RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 HERPUD1Q15011 391 aa12.03□□□□□ -0.48
RNF4-210ENST00000508235 IGSF11Q5DX21 431 aa12.03□□□□□ -0.48
RNF4-210ENST00000508235 CNIH2Q6PI25 160 aa12.03□□□□□ -0.48
RNF4-210ENST00000508235 Q6ZSV7 163 aa12.03□□□□□ -0.48
RNF4-210ENST00000508235 TMEM219Q86XT9 240 aa12.03□□□□□ -0.48
RNF4-210ENST00000508235 ODF3L1Q8IXM7 274 aa12.03□□□□□ -0.48
RNF4-210ENST00000508235 C3orf56Q8N813 242 aa12.03□□□□□ -0.48
RNF4-210ENST00000508235 RBM14Q96PK6 669 aaKnown RBP12.03□□□□□ -0.48
RNF4-210ENST00000508235 RDH8Q9NYR8 311 aa12.03□□□□□ -0.48
RNF4-210ENST00000508235 CCDC59Q9P031 241 aaKnown RBP12.03□□□□□ -0.48
RNF4-210ENST00000508235 ZNF221Q9UK13 617 aa12.03□□□□□ -0.48
RNF4-210ENST00000508235 FBN1P35555 2871 aaKnown RBP12.03□□□□□ -0.48
RNF4-210ENST00000508235 SAA2-SAA4A0A096LPE2 208 aa12.02□□□□□ -0.49
RNF4-210ENST00000508235 CLPSL1A2RUU4 121 aa12.02□□□□□ -0.49
RNF4-210ENST00000508235 FAM25AB3EWG3 89 aa12.02□□□□□ -0.49
RNF4-210ENST00000508235 FAM25CB3EWG5 89 aa12.02□□□□□ -0.49
RNF4-210ENST00000508235 FAM25GB3EWG6 89 aa12.02□□□□□ -0.49
RNF4-210ENST00000508235 H3BMQ9 156 aa12.02□□□□□ -0.49
RNF4-210ENST00000508235 ST8SIA5O15466 376 aa12.02□□□□□ -0.49
RNF4-210ENST00000508235 EIF4EP06730 217 aaKnown RBP12.02□□□□□ -0.49
RNF4-210ENST00000508235 SAA2P0DJI9 122 aaPredicted RBP12.02□□□□□ -0.49
RNF4-210ENST00000508235 TMEM11P17152 192 aa12.02□□□□□ -0.49
RNF4-210ENST00000508235 CD24P25063 80 aa12.02□□□□□ -0.49
RNF4-210ENST00000508235 C11orf88Q6PI97 169 aa12.02□□□□□ -0.49
RNF4-210ENST00000508235 ZNF833PQ6ZTB9 187 aa12.02□□□□□ -0.49
RNF4-210ENST00000508235 OR2T10Q8NGZ9 312 aa12.02□□□□□ -0.49
RNF4-210ENST00000508235 OR2T6Q8NHC8 308 aa12.02□□□□□ -0.49
RNF4-210ENST00000508235 DYNC2LI1Q8TCX1 351 aa12.02□□□□□ -0.49
RNF4-210ENST00000508235 AGMATQ9BSE5 352 aa12.02□□□□□ -0.49
RNF4-210ENST00000508235 SLC25A33Q9BSK2 321 aa12.02□□□□□ -0.49
RNF4-210ENST00000508235 C11orf54Q9H0W9 315 aaPredicted RBP12.02□□□□□ -0.49
RNF4-210ENST00000508235 IFT46Q9NQC8 304 aa12.02□□□□□ -0.49
RNF4-210ENST00000508235 ANXA10Q9UJ72 324 aa12.02□□□□□ -0.49
RNF4-210ENST00000508235 ADAM30Q9UKF2 790 aa12.02□□□□□ -0.49
RNF4-210ENST00000508235 CEPT1Q9Y6K0 416 aa12.02□□□□□ -0.49
RNF4-210ENST00000508235 TPPPO94811 219 aa12.01□□□□□ -0.49
RNF4-210ENST00000508235 IGKV1D-33P01593 117 aa12.01□□□□□ -0.49
RNF4-210ENST00000508235 IGKV1-33P01594 117 aa12.01□□□□□ -0.49
RNF4-210ENST00000508235 ELK1P19419 428 aa12.01□□□□□ -0.49
RNF4-210ENST00000508235 MDKP21741 143 aaPredicted RBP12.01□□□□□ -0.49
RNF4-210ENST00000508235 PRSS3P35030 304 aa12.01□□□□□ -0.49
RNF4-210ENST00000508235 ARPC4P59998 168 aa12.01□□□□□ -0.49
RNF4-210ENST00000508235 EBI3Q14213 229 aa12.01□□□□□ -0.49
RNF4-210ENST00000508235 HOGA1Q86XE5 327 aa12.01□□□□□ -0.49
RNF4-210ENST00000508235 H1FOOQ8IZA3 346 aaPredicted RBP12.01□□□□□ -0.49
RNF4-210ENST00000508235 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.01□□□□□ -0.49
RNF4-210ENST00000508235 BEST4Q8NFU0 473 aa12.01□□□□□ -0.49
RNF4-210ENST00000508235 LINC01006Q8NI28 216 aa12.01□□□□□ -0.49
RNF4-210ENST00000508235 C15orf40Q8WUR7 153 aa12.01□□□□□ -0.49
RNF4-210ENST00000508235 PRSS22Q9GZN4 317 aa12.01□□□□□ -0.49
RNF4-210ENST00000508235 MOB4Q9Y3A3 225 aa12.01□□□□□ -0.49
RNF4-210ENST00000508235 RNF114Q9Y508 228 aa12.01□□□□□ -0.49
RNF4-210ENST00000508235 RBM7Q9Y580 266 aaKnown RBP12.01□□□□□ -0.49
RNF4-210ENST00000508235 IGKV1D-8A0A087WSZ0 117 aa12□□□□□ -0.49
RNF4-210ENST00000508235 ZNF701M0R085 212 aaPredicted RBP12□□□□□ -0.49
RNF4-210ENST00000508235 RGS5O15539 181 aa12□□□□□ -0.49
RNF4-210ENST00000508235 MOSP00540 346 aa12□□□□□ -0.49
RNF4-210ENST00000508235 GPR12P47775 334 aa12□□□□□ -0.49
RNF4-210ENST00000508235 LSAMPQ13449 338 aa12□□□□□ -0.49
RNF4-210ENST00000508235 Q8N2B8 174 aa12□□□□□ -0.49
RNF4-210ENST00000508235 OR8H1Q8NGG4 311 aa12□□□□□ -0.49
RNF4-210ENST00000508235 TAF15Q92804 592 aaKnown RBP eCLIP12□□□□□ -0.49
RNF4-210ENST00000508235 ABHD14BQ96IU4 210 aa12□□□□□ -0.49
RNF4-210ENST00000508235 PARP12Q9H0J9 701 aaKnown RBP12□□□□□ -0.49
RNF4-210ENST00000508235 SCPEP1Q9HB40 452 aa12□□□□□ -0.49
RNF4-210ENST00000508235 GAB2Q9UQC2 676 aa12□□□□□ -0.49
RNF4-210ENST00000508235 MRPS7Q9Y2R9 242 aaKnown RBP12□□□□□ -0.49
RNF4-210ENST00000508235 IGHV3-72A0A0B4J1Y9 119 aa11.99□□□□□ -0.49
RNF4-210ENST00000508235 HLA-DQB1P01920 261 aa11.99□□□□□ -0.49
RNF4-210ENST00000508235 MC5RP33032 325 aa11.99□□□□□ -0.49
RNF4-210ENST00000508235 OR3A3P47888 321 aa11.99□□□□□ -0.49
RNF4-210ENST00000508235 ARSJQ5FYB0 599 aaPredicted RBP11.99□□□□□ -0.49
RNF4-210ENST00000508235 NABP2Q9BQ15 211 aa11.99□□□□□ -0.49
RNF4-210ENST00000508235 ZNF747Q9BV97 191 aa11.99□□□□□ -0.49
RNF4-210ENST00000508235 NECAP2Q9NVZ3 263 aa11.99□□□□□ -0.49
RNF4-210ENST00000508235 EXTL2Q9UBQ6 330 aa11.99□□□□□ -0.49
RNF4-210ENST00000508235 RSL24D1Q9UHA3 163 aaKnown RBP11.99□□□□□ -0.49
RNF4-210ENST00000508235 OR5H14A6NHG9 310 aa11.98□□□□□ -0.49
RNF4-210ENST00000508235 SULT1C2O00338 296 aa11.98□□□□□ -0.49
RNF4-210ENST00000508235 FGF16O43320 207 aa11.98□□□□□ -0.49
RNF4-210ENST00000508235 SLC22A5O76082 557 aa11.98□□□□□ -0.49
RNF4-210ENST00000508235 OR8U9P0C7N5 309 aa11.98□□□□□ -0.49
RNF4-210ENST00000508235 PTHLHP12272 177 aa11.98□□□□□ -0.49
RNF4-210ENST00000508235 HNF4GQ14541 408 aa11.98□□□□□ -0.49
RNF4-210ENST00000508235 RPL39P5Q59GN2 51 aa11.98□□□□□ -0.49
RNF4-210ENST00000508235 SHISA2Q6UWI4 295 aa11.98□□□□□ -0.49
RNF4-210ENST00000508235 GVQW1Q8N7I0 195 aa11.98□□□□□ -0.49
RNF4-210ENST00000508235 OR5AP2Q8NGF4 316 aa11.98□□□□□ -0.49
RNF4-210ENST00000508235 OR8U1Q8NH10 309 aa11.98□□□□□ -0.49
RNF4-210ENST00000508235 EAF1Q96JC9 268 aaPredicted RBP11.98□□□□□ -0.49
RNF4-210ENST00000508235 ZNF251Q9BRH9 671 aa11.98□□□□□ -0.49
RNF4-210ENST00000508235 MRPL20Q9BYC9 149 aaKnown RBP11.98□□□□□ -0.49
RNF4-210ENST00000508235 OR2D2Q9H210 308 aa11.98□□□□□ -0.49
RNF4-210ENST00000508235 RABL2AQ9UBK7 228 aaPredicted RBP11.98□□□□□ -0.49
RNF4-210ENST00000508235 RNF150Q9ULK6 438 aa11.98□□□□□ -0.49
RNF4-210ENST00000508235 RABL2BQ9UNT1 228 aa11.98□□□□□ -0.49
RNF4-210ENST00000508235 OR2W1Q9Y3N9 320 aa11.98□□□□□ -0.49
RNF4-210ENST00000508235 LUMP51884 338 aaPredicted RBP11.97□□□□□ -0.49
RNF4-210ENST00000508235 TAS2R46P59540 309 aa11.97□□□□□ -0.49
RNF4-210ENST00000508235 SNX29P2Q8IUI4 249 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms