RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 KLF5Q13887 457 aaPredicted RBP3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 ATP6AP1Q15904 470 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 MORN2Q502X0 79 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 AKIRIN2Q53H80 203 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 ATAD3CQ5T2N8 411 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 C6orf183Q5T699 404 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 LCE1DQ5T752 114 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 LCN12Q6JVE5 192 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 FAM131AQ6UXB0 335 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 PPP1R27Q86WC6 154 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 Q8N402 240 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 STX19Q8N4C7 294 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 ACBD7Q8N6N7 88 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 LFNGQ8NES3 379 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 OR9G4Q8NGQ1 327 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 OR4K15Q8NH41 348 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 OR5AK2Q8NH90 309 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 TSEN15Q8WW01 171 aaKnown RBP3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 RGP1Q92546 391 aaPredicted RBP3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 TMEM106AQ96A25 262 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 CYYR1Q96J86 154 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 MS4A10Q96PG2 267 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 FANCD2OSQ96PS1 177 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 FAM103A1Q9BTL3 118 aaKnown RBP3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 METTL9Q9H1A3 318 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 FBXL15Q9H469 300 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 SLA2Q9H6Q3 261 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 ISG20L2Q9H9L3 353 aaKnown RBP3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 PLEKHA3Q9HB20 300 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 TAF9BQ9HBM6 251 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 RANGRFQ9HD47 186 aaPredicted RBP3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 OR2S2Q9NQN1 319 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 MBNL3Q9NUK0 354 aaKnown RBP3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 PAK1IP1Q9NWT1 392 aaPredicted RBP3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 TAS2R4Q9NYW5 299 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 SIGLEC8Q9NYZ4 499 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 TRAPPC2LQ9UL33 140 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 HERC1Q15751 4861 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 E9PI62 339 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 SC5DO75845 299 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 TRBV12-3P01733 135 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 TRGV3P03979 118 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 TFAP2AP05549 437 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 CSN3P07498 182 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 GTF2F2P13984 249 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 CD40LGP29965 261 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 ZNF93P35789 620 aaPredicted RBP3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 SOX2P48431 317 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 ALDH3A2P51648 485 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 CD81P60033 236 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 GNGT1P63211 74 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 PLGLAQ15195 96 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 MOGAT2Q3SYC2 334 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 SLC22A6Q4U2R8 563 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 SLC25A30Q5SVS4 291 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 DDI2Q5TDH0 399 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 RAB12Q6IQ22 244 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 FAM71F2Q6NXP2 309 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 TRAT1Q6PIZ9 186 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 UNQ5815/PRO19632Q6UWF5 114 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 ZNF562Q6V9R5 426 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 C5orf24Q7Z6I8 188 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 ZNF554Q86TJ5 538 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 LHFPL3Q86UP9 236 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 SYS1Q8N2H4 156 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 POC5Q8NA72 575 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 OR52L2PQ8NGH6 319 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 ABHD5Q8WTS1 349 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 TRUB1Q8WWH5 349 aaKnown RBP3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 LGALS12Q96DT0 336 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 MRPL48Q96GC5 212 aaKnown RBP3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 RDH12Q96NR8 316 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 ST6GALNAC5Q9BVH7 336 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 ALG8Q9BVK2 526 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 JAM3Q9BX67 310 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 WFDC10AQ9H1F0 79 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 IFI27L2Q9H2X8 130 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 SPACA1Q9HBV2 294 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 TMEM138Q9NPI0 162 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 IMPAD1Q9NX62 359 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 ETAA1Q9NY74 926 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 FAM53CQ9NYF3 392 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 PRR13Q9NZ81 148 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 JPT1Q9UK76 154 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 RNF150Q9ULK6 438 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 ING4Q9UNL4 249 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 POMPQ9Y244 141 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 EXOGQ9Y2C4 368 aaKnown RBP3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 GMPPBQ9Y5P6 360 aa3.88□□□□□ -1.79
SNRNP40-204ENST00000474025 APOBP04114 4563 aaKnown RBP3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 A0A0G2JLM5 398 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 C13orf42A0A1B0GVH6 325 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 OR5H14A6NHG9 310 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 MCRIP1C9JLW8 97 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 H0YJW9 148 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 H3BUA1 57 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 YPEL1O60688 119 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 ZNF780AO75290 641 aaPredicted RBP3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 CA11O75493 328 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 TPPPO94811 219 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms