RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 RNASEK-C17orf49H0YIS7 233 aa10.87□□□□□ -0.67
SEC13-216ENST00000479868 SPRY3O43610 288 aa10.87□□□□□ -0.67
SEC13-216ENST00000479868 RAMP3O60896 148 aa10.87□□□□□ -0.67
SEC13-216ENST00000479868 CD5P06127 495 aa10.87□□□□□ -0.67
SEC13-216ENST00000479868 ATP6V0CP27449 155 aa10.87□□□□□ -0.67
SEC13-216ENST00000479868 CCKARP32238 428 aa10.87□□□□□ -0.67
SEC13-216ENST00000479868 CD80P33681 288 aa10.87□□□□□ -0.67
SEC13-216ENST00000479868 CAMLGP49069 296 aa10.87□□□□□ -0.67
SEC13-216ENST00000479868 RPL30P62888 115 aaKnown RBP10.87□□□□□ -0.67
SEC13-216ENST00000479868 EIF4EBP1Q13541 118 aaPredicted RBP10.87□□□□□ -0.67
SEC13-216ENST00000479868 MOGAT3Q86VF5 341 aa10.87□□□□□ -0.67
SEC13-216ENST00000479868 DOLPP1Q86YN1 238 aa10.87□□□□□ -0.67
SEC13-216ENST00000479868 SVBPQ8N300 66 aa10.87□□□□□ -0.67
SEC13-216ENST00000479868 CISD2Q8N5K1 135 aaKnown RBP10.87□□□□□ -0.67
SEC13-216ENST00000479868 Q8NA96 180 aa10.87□□□□□ -0.67
SEC13-216ENST00000479868 NINJ1Q92982 152 aa10.87□□□□□ -0.67
SEC13-216ENST00000479868 MEGF10Q96KG7 1140 aa10.87□□□□□ -0.67
SEC13-216ENST00000479868 TOLLIPQ9H0E2 274 aa10.87□□□□□ -0.67
SEC13-216ENST00000479868 SSUH2Q9Y2M2 353 aa10.87□□□□□ -0.67
SEC13-216ENST00000479868 A6NJY4 79 aa10.87□□□□□ -0.67
SEC13-216ENST00000479868 DEFB108AA8MXU0 73 aa10.87□□□□□ -0.67
SEC13-216ENST00000479868 PRH1P02810 166 aa10.87□□□□□ -0.67
SEC13-216ENST00000479868 BAXQ07812 192 aa10.87□□□□□ -0.67
SEC13-216ENST00000479868 OR2B11Q5JQS5 317 aa10.87□□□□□ -0.67
SEC13-216ENST00000479868 SPACA3Q8IXA5 215 aa10.87□□□□□ -0.67
SEC13-216ENST00000479868 SPAG16Q8N0X2 631 aa10.87□□□□□ -0.67
SEC13-216ENST00000479868 OR10Z1Q8NGY1 313 aa10.87□□□□□ -0.67
SEC13-216ENST00000479868 LURAP1Q96LR2 239 aa10.87□□□□□ -0.67
SEC13-216ENST00000479868 SEC11CQ9BY50 192 aa10.87□□□□□ -0.67
SEC13-216ENST00000479868 DSCAMO60469 2012 aa10.86□□□□□ -0.67
SEC13-216ENST00000479868 A0A0G2JNJ9 132 aa10.86□□□□□ -0.67
SEC13-216ENST00000479868 TSPAN15O95858 294 aa10.86□□□□□ -0.67
SEC13-216ENST00000479868 SFTA3P0C7M3 94 aa10.86□□□□□ -0.67
SEC13-216ENST00000479868 CFHR2P36980 270 aa10.86□□□□□ -0.67
SEC13-216ENST00000479868 BTNL3Q6UXE8 466 aa10.86□□□□□ -0.67
SEC13-216ENST00000479868 FGFRL1Q8N441 504 aa10.86□□□□□ -0.67
SEC13-216ENST00000479868 ARL6IP6Q8N6S5 226 aa10.86□□□□□ -0.67
SEC13-216ENST00000479868 ITLN1Q8WWA0 313 aa10.86□□□□□ -0.67
SEC13-216ENST00000479868 MRPL37Q9BZE1 423 aaKnown RBP10.86□□□□□ -0.67
SEC13-216ENST00000479868 C19orf12Q9NSK7 152 aa10.86□□□□□ -0.67
SEC13-216ENST00000479868 Q9UFV3 132 aa10.86□□□□□ -0.67
SEC13-216ENST00000479868 RNF212BA8MTL3 300 aa10.85□□□□□ -0.67
SEC13-216ENST00000479868 FAM157AC9JC47 383 aa10.85□□□□□ -0.67
SEC13-216ENST00000479868 C15orf65H3BRN8 121 aa10.85□□□□□ -0.67
SEC13-216ENST00000479868 TXNL1O43396 289 aa10.85□□□□□ -0.67
SEC13-216ENST00000479868 SYNGR2O43760 224 aa10.85□□□□□ -0.67
SEC13-216ENST00000479868 SNCAP37840 140 aa10.85□□□□□ -0.67
SEC13-216ENST00000479868 RAB5CP51148 216 aa10.85□□□□□ -0.67
SEC13-216ENST00000479868 BRWD1-AS2P59051 145 aa10.85□□□□□ -0.67
SEC13-216ENST00000479868 BPIFB3P59826 476 aa10.85□□□□□ -0.67
SEC13-216ENST00000479868 PAX5Q02548 391 aa10.85□□□□□ -0.67
SEC13-216ENST00000479868 TMEM267Q0VDI3 215 aaPredicted RBP10.85□□□□□ -0.67
SEC13-216ENST00000479868 TMEM95Q3KNT9 176 aa10.85□□□□□ -0.67
SEC13-216ENST00000479868 FAM201AQ5SY85 155 aa10.85□□□□□ -0.67
SEC13-216ENST00000479868 ZBTB34Q8NCN2 500 aa10.85□□□□□ -0.67
SEC13-216ENST00000479868 ZNRF1Q8ND25 227 aa10.85□□□□□ -0.67
SEC13-216ENST00000479868 OR2G3Q8NGZ4 309 aa10.85□□□□□ -0.67
SEC13-216ENST00000479868 RAB40CQ96S21 281 aa10.85□□□□□ -0.67
SEC13-216ENST00000479868 SCNM1Q9BWG6 230 aa10.85□□□□□ -0.67
SEC13-216ENST00000479868 ADGRG4Q8IZF6 3080 aa10.85□□□□□ -0.67
SEC13-216ENST00000479868 K7N7A8 449 aa10.85□□□□□ -0.67
SEC13-216ENST00000479868 IAPPP10997 89 aa10.85□□□□□ -0.67
SEC13-216ENST00000479868 CD40P25942 277 aa10.85□□□□□ -0.67
SEC13-216ENST00000479868 DVL1P1P54792 670 aaPredicted RBP10.85□□□□□ -0.67
SEC13-216ENST00000479868 LINC00205P59089 165 aa10.85□□□□□ -0.67
SEC13-216ENST00000479868 RPL23AP62750 156 aaKnown RBP10.85□□□□□ -0.67
SEC13-216ENST00000479868 RUNX1Q01196 453 aa10.85□□□□□ -0.67
SEC13-216ENST00000479868 LTC4SQ16873 150 aa10.85□□□□□ -0.67
SEC13-216ENST00000479868 SH3BGRL2Q9UJC5 107 aa10.85□□□□□ -0.67
SEC13-216ENST00000479868 STRAPQ9Y3F4 350 aaKnown RBP10.85□□□□□ -0.67
SEC13-216ENST00000479868 WSB1Q9Y6I7 421 aa10.85□□□□□ -0.67
SEC13-216ENST00000479868 PRRG2O14669 202 aa10.84□□□□□ -0.67
SEC13-216ENST00000479868 LHBP01229 141 aa10.84□□□□□ -0.67
SEC13-216ENST00000479868 SULT1A1P50225 295 aa10.84□□□□□ -0.67
SEC13-216ENST00000479868 ZNF816Q0VGE8 651 aaPredicted RBP10.84□□□□□ -0.67
SEC13-216ENST00000479868 STX12Q86Y82 276 aa10.84□□□□□ -0.67
SEC13-216ENST00000479868 FAM90A1Q86YD7 464 aa10.84□□□□□ -0.67
SEC13-216ENST00000479868 FAM213BQ8TBF2 198 aa10.84□□□□□ -0.67
SEC13-216ENST00000479868 AGMATQ9BSE5 352 aa10.84□□□□□ -0.67
SEC13-216ENST00000479868 ABHD14AQ9BUJ0 271 aa10.84□□□□□ -0.67
SEC13-216ENST00000479868 SCRT1Q9BWW7 348 aa10.84□□□□□ -0.67
SEC13-216ENST00000479868 ODAMA1E959 279 aa10.84□□□□□ -0.67
SEC13-216ENST00000479868 C17orf98A8MV24 154 aa10.84□□□□□ -0.67
SEC13-216ENST00000479868 ST8SIA5O15466 376 aa10.84□□□□□ -0.67
SEC13-216ENST00000479868 SPINT2O43291 252 aa10.84□□□□□ -0.67
SEC13-216ENST00000479868 KRASP01116 189 aa10.84□□□□□ -0.67
SEC13-216ENST00000479868 CTRB1P17538 263 aa10.84□□□□□ -0.67
SEC13-216ENST00000479868 ATF4P18848 351 aaPredicted RBP10.84□□□□□ -0.67
SEC13-216ENST00000479868 BTF3P20290 206 aaKnown RBP10.84□□□□□ -0.67
SEC13-216ENST00000479868 G6PCP35575 357 aa10.84□□□□□ -0.67
SEC13-216ENST00000479868 NPBWR1P48145 328 aa10.84□□□□□ -0.67
SEC13-216ENST00000479868 CTRB2Q6GPI1 263 aa10.84□□□□□ -0.67
SEC13-216ENST00000479868 PLPPR2Q96GM1 343 aa10.84□□□□□ -0.67
SEC13-216ENST00000479868 ATP5SQ99766 215 aa10.84□□□□□ -0.67
SEC13-216ENST00000479868 KCNJ16Q9NPI9 418 aa10.84□□□□□ -0.67
SEC13-216ENST00000479868 PSG11Q9UQ72 335 aa10.84□□□□□ -0.67
SEC13-216ENST00000479868 ROS1P08922 2347 aa10.83□□□□□ -0.68
SEC13-216ENST00000479868 A0A1B0GV50 99 aa10.83□□□□□ -0.68
SEC13-216ENST00000479868 LINC00473A8K010 186 aa10.83□□□□□ -0.68
SEC13-216ENST00000479868 S1PR2O95136 353 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 244.7 ms