RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 ZDHHC8Q9ULC8 765 aa10.43□□□□□ -0.74
UBR4-205ENST00000417040 TMEM189A5PLL7 270 aa10.43□□□□□ -0.74
UBR4-205ENST00000417040 VAX1Q5SQQ9 334 aa10.43□□□□□ -0.74
UBR4-205ENST00000417040 TMEM222Q9H0R3 208 aa10.43□□□□□ -0.74
UBR4-205ENST00000417040 UQCR10Q9UDW1 63 aa10.43□□□□□ -0.74
UBR4-205ENST00000417040 CXorf51AA0A1B0GTR3 108 aa10.42□□□□□ -0.74
UBR4-205ENST00000417040 KIR2DL1P43626 348 aaPredicted RBP10.42□□□□□ -0.74
UBR4-205ENST00000417040 KIR2DL2P43627 348 aaPredicted RBP10.42□□□□□ -0.74
UBR4-205ENST00000417040 MEF2BQ02080 365 aaPredicted RBP10.42□□□□□ -0.74
UBR4-205ENST00000417040 SPEM1Q8N4L4 309 aa10.42□□□□□ -0.74
UBR4-205ENST00000417040 SCN9AQ15858 1988 aa10.42□□□□□ -0.74
UBR4-205ENST00000417040 STAG3L2P0CL84 134 aa10.42□□□□□ -0.74
UBR4-205ENST00000417040 AGAP20933 346 aa10.42□□□□□ -0.74
UBR4-205ENST00000417040 PSG4Q00888 419 aa10.42□□□□□ -0.74
UBR4-205ENST00000417040 CADM4Q8NFZ8 388 aa10.42□□□□□ -0.74
UBR4-205ENST00000417040 ADTRPQ96IZ2 230 aa10.42□□□□□ -0.74
UBR4-205ENST00000417040 HIST1H4GQ99525 98 aa10.42□□□□□ -0.74
UBR4-205ENST00000417040 CISD1Q9NZ45 108 aaKnown RBP10.42□□□□□ -0.74
UBR4-205ENST00000417040 IGKV3D-15A0A087WSY6 115 aa10.42□□□□□ -0.74
UBR4-205ENST00000417040 LINC00587B1AMM8 73 aa10.42□□□□□ -0.74
UBR4-205ENST00000417040 C4orf51C9J302 202 aa10.42□□□□□ -0.74
UBR4-205ENST00000417040 ITGBL1O95965 494 aaPredicted RBP10.42□□□□□ -0.74
UBR4-205ENST00000417040 IGKV3-15P01624 115 aa10.42□□□□□ -0.74
UBR4-205ENST00000417040 IGHV3-48P01763 117 aa10.42□□□□□ -0.74
UBR4-205ENST00000417040 COX19Q49B96 90 aa10.42□□□□□ -0.74
UBR4-205ENST00000417040 Q8WTZ3 238 aa10.42□□□□□ -0.74
UBR4-205ENST00000417040 GRAMD2BQ96HH9 432 aa10.42□□□□□ -0.74
UBR4-205ENST00000417040 YBX2Q9Y2T7 364 aaKnown RBP10.42□□□□□ -0.74
UBR4-205ENST00000417040 ADAMTSL3P82987 1691 aa10.42□□□□□ -0.74
UBR4-205ENST00000417040 A0A0B4J293 547 aa10.42□□□□□ -0.74
UBR4-205ENST00000417040 C7orf71A4D174 169 aa10.42□□□□□ -0.74
UBR4-205ENST00000417040 TSPAN2O60636 221 aa10.42□□□□□ -0.74
UBR4-205ENST00000417040 HBZP02008 142 aa10.42□□□□□ -0.74
UBR4-205ENST00000417040 REG1AP05451 166 aa10.42□□□□□ -0.74
UBR4-205ENST00000417040 TMEM108Q6UXF1 575 aa10.42□□□□□ -0.74
UBR4-205ENST00000417040 OR4B1Q8NGF8 309 aa10.42□□□□□ -0.74
UBR4-205ENST00000417040 TAF15Q92804 592 aaKnown RBP eCLIP10.42□□□□□ -0.74
UBR4-205ENST00000417040 C14orf144Q96I85 54 aa10.42□□□□□ -0.74
UBR4-205ENST00000417040 AQP10Q96PS8 301 aa10.42□□□□□ -0.74
UBR4-205ENST00000417040 TMUB1Q9BVT8 246 aa10.42□□□□□ -0.74
UBR4-205ENST00000417040 SSBP3Q9BWW4 388 aaPredicted RBP10.42□□□□□ -0.74
UBR4-205ENST00000417040 LHX9Q9NQ69 397 aa10.42□□□□□ -0.74
UBR4-205ENST00000417040 THYN1Q9P016 225 aa10.42□□□□□ -0.74
UBR4-205ENST00000417040 TUBD1Q9UJT1 453 aa10.42□□□□□ -0.74
UBR4-205ENST00000417040 INSIG2Q9Y5U4 225 aa10.42□□□□□ -0.74
UBR4-205ENST00000417040 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.41□□□□□ -0.74
UBR4-205ENST00000417040 MPTX1A8MV57 137 aa10.41□□□□□ -0.74
UBR4-205ENST00000417040 FOXS1O43638 330 aa10.41□□□□□ -0.74
UBR4-205ENST00000417040 ZG16O60844 167 aa10.41□□□□□ -0.74
UBR4-205ENST00000417040 NUBP1P53384 320 aa10.41□□□□□ -0.74
UBR4-205ENST00000417040 SRSF3P84103 164 aaKnown RBP10.41□□□□□ -0.74
UBR4-205ENST00000417040 ZNF826PQ6ZT77 177 aa10.41□□□□□ -0.74
UBR4-205ENST00000417040 SHISA3A0PJX4 238 aa10.41□□□□□ -0.74
UBR4-205ENST00000417040 CEACAM18A8MTB9 384 aa10.41□□□□□ -0.74
UBR4-205ENST00000417040 MKRN2OSH3BPM6 223 aa10.41□□□□□ -0.74
UBR4-205ENST00000417040 J3QT63 122 aa10.41□□□□□ -0.74
UBR4-205ENST00000417040 GLIPR1P48060 266 aa10.41□□□□□ -0.74
UBR4-205ENST00000417040 TAS2R60P59551 318 aa10.41□□□□□ -0.74
UBR4-205ENST00000417040 KLK15Q9H2R5 256 aa10.41□□□□□ -0.74
UBR4-205ENST00000417040 H0Y980 276 aa10.41□□□□□ -0.74
UBR4-205ENST00000417040 ZNF324O75467 553 aaPredicted RBP10.41□□□□□ -0.74
UBR4-205ENST00000417040 CRYBB3P26998 211 aa10.41□□□□□ -0.74
UBR4-205ENST00000417040 LAMTOR1Q6IAA8 161 aa10.41□□□□□ -0.74
UBR4-205ENST00000417040 RHBDD2Q6NTF9 364 aa10.41□□□□□ -0.74
UBR4-205ENST00000417040 IMMP2LQ96T52 175 aa10.41□□□□□ -0.74
UBR4-205ENST00000417040 LPAR2Q9HBW0 351 aa10.41□□□□□ -0.74
UBR4-205ENST00000417040 AUP1Q9Y679 476 aa10.41□□□□□ -0.74
UBR4-205ENST00000417040 MYO9BQ13459 2157 aa10.41□□□□□ -0.74
UBR4-205ENST00000417040 C17orf51A8MQB3 221 aa10.41□□□□□ -0.74
UBR4-205ENST00000417040 LEPROTL1O95214 131 aa10.41□□□□□ -0.74
UBR4-205ENST00000417040 OR2H2O95918 312 aa10.41□□□□□ -0.74
UBR4-205ENST00000417040 SPEM2Q0P670 501 aa10.41□□□□□ -0.74
UBR4-205ENST00000417040 BIVMQ86UB2 503 aa10.41□□□□□ -0.74
UBR4-205ENST00000417040 ZNF645Q8N7E2 425 aa10.41□□□□□ -0.74
UBR4-205ENST00000417040 GAPDHP04406 335 aaKnown RBP10.41□□□□□ -0.74
UBR4-205ENST00000417040 CBLN1P23435 193 aa10.41□□□□□ -0.74
UBR4-205ENST00000417040 DEFB123Q8N688 67 aa10.41□□□□□ -0.74
UBR4-205ENST00000417040 SF3B5Q9BWJ5 86 aaKnown RBP10.41□□□□□ -0.74
UBR4-205ENST00000417040 NPVFQ9HCQ7 196 aa10.41□□□□□ -0.74
UBR4-205ENST00000417040 RABAC1Q9UI14 185 aa10.41□□□□□ -0.74
UBR4-205ENST00000417040 DICER1Q9UPY3 1922 aaKnown RBP10.41□□□□□ -0.74
UBR4-205ENST00000417040 NXPH1P58417 271 aa10.4□□□□□ -0.74
UBR4-205ENST00000417040 MESP2Q0VG99 397 aa10.4□□□□□ -0.74
UBR4-205ENST00000417040 CALHM1Q8IU99 346 aa10.4□□□□□ -0.74
UBR4-205ENST00000417040 DEFB124Q8NES8 71 aa10.4□□□□□ -0.74
UBR4-205ENST00000417040 LSM10Q969L4 123 aaKnown RBP10.4□□□□□ -0.74
UBR4-205ENST00000417040 RNF7Q9UBF6 113 aa10.4□□□□□ -0.74
UBR4-205ENST00000417040 PGPA6NDG6 321 aa10.4□□□□□ -0.74
UBR4-205ENST00000417040 MOSPD3O75425 235 aa10.4□□□□□ -0.74
UBR4-205ENST00000417040 CTSBP07858 339 aa10.4□□□□□ -0.74
UBR4-205ENST00000417040 HOXC4P09017 264 aaPredicted RBP10.4□□□□□ -0.74
UBR4-205ENST00000417040 LIFP15018 202 aa10.4□□□□□ -0.74
UBR4-205ENST00000417040 CKS2P33552 79 aa10.4□□□□□ -0.74
UBR4-205ENST00000417040 SERF2P84101 59 aa10.4□□□□□ -0.74
UBR4-205ENST00000417040 ZNF818PQ6ZRF7 136 aa10.4□□□□□ -0.74
UBR4-205ENST00000417040 VSTM2AQ8TAG5 236 aa10.4□□□□□ -0.74
UBR4-205ENST00000417040 OR2V2Q96R30 315 aa10.4□□□□□ -0.74
UBR4-205ENST00000417040 SPSB2Q99619 263 aa10.4□□□□□ -0.74
UBR4-205ENST00000417040 ZNF646O15015 1829 aaPredicted RBP10.4□□□□□ -0.74
UBR4-205ENST00000417040 DANCRP0C864 163 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms