RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 FFAR4Q5NUL3 377 aa11.42□□□□□ -0.58
GPC1-209ENST00000495100 FBXW9Q5XUX1 488 aa11.42□□□□□ -0.58
GPC1-209ENST00000495100 LRRC29Q8WV35 223 aa11.42□□□□□ -0.58
GPC1-209ENST00000495100 FBLN5Q9UBX5 448 aa11.42□□□□□ -0.58
GPC1-209ENST00000495100 LRP5LA4QPB2 252 aa11.41□□□□□ -0.58
GPC1-209ENST00000495100 S1PR2O95136 353 aa11.41□□□□□ -0.58
GPC1-209ENST00000495100 HAND1O96004 215 aa11.41□□□□□ -0.58
GPC1-209ENST00000495100 IGHEP01854 428 aa11.41□□□□□ -0.58
GPC1-209ENST00000495100 FAM3BP58499 235 aaPredicted RBP11.41□□□□□ -0.58
GPC1-209ENST00000495100 RPS23P62266 143 aaKnown RBP11.41□□□□□ -0.58
GPC1-209ENST00000495100 PINX1Q96BK5 328 aaKnown RBP11.41□□□□□ -0.58
GPC1-209ENST00000495100 OR5B12Q96R08 314 aa11.41□□□□□ -0.58
GPC1-209ENST00000495100 RBKSQ9H477 322 aa11.41□□□□□ -0.58
GPC1-209ENST00000495100 TMEM100Q9NV29 134 aa11.41□□□□□ -0.58
GPC1-209ENST00000495100 PSPNO60542 156 aa11.41□□□□□ -0.58
GPC1-209ENST00000495100 ZNF737O75373 536 aa11.41□□□□□ -0.58
GPC1-209ENST00000495100 NDUFB7P17568 137 aa11.41□□□□□ -0.58
GPC1-209ENST00000495100 REG1BP48304 166 aa11.41□□□□□ -0.58
GPC1-209ENST00000495100 HLA-DRB3P79483 266 aa11.41□□□□□ -0.58
GPC1-209ENST00000495100 ARL16Q0P5N6 197 aa11.41□□□□□ -0.58
GPC1-209ENST00000495100 FDCSPQ8NFU4 85 aa11.41□□□□□ -0.58
GPC1-209ENST00000495100 RND1Q92730 232 aa11.41□□□□□ -0.58
GPC1-209ENST00000495100 CARHSP1Q9Y2V2 147 aaKnown RBP11.41□□□□□ -0.58
GPC1-209ENST00000495100 PGA5P0DJD9 388 aa11.4□□□□□ -0.58
GPC1-209ENST00000495100 TRA2AQ13595 282 aaKnown RBP eCLIP11.4□□□□□ -0.58
GPC1-209ENST00000495100 BATFQ16520 125 aa11.4□□□□□ -0.58
GPC1-209ENST00000495100 DRAM1Q8N682 238 aa11.4□□□□□ -0.58
GPC1-209ENST00000495100 GTF3AQ92664 365 aaKnown RBP11.4□□□□□ -0.58
GPC1-209ENST00000495100 GNPNAT1Q96EK6 184 aaPredicted RBP11.4□□□□□ -0.58
GPC1-209ENST00000495100 STRAPQ9Y3F4 350 aaKnown RBP11.4□□□□□ -0.58
GPC1-209ENST00000495100 NTN3O00634 580 aaPredicted RBP11.4□□□□□ -0.58
GPC1-209ENST00000495100 PAGE4O60829 102 aa11.4□□□□□ -0.58
GPC1-209ENST00000495100 TOX4O94842 621 aa11.4□□□□□ -0.58
GPC1-209ENST00000495100 CXCL1P09341 107 aa11.4□□□□□ -0.58
GPC1-209ENST00000495100 SLC25A6P12236 298 aa11.4□□□□□ -0.58
GPC1-209ENST00000495100 FOXF2Q12947 444 aa11.4□□□□□ -0.58
GPC1-209ENST00000495100 OR5A2Q8NGI9 324 aa11.4□□□□□ -0.58
GPC1-209ENST00000495100 OR51G1Q8NGK1 321 aa11.4□□□□□ -0.58
GPC1-209ENST00000495100 LILRB1Q8NHL6 650 aaPredicted RBP11.4□□□□□ -0.58
GPC1-209ENST00000495100 MRPL30Q8TCC3 161 aaKnown RBP11.4□□□□□ -0.58
GPC1-209ENST00000495100 C18orf12Q96KH6 178 aa11.4□□□□□ -0.58
GPC1-209ENST00000495100 ATP5SQ99766 215 aa11.4□□□□□ -0.58
GPC1-209ENST00000495100 LYRM2Q9NU23 88 aaPredicted RBP11.4□□□□□ -0.58
GPC1-209ENST00000495100 TUBD1Q9UJT1 453 aa11.4□□□□□ -0.58
GPC1-209ENST00000495100 GAPDHP04406 335 aaKnown RBP11.4□□□□□ -0.58
GPC1-209ENST00000495100 CTSSP25774 331 aa11.4□□□□□ -0.58
GPC1-209ENST00000495100 PSG7Q13046 419 aa11.4□□□□□ -0.58
GPC1-209ENST00000495100 CDPF1Q6NVV7 123 aa11.4□□□□□ -0.58
GPC1-209ENST00000495100 OR10P1Q8NGE3 313 aa11.4□□□□□ -0.58
GPC1-209ENST00000495100 POM121L2Q96KW2 1035 aa11.4□□□□□ -0.58
GPC1-209ENST00000495100 GUCD1Q96NT3 240 aa11.4□□□□□ -0.58
GPC1-209ENST00000495100 ARV1Q9H2C2 271 aa11.4□□□□□ -0.58
GPC1-209ENST00000495100 DOK5Q9P104 306 aa11.4□□□□□ -0.58
GPC1-209ENST00000495100 ARPC4-TTLL3A0A0A6YYG9 625 aa11.39□□□□□ -0.59
GPC1-209ENST00000495100 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.39□□□□□ -0.59
GPC1-209ENST00000495100 CDS2O95674 445 aa11.39□□□□□ -0.59
GPC1-209ENST00000495100 CD5P06127 495 aa11.39□□□□□ -0.59
GPC1-209ENST00000495100 GPR12P47775 334 aa11.39□□□□□ -0.59
GPC1-209ENST00000495100 GFRA1P56159 465 aa11.39□□□□□ -0.59
GPC1-209ENST00000495100 SPNS3Q6ZMD2 512 aa11.39□□□□□ -0.59
GPC1-209ENST00000495100 C1orf87Q8N0U7 546 aa11.39□□□□□ -0.59
GPC1-209ENST00000495100 GALNT14Q96FL9 552 aa11.39□□□□□ -0.59
GPC1-209ENST00000495100 C1QTNF5Q9BXJ0 243 aa11.39□□□□□ -0.59
GPC1-209ENST00000495100 TOLLIPQ9H0E2 274 aa11.39□□□□□ -0.59
GPC1-209ENST00000495100 UNKLQ9H9P5 680 aaKnown RBP11.39□□□□□ -0.59
GPC1-209ENST00000495100 ZNF71Q9NQZ8 489 aaPredicted RBP11.39□□□□□ -0.59
GPC1-209ENST00000495100 SERTAD4Q9NUC0 356 aa11.39□□□□□ -0.59
GPC1-209ENST00000495100 C17orf98A8MV24 154 aa11.39□□□□□ -0.59
GPC1-209ENST00000495100 DFFBO76075 338 aa11.39□□□□□ -0.59
GPC1-209ENST00000495100 HBZP02008 142 aa11.39□□□□□ -0.59
GPC1-209ENST00000495100 HOXA1P49639 335 aaPredicted RBP11.39□□□□□ -0.59
GPC1-209ENST00000495100 THBS3P49746 956 aa11.39□□□□□ -0.59
GPC1-209ENST00000495100 ASPHD1Q5U4P2 390 aa11.39□□□□□ -0.59
GPC1-209ENST00000495100 LHFPL4Q7Z7J7 247 aa11.39□□□□□ -0.59
GPC1-209ENST00000495100 Q8WTZ3 238 aa11.39□□□□□ -0.59
GPC1-209ENST00000495100 H1FXQ92522 213 aaKnown RBP11.39□□□□□ -0.59
GPC1-209ENST00000495100 FAM122AQ96E09 287 aa11.39□□□□□ -0.59
GPC1-209ENST00000495100 FAM210BQ96KR6 192 aa11.39□□□□□ -0.59
GPC1-209ENST00000495100 PQLC2LA1A4F0 135 aa11.39□□□□□ -0.59
GPC1-209ENST00000495100 H7BYZ3 331 aa11.39□□□□□ -0.59
GPC1-209ENST00000495100 IL18BPO95998 194 aa11.39□□□□□ -0.59
GPC1-209ENST00000495100 TRIP6Q15654 476 aaKnown RBP11.39□□□□□ -0.59
GPC1-209ENST00000495100 RNF212Q495C1 297 aa11.39□□□□□ -0.59
GPC1-209ENST00000495100 C15orf54Q8N8G6 183 aa11.39□□□□□ -0.59
GPC1-209ENST00000495100 TMEM178AQ8NBL3 297 aa11.39□□□□□ -0.59
GPC1-209ENST00000495100 OR4A16Q8NH70 328 aa11.39□□□□□ -0.59
GPC1-209ENST00000495100 KLF14Q8TD94 323 aaPredicted RBP11.39□□□□□ -0.59
GPC1-209ENST00000495100 SPRR3Q9UBC9 169 aa11.39□□□□□ -0.59
GPC1-209ENST00000495100 POLDIP2Q9Y2S7 368 aa11.39□□□□□ -0.59
GPC1-209ENST00000495100 CLN5O75503 358 aa11.38□□□□□ -0.59
GPC1-209ENST00000495100 DKK1O94907 266 aa11.38□□□□□ -0.59
GPC1-209ENST00000495100 CFPP27918 469 aa11.38□□□□□ -0.59
GPC1-209ENST00000495100 TFF3Q07654 80 aa11.38□□□□□ -0.59
GPC1-209ENST00000495100 RPL39P5Q59GN2 51 aa11.38□□□□□ -0.59
GPC1-209ENST00000495100 ZNF66Q6ZN08 573 aa11.38□□□□□ -0.59
GPC1-209ENST00000495100 OR10G4Q8NGN3 311 aa11.38□□□□□ -0.59
GPC1-209ENST00000495100 OR10G9Q8NGN4 311 aa11.38□□□□□ -0.59
GPC1-209ENST00000495100 OR10G7Q8NGN6 311 aa11.38□□□□□ -0.59
GPC1-209ENST00000495100 OR5P3Q8WZ94 311 aa11.38□□□□□ -0.59
GPC1-209ENST00000495100 POM121Q96HA1 1249 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms