RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 ACTBP60709 375 aa17.11■□□□□ 0.33
LIME1-203ENST00000465591 RPL39P5Q59GN2 51 aa17.11■□□□□ 0.33
LIME1-203ENST00000465591 TSPAN14Q8NG11 270 aa17.11■□□□□ 0.33
LIME1-203ENST00000465591 VCX3AQ9NNX9 186 aa17.11■□□□□ 0.33
LIME1-203ENST00000465591 C12orf4Q9NQ89 552 aa17.11■□□□□ 0.33
LIME1-203ENST00000465591 SLC23A1Q9UHI7 598 aa17.11■□□□□ 0.33
LIME1-203ENST00000465591 IGKV1-6A0A0C4DH72 117 aa17.1■□□□□ 0.33
LIME1-203ENST00000465591 PSMB9P28065 219 aa17.1■□□□□ 0.33
LIME1-203ENST00000465591 PSMD7P51665 324 aa17.1■□□□□ 0.33
LIME1-203ENST00000465591 SLC35B1P78383 322 aa17.1■□□□□ 0.33
LIME1-203ENST00000465591 MMDQ15546 238 aa17.1■□□□□ 0.33
LIME1-203ENST00000465591 FOXB2Q5VYV0 432 aa17.1■□□□□ 0.33
LIME1-203ENST00000465591 C22orf42Q6IC83 251 aa17.1■□□□□ 0.33
LIME1-203ENST00000465591 C8orf86Q6ZUL3 223 aa17.1■□□□□ 0.33
LIME1-203ENST00000465591 LINC00482Q8N8I6 264 aa17.1■□□□□ 0.33
LIME1-203ENST00000465591 OR56B1Q8NGI3 324 aa17.1■□□□□ 0.33
LIME1-203ENST00000465591 ABHD14BQ96IU4 210 aa17.1■□□□□ 0.33
LIME1-203ENST00000465591 CMSS1Q9BQ75 279 aaKnown RBP17.1■□□□□ 0.33
LIME1-203ENST00000465591 AGMATQ9BSE5 352 aa17.1■□□□□ 0.33
LIME1-203ENST00000465591 SMIM30A4D0T7 59 aa17.09■□□□□ 0.33
LIME1-203ENST00000465591 IFITM5A6NNB3 132 aa17.09■□□□□ 0.33
LIME1-203ENST00000465591 PDCD5O14737 125 aa17.09■□□□□ 0.33
LIME1-203ENST00000465591 SOX6P35712 828 aa17.09■□□□□ 0.33
LIME1-203ENST00000465591 CFHR3Q02985 330 aa17.09■□□□□ 0.33
LIME1-203ENST00000465591 GLDNQ6ZMI3 551 aaPredicted RBP17.09■□□□□ 0.33
LIME1-203ENST00000465591 C11orf54Q9H0W9 315 aaPredicted RBP17.09■□□□□ 0.33
LIME1-203ENST00000465591 RAB22AQ9UL26 194 aa17.09■□□□□ 0.33
LIME1-203ENST00000465591 RPLP1P05386 114 aaKnown RBP17.08■□□□□ 0.32
LIME1-203ENST00000465591 CT45A6P0DMU7 189 aa17.08■□□□□ 0.32
LIME1-203ENST00000465591 CT45A5P0DMU8 189 aa17.08■□□□□ 0.32
LIME1-203ENST00000465591 CT45A7P0DMV0 189 aa17.08■□□□□ 0.32
LIME1-203ENST00000465591 MYL9P24844 172 aa17.08■□□□□ 0.32
LIME1-203ENST00000465591 CEACAM6P40199 344 aa17.08■□□□□ 0.32
LIME1-203ENST00000465591 THBS3P49746 956 aa17.08■□□□□ 0.32
LIME1-203ENST00000465591 PNLIPRP3Q17RR3 467 aa17.08■□□□□ 0.32
LIME1-203ENST00000465591 FAM131AQ6UXB0 335 aa17.08■□□□□ 0.32
LIME1-203ENST00000465591 MRPL41Q8IXM3 137 aaKnown RBP17.08■□□□□ 0.32
LIME1-203ENST00000465591 COMMD1Q8N668 190 aa17.08■□□□□ 0.32
LIME1-203ENST00000465591 KLHL30-AS1Q8NEE0 82 aa17.08■□□□□ 0.32
LIME1-203ENST00000465591 ZFP57Q9NU63 452 aa17.08■□□□□ 0.32
LIME1-203ENST00000465591 ZNF107Q9UII5 783 aaPredicted RBP17.08■□□□□ 0.32
LIME1-203ENST00000465591 RAB27BO00194 218 aa17.07■□□□□ 0.32
LIME1-203ENST00000465591 ITGB1BP1O14713 200 aa17.07■□□□□ 0.32
LIME1-203ENST00000465591 RAB29O14966 203 aa17.07■□□□□ 0.32
LIME1-203ENST00000465591 PROP1O75360 226 aa17.07■□□□□ 0.32
LIME1-203ENST00000465591 RAB3BP20337 219 aa17.07■□□□□ 0.32
LIME1-203ENST00000465591 NEDD8Q15843 81 aa17.07■□□□□ 0.32
LIME1-203ENST00000465591 FAM71F2Q6NXP2 309 aa17.07■□□□□ 0.32
LIME1-203ENST00000465591 TEX38Q6PEX7 206 aa17.07■□□□□ 0.32
LIME1-203ENST00000465591 DUX3Q96PT4 197 aa17.07■□□□□ 0.32
LIME1-203ENST00000465591 NECAP2Q9NVZ3 263 aa17.07■□□□□ 0.32
LIME1-203ENST00000465591 AURKAIP1Q9NWT8 199 aaPredicted RBP17.07■□□□□ 0.32
LIME1-203ENST00000465591 PIPOXQ9P0Z9 390 aa17.07■□□□□ 0.32
LIME1-203ENST00000465591 NUDT19A8MXV4 375 aa17.06■□□□□ 0.32
LIME1-203ENST00000465591 NBR2O15453 112 aa17.06■□□□□ 0.32
LIME1-203ENST00000465591 IGF1P05019 195 aa17.06■□□□□ 0.32
LIME1-203ENST00000465591 GALP22466 123 aa17.06■□□□□ 0.32
LIME1-203ENST00000465591 ZBTB25P24278 435 aa17.06■□□□□ 0.32
LIME1-203ENST00000465591 RAB3CQ96E17 227 aa17.06■□□□□ 0.32
LIME1-203ENST00000465591 TXNL4BQ9NX01 149 aaKnown RBP17.06■□□□□ 0.32
LIME1-203ENST00000465591 RNF150Q9ULK6 438 aa17.06■□□□□ 0.32
LIME1-203ENST00000465591 MGAT4AQ9UM21 535 aa17.06■□□□□ 0.32
LIME1-203ENST00000465591 IGHV7-81A0A0B4J1V7 117 aa17.05■□□□□ 0.32
LIME1-203ENST00000465591 TRDCB7Z8K6 153 aa17.05■□□□□ 0.32
LIME1-203ENST00000465591 H0YJW9 148 aa17.05■□□□□ 0.32
LIME1-203ENST00000465591 MFNGO00587 321 aa17.05■□□□□ 0.32
LIME1-203ENST00000465591 HSPA12AO43301 675 aa17.05■□□□□ 0.32
LIME1-203ENST00000465591 CD3GP09693 182 aa17.05■□□□□ 0.32
LIME1-203ENST00000465591 SNRPBP14678 240 aaKnown RBP17.05■□□□□ 0.32
LIME1-203ENST00000465591 GNB3P16520 340 aa17.05■□□□□ 0.32
LIME1-203ENST00000465591 LINC00205P59089 165 aa17.05■□□□□ 0.32
LIME1-203ENST00000465591 C5orf64Q2M2E5 130 aa17.05■□□□□ 0.32
LIME1-203ENST00000465591 ZNF695Q8IW36 515 aa17.05■□□□□ 0.32
LIME1-203ENST00000465591 RNF152Q8N8N0 203 aa17.05■□□□□ 0.32
LIME1-203ENST00000465591 NPBQ8NG41 125 aa17.05■□□□□ 0.32
LIME1-203ENST00000465591 OR10R2Q8NGX6 335 aa17.05■□□□□ 0.32
LIME1-203ENST00000465591 PTX4Q96A99 478 aa17.05■□□□□ 0.32
LIME1-203ENST00000465591 RCC1LQ96I51 464 aaKnown RBP17.05■□□□□ 0.32
LIME1-203ENST00000465591 KCTD7Q96MP8 289 aa17.05■□□□□ 0.32
LIME1-203ENST00000465591 P2RX4Q99571 388 aa17.05■□□□□ 0.32
LIME1-203ENST00000465591 G3V318 75 aa17.04■□□□□ 0.32
LIME1-203ENST00000465591 NDUFA3O95167 84 aa17.04■□□□□ 0.32
LIME1-203ENST00000465591 IGHG4P01861 327 aa17.04■□□□□ 0.32
LIME1-203ENST00000465591 HLA-DRB1P01911 266 aa17.04■□□□□ 0.32
LIME1-203ENST00000465591 FCGR3AP08637 254 aa17.04■□□□□ 0.32
LIME1-203ENST00000465591 RAB6AP20340 208 aa17.04■□□□□ 0.32
LIME1-203ENST00000465591 FOXE3Q13461 319 aa17.04■□□□□ 0.32
LIME1-203ENST00000465591 DRAXINQ8NBI3 349 aaPredicted RBP17.04■□□□□ 0.32
LIME1-203ENST00000465591 MAFIPQ8WZ33 124 aa17.04■□□□□ 0.32
LIME1-203ENST00000465591 RAX2Q96IS3 184 aa17.04■□□□□ 0.32
LIME1-203ENST00000465591 ZNF580Q9UK33 172 aa17.04■□□□□ 0.32
LIME1-203ENST00000465591 ELF5Q9UKW6 265 aaPredicted RBP17.04■□□□□ 0.32
LIME1-203ENST00000465591 WSB1Q9Y6I7 421 aa17.04■□□□□ 0.32
LIME1-203ENST00000465591 A0A075B6Q4 140 aa17.03■□□□□ 0.32
LIME1-203ENST00000465591 ATP6V0E1O15342 81 aa17.03■□□□□ 0.32
LIME1-203ENST00000465591 ELANEP08246 267 aa17.03■□□□□ 0.32
LIME1-203ENST00000465591 VDAC1P21796 283 aa17.03■□□□□ 0.32
LIME1-203ENST00000465591 FGF9P31371 208 aaPredicted RBP17.03■□□□□ 0.32
LIME1-203ENST00000465591 KRTAP10-11P60412 298 aa17.03■□□□□ 0.32
LIME1-203ENST00000465591 NDPQ00604 133 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms