RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 HES3Q5TGS1 186 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 TBPL2Q6SJ96 375 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 FAM131AQ6UXB0 335 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 RASSF6Q6ZTQ3 369 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 COMMD7Q86VX2 200 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 STX12Q86Y82 276 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 DOLPP1Q86YN1 238 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 CLVS1Q8IUQ0 354 aaPredicted RBP1.33□□□□□ -2.2
LMNB1-207ENST00000494185 TRAPPC5Q8IUR0 188 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 GID4Q8IVV7 300 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 TMEM75Q8N9X5 138 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 OR2V1Q8NHB1 315 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 OR10J5Q8NHC4 309 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 ZNRF2Q8NHG8 242 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 SPPL2BQ8TCT7 592 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 MAL2Q969L2 176 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 OTUB2Q96DC9 234 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 RMI2Q96E14 147 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 IMP4Q96G21 291 aaKnown RBP1.33□□□□□ -2.2
LMNB1-207ENST00000494185 SLC35G5Q96KT7 338 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 PRAP1Q96NZ9 151 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 SELENOSQ9BQE4 189 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 TRIM4Q9C037 500 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 OR2D2Q9H210 308 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 OR51I2Q9H344 312 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 ZNF286AQ9HBT8 521 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 SLC2A9Q9NRM0 540 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 LSM5Q9Y4Y9 91 aaKnown RBP1.33□□□□□ -2.2
LMNB1-207ENST00000494185 TRAPPC1Q9Y5R8 145 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 ALG5Q9Y673 324 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 SMARCA2P51531 1590 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 DOCK8Q8NF50 2099 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 COL1A2P08123 1366 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 SNAPC4Q5SXM2 1469 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 BAZ1BQ9UIG0 1483 aaKnown RBP1.32□□□□□ -2.2
LMNB1-207ENST00000494185 ANKRD12Q6UB98 2062 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 ZNF98A6NK75 572 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 A8MUU9 505 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 TMEM114B3SHH9 223 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 B4DEV8 164 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 DISC1C4P0D8 188 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 H0YJX3 145 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 KPNA3O00505 521 aaPredicted RBP1.32□□□□□ -2.2
LMNB1-207ENST00000494185 STK16O75716 305 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 KRT75O95678 551 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 TCRBP04435 133 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 FABP1P07148 127 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 RPS17P08708 135 aaKnown RBP1.32□□□□□ -2.2
LMNB1-207ENST00000494185 TFPTP0C1Z6 253 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 OR5G3P0C626 314 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 OR13C7P0DN81 318 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 OR12D1P0DN82 309 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 UCHL3P15374 230 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 CBR1P16152 277 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 ZNF14P17017 642 aaPredicted RBP1.32□□□□□ -2.2
LMNB1-207ENST00000494185 CXCL3P19876 107 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 ALOX5APP20292 161 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 S100A1P23297 94 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 G0S2P27469 103 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 CRABP2P29373 138 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 OPRM1P35372 400 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 CAPZBP47756 277 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 SULT1A1P50225 295 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 SULT1A2P50226 295 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 TCL1AP56279 114 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 RAB14P61106 215 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 NAA20P61599 178 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 HLA-DRB3P79483 266 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 EMX1Q04741 257 aaPredicted RBP1.32□□□□□ -2.2
LMNB1-207ENST00000494185 AESQ08117 197 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 MAPK14Q16539 360 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 LRRC75BQ2VPJ9 315 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 TMEM69Q5SWH9 247 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 PRR9Q5T870 116 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 C1orf195Q5TG92 126 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 FAM78BQ5VT40 261 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 SFXN4Q6P4A7 337 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 SPINT4Q6UDR6 99 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 Q6ZQT7 251 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 C3orf62Q6ZUJ4 267 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 CCDC121Q6ZUS5 278 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 TCF23Q7RTU1 214 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 NAA40Q86UY6 237 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 C1orf158Q8N1D5 194 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 LRRC25Q8N386 305 aaPredicted RBP1.32□□□□□ -2.2
LMNB1-207ENST00000494185 TBC1D19Q8N5T2 526 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 ZNF709Q8N972 641 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 OR4A5Q8NH83 315 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 MFSD8Q8NHS3 518 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 Q8WTZ3 238 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 EEF1AKMT1Q8WVE0 214 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 ASB17Q8WXJ9 295 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 ABHD14BQ96IU4 210 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 EBNA1BP2Q99848 306 aaKnown RBP1.32□□□□□ -2.2
LMNB1-207ENST00000494185 MED28Q9H204 178 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 XPNPEP1Q9NQW7 623 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 ZNF586Q9NXT0 402 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 VPS29Q9UBQ0 182 aa1.32□□□□□ -2.2
LMNB1-207ENST00000494185 RPUSD1Q9UJJ7 312 aaKnown RBP1.32□□□□□ -2.2
LMNB1-207ENST00000494185 PAIP2BQ9ULR5 123 aaKnown RBP1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 589.8 ms