RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 H0YHG0 523 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 CRTAPO75718 401 aaPredicted RBP3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 MOSP00540 346 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 MYL12AP19105 171 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 CD1BP29016 333 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 SOX6P35712 828 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 OR3A3P47888 321 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 KRTAP10-2P60368 255 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 PAX5Q02548 391 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 ST3GAL4Q11206 333 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 KIAA0141Q14154 515 aaPredicted RBP3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 INSL4Q14641 139 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 GNMTQ14749 295 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 KIR2DS1Q14954 304 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 ZNF260Q3ZCT1 412 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 Q499Y3 187 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 NHLRC3Q5JS37 347 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 AWAT2Q6E213 333 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 OR10K2Q6IF99 312 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 RAB12Q6IQ22 244 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 SLC25A48Q6ZT89 311 aaKnown RBP3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 ODF3L1Q8IXM7 274 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 STX19Q8N4C7 294 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 LINC00311Q8N616 119 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 COMMD1Q8N668 190 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 ZNF485Q8NCK3 441 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 ZNF439Q8NDP4 499 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 OR11H1Q8NG94 326 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 OR52M1Q8NGK5 317 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 DPF1Q92782 380 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 FAM46BQ96A09 425 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 SMIM19Q96E16 107 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 CPNE2Q96FN4 548 aaPredicted RBP3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 PGLYRP3Q96LB9 341 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 KCTD7Q96MP8 289 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 B9D2Q9BPU9 175 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 FAAP24Q9BTP7 215 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 MCRIP2Q9BUT9 160 aaKnown RBP3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 ALX4Q9H161 411 aaPredicted RBP3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 KCNK15Q9H427 330 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 GNB4Q9HAV0 340 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 TAF9BQ9HBM6 251 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 OR2S2Q9NQN1 319 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 LIN7CQ9NUP9 197 aaKnown RBP3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 PAK1IP1Q9NWT1 392 aaPredicted RBP3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 CHCHD3Q9NX63 227 aaKnown RBP3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 SMPD3Q9NY59 655 aaPredicted RBP3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 IL36GQ9NZH8 169 aa3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 DIMT1Q9UNQ2 313 aaKnown RBP3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 LSM4Q9Y4Z0 139 aaKnown RBP3.65□□□□□ -1.83
GTF3C3-208ENST00000455546 DNAH9Q9NYC9 4486 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 TRBV5-7A0A0A0MS05 114 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 KRTAP9-7A8MTY7 169 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 H0YIZ8 118 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 FCN1O00602 326 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 MPPED1O15442 326 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 SPINT2O43291 252 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 RAMP3O60896 148 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 ZNF780AO75290 641 aaPredicted RBP3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 GPX5O75715 221 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 NXPH3O95157 252 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 IGHG4P01861 327 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 GNAO1P09471 354 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 MGMTP16455 207 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 CELP19835 753 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 FUT3P21217 361 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 VDAC1P21796 283 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 IL3RAP26951 378 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 PSMB8P28062 276 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 PPP1CCP36873 323 aaKnown RBP3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 CAPGP40121 348 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 CDX1P47902 265 aaPredicted RBP3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 FAM3BP58499 235 aaPredicted RBP3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 LINC00205P59089 165 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 ACTBP60709 375 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 GNB1P62873 340 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 CFHR3Q02985 330 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 FOXI1Q12951 378 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 GPR176Q14439 515 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 MMDQ15546 238 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 MPV17LQ2QL34 196 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 YIF1BQ5BJH7 314 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 FAM27D1Q5T7N8 215 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 LCE3BQ5TA77 95 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 ASPHD1Q5U4P2 390 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 LAIR2Q6ISS4 152 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 GLDNQ6ZMI3 551 aaPredicted RBP3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 Q6ZWC4 215 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 LINC00596Q86U02 117 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 LYPD6Q86Y78 171 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 C10orf67Q8IYJ2 551 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 DHRSXQ8N5I4 330 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 FAM71E2Q8N5Q1 922 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 ZNF491Q8N8L2 437 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 C8orf31Q8N9H6 132 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 BPIFB6Q8NFQ5 453 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 OR5M8Q8NGP6 311 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 OR1N2Q8NGR9 330 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 OR8U1Q8NH10 309 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms