RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 SLC2A2P11168 524 aaPredicted RBP13.91□□□□□ -0.18
LSM5-204ENST00000409909 RAB3BP20337 219 aa13.91□□□□□ -0.18
LSM5-204ENST00000409909 MYL9P24844 172 aa13.91□□□□□ -0.18
LSM5-204ENST00000409909 SOX6P35712 828 aa13.91□□□□□ -0.18
LSM5-204ENST00000409909 CEACAM6P40199 344 aa13.91□□□□□ -0.18
LSM5-204ENST00000409909 ACTBP60709 375 aa13.91□□□□□ -0.18
LSM5-204ENST00000409909 SLC35B1P78383 322 aa13.91□□□□□ -0.18
LSM5-204ENST00000409909 MMDQ15546 238 aa13.91□□□□□ -0.18
LSM5-204ENST00000409909 COMMD1Q8N668 190 aa13.91□□□□□ -0.18
LSM5-204ENST00000409909 ABHD14BQ96IU4 210 aa13.91□□□□□ -0.18
LSM5-204ENST00000409909 CMSS1Q9BQ75 279 aaKnown RBP13.91□□□□□ -0.18
LSM5-204ENST00000409909 YTHDF1Q9BYJ9 559 aaKnown RBP13.91□□□□□ -0.18
LSM5-204ENST00000409909 C11orf54Q9H0W9 315 aaPredicted RBP13.91□□□□□ -0.18
LSM5-204ENST00000409909 Q9H521 79 aa13.91□□□□□ -0.18
LSM5-204ENST00000409909 ITGB1BP1O14713 200 aa13.9□□□□□ -0.18
LSM5-204ENST00000409909 RAB29O14966 203 aa13.9□□□□□ -0.18
LSM5-204ENST00000409909 CT45A6P0DMU7 189 aa13.9□□□□□ -0.18
LSM5-204ENST00000409909 CT45A5P0DMU8 189 aa13.9□□□□□ -0.18
LSM5-204ENST00000409909 CT45A7P0DMV0 189 aa13.9□□□□□ -0.18
LSM5-204ENST00000409909 ZBTB25P24278 435 aa13.9□□□□□ -0.18
LSM5-204ENST00000409909 PSMB9P28065 219 aa13.9□□□□□ -0.18
LSM5-204ENST00000409909 RANBP1P43487 201 aa13.9□□□□□ -0.18
LSM5-204ENST00000409909 CFHR3Q02985 330 aa13.9□□□□□ -0.18
LSM5-204ENST00000409909 PNLIPRP3Q17RR3 467 aa13.9□□□□□ -0.18
LSM5-204ENST00000409909 FAM71F2Q6NXP2 309 aa13.9□□□□□ -0.18
LSM5-204ENST00000409909 LCNL1Q6ZST4 164 aa13.9□□□□□ -0.18
LSM5-204ENST00000409909 LINC00482Q8N8I6 264 aa13.9□□□□□ -0.18
LSM5-204ENST00000409909 ZFP57Q9NU63 452 aa13.9□□□□□ -0.18
LSM5-204ENST00000409909 PIPOXQ9P0Z9 390 aa13.9□□□□□ -0.18
LSM5-204ENST00000409909 MGAT4AQ9UM21 535 aa13.9□□□□□ -0.18
LSM5-204ENST00000409909 SMIM30A4D0T7 59 aa13.89□□□□□ -0.19
LSM5-204ENST00000409909 TRDCB7Z8K6 153 aa13.89□□□□□ -0.19
LSM5-204ENST00000409909 PROP1O75360 226 aa13.89□□□□□ -0.19
LSM5-204ENST00000409909 RPLP1P05386 114 aaKnown RBP13.89□□□□□ -0.19
LSM5-204ENST00000409909 FOXB2Q5VYV0 432 aa13.89□□□□□ -0.19
LSM5-204ENST00000409909 TEX38Q6PEX7 206 aa13.89□□□□□ -0.19
LSM5-204ENST00000409909 FAM131AQ6UXB0 335 aa13.89□□□□□ -0.19
LSM5-204ENST00000409909 C8orf86Q6ZUL3 223 aa13.89□□□□□ -0.19
LSM5-204ENST00000409909 MRPL41Q8IXM3 137 aaKnown RBP13.89□□□□□ -0.19
LSM5-204ENST00000409909 OR10R2Q8NGX6 335 aa13.89□□□□□ -0.19
LSM5-204ENST00000409909 RAB3CQ96E17 227 aa13.89□□□□□ -0.19
LSM5-204ENST00000409909 TXNL4BQ9NX01 149 aaKnown RBP13.89□□□□□ -0.19
LSM5-204ENST00000409909 ZNF107Q9UII5 783 aaPredicted RBP13.89□□□□□ -0.19
LSM5-204ENST00000409909 RAB27BO00194 218 aa13.88□□□□□ -0.19
LSM5-204ENST00000409909 HSPA12AO43301 675 aa13.88□□□□□ -0.19
