN4Q6P4A7 337 aa9.15□□□□□ -0.94
SH3RF1-205ENST00000511421 FOXRED2Q8IWF2 684 aa9.15□□□□□ -0.94
SH3RF1-205ENST00000511421 OR4A4PQ8NGN8 299 aa9.15□□□□□ -0.94
SH3RF1-205ENST00000511421 EDARADDQ8WWZ3 215 aa9.15□□□□□ -0.94
SH3RF1-205ENST00000511421 RASL11BQ9BPW5 248 aa9.15□□□□□ -0.94
SH3RF1-205ENST00000511421 HSPB9Q9BQS6 159 aa9.15□□□□□ -0.94
SH3RF1-205ENST00000511421 CENPOQ9BU64 300 aa9.15□□□□□ -0.94
SH3RF1-205ENST00000511421 ATG5Q9H1Y0 275 aa9.15□□□□□ -0.94
SH3RF1-205ENST00000511421 GHITMQ9H3K2 345 aa9.15□□□□□ -0.94
SH3RF1-205ENST00000511421 DAPK2Q9UIK4 370 aa9.15□□□□□ -0.94
SH3RF1-205ENST00000511421 ELF5Q9UKW6 265 aaPredicted RBP9.15□□□□□ -0.94
SH3RF1-205ENST00000511421 G3V4G9 280 aa9.14□□□□□ -0.95
SH3RF1-205ENST00000511421 AP4M1O00189 453 aa9.14□□□□□ -0.95
SH3RF1-205ENST00000511421 GSTT2P0CG29 244 aa9.14□□□□□ -0.95
SH3RF1-205ENST00000511421 GSTT2BP0CG30 244 aa9.14□□□□□ -0.95
SH3RF1-205ENST00000511421 SNRPBP14678 240 aaKnown RBP9.14□□□□□ -0.95
SH3RF1-205ENST00000511421 CNTFRP26992 372 aa9.14□□□□□ -0.95
SH3RF1-205ENST00000511421 MRPS15P82914 257 aaKnown RBP9.14□□□□□ -0.95
SH3RF1-205ENST00000511421 MMDQ15546 238 aa9.14□□□□□ -0.95
SH3RF1-205ENST00000511421 IGSF11Q5DX21 431 aa9.14□□□□□ -0.95
SH3RF1-205ENST00000511421 NPBQ8NG41 125 aa9.14□□□□□ -0.95
SH3RF1-205ENST00000511421 MAFIPQ8WZ33 124 aa9.14□□□□□ -0.95
SH3RF1-205ENST00000511421 CABLES2Q9BTV7 478 aa9.14□□□□□ -0.95
SH3RF1-205ENST00000511421 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.14□□□□□ -0.95
SH3RF1-205ENST00000511421 RDH8Q9NYR8 311 aa9.14□□□□□ -0.95
SH3RF1-205ENST00000511421 ZNF230Q9UIE0 474 aaPredicted RBP9.14□□□□□ -0.95
SH3RF1-205ENST00000511421 RNF150Q9ULK6 438 aa9.14□□□□□ -0.95
SH3RF1-205ENST00000511421 LOC100506127A0A0U1RQW1 187 aa9.13□□□□□ -0.95
SH3RF1-205ENST00000511421 H0YJW9 148 aa9.13□□□□□ -0.95
SH3RF1-205ENST00000511421 SOX6P35712 828 aa9.13□□□□□ -0.95
SH3RF1-205ENST00000511421 SERPINB10P48595 397 aa9.13□□□□□ -0.95
SH3RF1-205ENST00000511421 MXD1Q05195 221 aa9.13□□□□□ -0.95
SH3RF1-205ENST00000511421 KIR2DS1Q14954 304 aa9.13□□□□□ -0.95
SH3RF1-205ENST00000511421 SRSF7Q16629 238 aaKnown RBP eCLIP9.13□□□□□ -0.95
SH3RF1-205ENST00000511421 BEAN1Q3B7T3 259 aa9.13□□□□□ -0.95
SH3RF1-205ENST00000511421 FAM131AQ6UXB0 335 aa9.13□□□□□ -0.95
SH3RF1-205ENST00000511421 GLDNQ6ZMI3 551 aaPredicted RBP9.13□□□□□ -0.95
SH3RF1-205ENST00000511421 Q6ZS49 121 aa9.13□□□□□ -0.95
SH3RF1-205ENST00000511421 WFDC9Q8NEX5 89 aa9.13□□□□□ -0.95
SH3RF1-205ENST00000511421 OR5AN1Q8NGI8 311 aa9.13□□□□□ -0.95
SH3RF1-205ENST00000511421 LGALS14Q8TCE9 139 aa9.13□□□□□ -0.95
SH3RF1-205ENST00000511421 PHF21AQ96BD5 680 aa9.13□□□□□ -0.95
SH3RF1-205ENST00000511421 PRKDCP78527 4128 aaKnown RBP9.13□□□□□ -0.95
SH3RF1-205ENST00000511421 IGKV1D-8A0A087WSZ0 117 aa9.13□□□□□ -0.95
SH3RF1-205ENST00000511421 A0A087WXM4 84 aa9.13□□□□□ -0.95
SH3RF1-205ENST00000511421 TRBV6-7A0A0A0MS04 114 aa9.13□□□□□ -0.95
SH3RF1-205ENST00000511421 OR5H14A6NHG9 310 aa9.13□□□□□ -0.95
SH3RF1-205ENST00000511421 NDUFA3O95167 84 aa9.13□□□□□ -0.95
SH3RF1-205ENST00000511421 DIRAS3O95661 229 aa9.13□□□□□ -0.95
SH3RF1-205ENST00000511421 PF4V1P10720 104 aa9.13□□□□□ -0.95
SH3RF1-205ENST00000511421 RPL23AP62750 156 aaKnown RBP9.13□□□□□ -0.95
SH3RF1-205ENST00000511421 SLC35B1P78383 322 aa9.13□□□□□ -0.95
SH3RF1-205ENST00000511421 CFHR3Q02985 330 aa9.13□□□□□ -0.95
SH3RF1-205ENST00000511421 ARFRP1Q13795 201 aa9.13□□□□□ -0.95
SH3RF1-205ENST00000511421 ARL6IP1Q15041 203 aa9.13□□□□□ -0.95
SH3RF1-205ENST00000511421 CDNFQ49AH0 187 aa9.13□□□□□ -0.95
SH3RF1-205ENST00000511421 PDLIM3Q53GG5 364 aaPredicted RBP9.13□□□□□ -0.95
SH3RF1-205ENST00000511421 KHDC1LQ5JSQ8 128 aa9.13□□□□□ -0.95
SH3RF1-205ENST00000511421 KPRPQ5T749 579 aaPredicted RBP9.13□□□□□ -0.95
SH3RF1-205ENST00000511421 COMMD1Q8N668 190 aa9.13□□□□□ -0.95
SH3RF1-205ENST00000511421 TSPAN14Q8NG11 270 aa9.13□□□□□ -0.95
SH3RF1-205ENST00000511421 ZNF107Q9UII5 783 aaPredicted RBP9.13□□□□□ -0.95
SH3RF1-205ENST00000511421 ZNF580Q9UK33 172 aa9.13□□□□□ -0.95
SH3RF1-205ENST00000511421 BET1O15155 118 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms