RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 SAA2-SAA4A0A096LPE2 208 aa12.75□□□□□ -0.37
PDLIM5-212ENST00000509333 LOC100506127A0A0U1RQW1 187 aa12.75□□□□□ -0.37
PDLIM5-212ENST00000509333 TRIM64CA6NLI5 447 aa12.75□□□□□ -0.37
PDLIM5-212ENST00000509333 RAB29O14966 203 aa12.75□□□□□ -0.37
PDLIM5-212ENST00000509333 GSTT2P0CG29 244 aa12.75□□□□□ -0.37
PDLIM5-212ENST00000509333 GSTT2BP0CG30 244 aa12.75□□□□□ -0.37
PDLIM5-212ENST00000509333 SAA2P0DJI9 122 aaPredicted RBP12.75□□□□□ -0.37
PDLIM5-212ENST00000509333 CT45A6P0DMU7 189 aa12.75□□□□□ -0.37
PDLIM5-212ENST00000509333 CT45A5P0DMU8 189 aa12.75□□□□□ -0.37
PDLIM5-212ENST00000509333 CT45A7P0DMV0 189 aa12.75□□□□□ -0.37
PDLIM5-212ENST00000509333 MXD1Q05195 221 aa12.75□□□□□ -0.37
PDLIM5-212ENST00000509333 SRSF7Q16629 238 aaKnown RBP eCLIP12.75□□□□□ -0.37
PDLIM5-212ENST00000509333 SFXN4Q6P4A7 337 aa12.75□□□□□ -0.37
PDLIM5-212ENST00000509333 MEGF8Q7Z7M0 2845 aa12.75□□□□□ -0.37
PDLIM5-212ENST00000509333 YIPF6Q96EC8 236 aa12.75□□□□□ -0.37
PDLIM5-212ENST00000509333 ABHD14BQ96IU4 210 aa12.75□□□□□ -0.37
PDLIM5-212ENST00000509333 NOL4LQ96MY1 436 aaPredicted RBP12.75□□□□□ -0.37
PDLIM5-212ENST00000509333 MRPL20Q9BYC9 149 aaKnown RBP12.75□□□□□ -0.37
PDLIM5-212ENST00000509333 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.75□□□□□ -0.371e-6■■■■■ 27
PDLIM5-212ENST00000509333 LIN7CQ9NUP9 197 aaKnown RBP12.75□□□□□ -0.37
PDLIM5-212ENST00000509333 ZNF230Q9UIE0 474 aaPredicted RBP12.75□□□□□ -0.37
PDLIM5-212ENST00000509333 ELF5Q9UKW6 265 aaPredicted RBP12.75□□□□□ -0.37
PDLIM5-212ENST00000509333 RNF150Q9ULK6 438 aa12.75□□□□□ -0.37
PDLIM5-212ENST00000509333 A0A075B6Q4 140 aa12.74□□□□□ -0.37
PDLIM5-212ENST00000509333 SERPINE3A8MV23 424 aa12.74□□□□□ -0.37
PDLIM5-212ENST00000509333 HSPA12AO43301 675 aa12.74□□□□□ -0.37
PDLIM5-212ENST00000509333 TNFAIP8O95379 198 aa12.74□□□□□ -0.37
PDLIM5-212ENST00000509333 OPN1MWP04001 364 aa12.74□□□□□ -0.37
PDLIM5-212ENST00000509333 FCGR3AP08637 254 aa12.74□□□□□ -0.37
PDLIM5-212ENST00000509333 OPN1MW2P0DN77 364 aa12.74□□□□□ -0.37
PDLIM5-212ENST00000509333 OPN1MW3P0DN78 364 aa12.74□□□□□ -0.37
PDLIM5-212ENST00000509333 SNRPBP14678 240 aaKnown RBP12.74□□□□□ -0.37
PDLIM5-212ENST00000509333 RPL39P5Q59GN2 51 aa12.74□□□□□ -0.37
PDLIM5-212ENST00000509333 ZNF329Q86UD4 541 aa12.74□□□□□ -0.37
PDLIM5-212ENST00000509333 OR4A4PQ8NGN8 299 aa12.74□□□□□ -0.37
PDLIM5-212ENST00000509333 LINC00527Q9UJ94 153 aa12.74□□□□□ -0.37
PDLIM5-212ENST00000509333 TCRBV4S1A1TA0A5B7 111 aa12.73□□□□□ -0.37
PDLIM5-212ENST00000509333 FABP7O15540 132 aa12.73□□□□□ -0.37
PDLIM5-212ENST00000509333 GPR12P47775 334 aa12.73□□□□□ -0.37
PDLIM5-212ENST00000509333 MRPS15P82914 257 aaKnown RBP12.73□□□□□ -0.37
PDLIM5-212ENST00000509333 ARL6IP1Q15041 203 aa12.73□□□□□ -0.37
PDLIM5-212ENST00000509333 IGSF11Q5DX21 431 aa12.73□□□□□ -0.37
PDLIM5-212ENST00000509333 FAM71F2Q6NXP2 309 aa12.73□□□□□ -0.37
PDLIM5-212ENST00000509333 Q6ZS49 121 aa12.73□□□□□ -0.37
PDLIM5-212ENST00000509333 SLC35E3Q7Z769 313 aa12.73□□□□□ -0.37
PDLIM5-212ENST00000509333 FAM71E2Q8N5Q1 922 aa12.73□□□□□ -0.37
PDLIM5-212ENST00000509333 OR5H6Q8NGV6 325 aa12.73□□□□□ -0.37
PDLIM5-212ENST00000509333 CHPT1Q8WUD6 406 aa12.73□□□□□ -0.37
PDLIM5-212ENST00000509333 EDARADDQ8WWZ3 215 aa12.73□□□□□ -0.37
PDLIM5-212ENST00000509333 RASL11BQ9BPW5 248 aa12.73□□□□□ -0.37
PDLIM5-212ENST00000509333 RDH8Q9NYR8 311 aa12.73□□□□□ -0.37
PDLIM5-212ENST00000509333 GAB2Q9UQC2 676 aa12.73□□□□□ -0.37
PDLIM5-212ENST00000509333 IGKV1D-8A0A087WSZ0 117 aa12.72□□□□□ -0.37
PDLIM5-212ENST00000509333 TRBV6-7A0A0A0MS04 114 aa12.72□□□□□ -0.37
PDLIM5-212ENST00000509333 PSMB11A5LHX3 300 aa12.72□□□□□ -0.37
PDLIM5-212ENST00000509333 SERPINB10P48595 397 aa12.72□□□□□ -0.37
PDLIM5-212ENST00000509333 ACTBP60709 375 aa12.72□□□□□ -0.37
PDLIM5-212ENST00000509333 ARFRP1Q13795 201 aa12.72□□□□□ -0.37
PDLIM5-212ENST00000509333 KIR2DS1Q14954 304 aa12.72□□□□□ -0.37
PDLIM5-212ENST00000509333 ZNF260Q3ZCT1 412 aa12.72□□□□□ -0.37
PDLIM5-212ENST00000509333 NPBQ8NG41 125 aa12.72□□□□□ -0.37
PDLIM5-212ENST00000509333 OR5AN1Q8NGI8 311 aa12.72□□□□□ -0.37
PDLIM5-212ENST00000509333 MAFIPQ8WZ33 124 aa12.72□□□□□ -0.37
PDLIM5-212ENST00000509333 PHF21AQ96BD5 680 aa12.72□□□□□ -0.37
PDLIM5-212ENST00000509333 R3HDM4Q96D70 268 aa12.72□□□□□ -0.37
PDLIM5-212ENST00000509333 TSSC4Q9Y5U2 329 aaPredicted RBP12.72□□□□□ -0.37
PDLIM5-212ENST00000509333 DIRAS3O95661 229 aa12.71□□□□□ -0.37
PDLIM5-212ENST00000509333 CNTFRP26992 372 aa12.71□□□□□ -0.37
PDLIM5-212ENST00000509333 SOX6P35712 828 aa12.71□□□□□ -0.37
PDLIM5-212ENST00000509333 TGFBR1P36897 503 aa12.71□□□□□ -0.37
PDLIM5-212ENST00000509333 TALDO1P37837 337 aa12.71□□□□□ -0.37
PDLIM5-212ENST00000509333 RPS19P39019 145 aaKnown RBP12.71□□□□□ -0.37
PDLIM5-212ENST00000509333 SCAND1P57086 179 aa12.71□□□□□ -0.37
PDLIM5-212ENST00000509333 LINC00205P59089 165 aa12.71□□□□□ -0.37
PDLIM5-212ENST00000509333 IDNKQ5T6J7 187 aa12.71□□□□□ -0.37
PDLIM5-212ENST00000509333 HACD4Q5VWC8 232 aa12.71□□□□□ -0.37
PDLIM5-212ENST00000509333 STPG2Q8N412 459 aa12.71□□□□□ -0.37
PDLIM5-212ENST00000509333 WFDC9Q8NEX5 89 aa12.71□□□□□ -0.37
PDLIM5-212ENST00000509333 OR4F17Q8NGA8 305 aa12.71□□□□□ -0.37
PDLIM5-212ENST00000509333 OR4X2Q8NGF9 303 aa12.71□□□□□ -0.37
PDLIM5-212ENST00000509333 LGALS14Q8TCE9 139 aa12.71□□□□□ -0.37
PDLIM5-212ENST00000509333 OR4F4Q96R69 305 aa12.71□□□□□ -0.37
PDLIM5-212ENST00000509333 PLXNB1O43157 2135 aa12.71□□□□□ -0.38
PDLIM5-212ENST00000509333 AP4M1O00189 453 aa12.7□□□□□ -0.38
PDLIM5-212ENST00000509333 AIREO43918 545 aa12.7□□□□□ -0.38
PDLIM5-212ENST00000509333 TMEM127O75204 238 aa12.7□□□□□ -0.38
PDLIM5-212ENST00000509333 GSTP1P09211 210 aaKnown RBP12.7□□□□□ -0.38
PDLIM5-212ENST00000509333 MC5RP33032 325 aa12.7□□□□□ -0.38
PDLIM5-212ENST00000509333 DEFA6Q01524 100 aa12.7□□□□□ -0.38
PDLIM5-212ENST00000509333 TIMM50Q3ZCQ8 353 aa12.7□□□□□ -0.38
PDLIM5-212ENST00000509333 GLDNQ6ZMI3 551 aaPredicted RBP12.7□□□□□ -0.38
PDLIM5-212ENST00000509333 FOXRED2Q8IWF2 684 aa12.7□□□□□ -0.38
PDLIM5-212ENST00000509333 OR10J5Q8NHC4 309 aa12.7□□□□□ -0.38
PDLIM5-212ENST00000509333 HSPB9Q9BQS6 159 aa12.7□□□□□ -0.38
PDLIM5-212ENST00000509333 CABLES2Q9BTV7 478 aa12.7□□□□□ -0.38
PDLIM5-212ENST00000509333 ST6GALNAC5Q9BVH7 336 aa12.7□□□□□ -0.38
PDLIM5-212ENST00000509333 VCX3AQ9NNX9 186 aa12.7□□□□□ -0.38
PDLIM5-212ENST00000509333 RHBDL2Q9NX52 303 aa12.7□□□□□ -0.38
PDLIM5-212ENST00000509333 ZNF221Q9UK13 617 aa12.7□□□□□ -0.38
PDLIM5-212ENST00000509333 A0A1W2PRX2 142 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 231.3 ms