LSM5-204ENST00000409909 IGF1P05019 195 aa13.88□□□□□ -0.19
LSM5-204ENST00000409909 GNB3P16520 340 aa13.88□□□□□ -0.19
LSM5-204ENST00000409909 RAB6AP20340 208 aa13.88□□□□□ -0.19
LSM5-204ENST00000409909 FGF9P31371 208 aaPredicted RBP13.88□□□□□ -0.19
LSM5-204ENST00000409909 THBS3P49746 956 aa13.88□□□□□ -0.19
LSM5-204ENST00000409909 GLDNQ6ZMI3 551 aaPredicted RBP13.88□□□□□ -0.19
LSM5-204ENST00000409909 RNF152Q8N8N0 203 aa13.88□□□□□ -0.19
LSM5-204ENST00000409909 KLHL30-AS1Q8NEE0 82 aa13.88□□□□□ -0.19
LSM5-204ENST00000409909 NPBQ8NG41 125 aa13.88□□□□□ -0.19
LSM5-204ENST00000409909 FCGR1BQ92637 280 aa13.88□□□□□ -0.19
LSM5-204ENST00000409909 PTX4Q96A99 478 aa13.88□□□□□ -0.19
LSM5-204ENST00000409909 GON7Q9BXV9 100 aa13.88□□□□□ -0.19
LSM5-204ENST00000409909 NECAP2Q9NVZ3 263 aa13.88□□□□□ -0.19
LSM5-204ENST00000409909 RNF150Q9ULK6 438 aa13.88□□□□□ -0.19
LSM5-204ENST00000409909 MFNGO00587 321 aa13.87□□□□□ -0.19
LSM5-204ENST00000409909 NBR2O15453 112 aa13.87□□□□□ -0.19
LSM5-204ENST00000409909 FCGR3AP08637 254 aa13.87□□□□□ -0.19
LSM5-204ENST00000409909 FOXE3Q13461 319 aa13.87□□□□□ -0.19
LSM5-204ENST00000409909 C5orf64Q2M2E5 130 aa13.87□□□□□ -0.19
LSM5-204ENST00000409909 ZNF773Q6PK81 442 aa13.87□□□□□ -0.19
LSM5-204ENST00000409909 ZNF695Q8IW36 515 aa13.87□□□□□ -0.19
LSM5-204ENST00000409909 EDARADDQ8WWZ3 215 aa13.87□□□□□ -0.19
LSM5-204ENST00000409909 GHITMQ9H3K2 345 aa13.87□□□□□ -0.19
LSM5-204ENST00000409909 ZNF580Q9UK33 172 aa13.87□□□□□ -0.19
LSM5-204ENST00000409909 STUB1Q9UNE7 303 aa13.87□□□□□ -0.19
LSM5-204ENST00000409909 A0A075B6Q4 140 aa13.86□□□□□ -0.19
LSM5-204ENST00000409909 IGHV7-81A0A0B4J1V7 117 aa13.86□□□□□ -0.19
LSM5-204ENST00000409909 NUDT19A8MXV4 375 aa13.86□□□□□ -0.19
LSM5-204ENST00000409909 H0YJW9 148 aa13.86□□□□□ -0.19
LSM5-204ENST00000409909 RRP9O43818 475 aaKnown RBP13.86□□□□□ -0.19
LSM5-204ENST00000409909 NDUFA3O95167 84 aa13.86□□□□□ -0.19
LSM5-204ENST00000409909 IGHG4P01861 327 aa13.86□□□□□ -0.19
LSM5-204ENST00000409909 HLA-DRB1P01911 266 aa13.86□□□□□ -0.19
LSM5-204ENST00000409909 CD3GP09693 182 aa13.86□□□□□ -0.19
LSM5-204ENST00000409909 HIST1H1DP16402 221 aaKnown RBP13.86□□□□□ -0.19
LSM5-204ENST00000409909 SLC6A1P30531 599 aa13.86□□□□□ -0.19
LSM5-204ENST00000409909 LINC00205P59089 165 aa13.86□□□□□ -0.19
LSM5-204ENST00000409909 REC114Q7Z4M0 266 aa13.86□□□□□ -0.19
LSM5-204ENST00000409909 DRAXINQ8NBI3 349 aaPredicted RBP13.86□□□□□ -0.19
LSM5-204ENST00000409909 OR5AN1Q8NGI8 311 aa13.86□□□□□ -0.19
LSM5-204ENST00000409909 OR4A4PQ8NGN8 299 aa13.86□□□□□ -0.19
LSM5-204ENST00000409909 MAFIPQ8WZ33 124 aa13.86□□□□□ -0.19
LSM5-204ENST00000409909 RCC1LQ96I51 464 aaKnown RBP13.86□□□□□ -0.19
LSM5-204ENST00000409909 RAX2Q96IS3 184 aa13.86□□□□□ -0.19
LSM5-204ENST00000409909 KCTD7Q96MP8 289 aa13.86□□□□□ -0.19
LSM5-204ENST00000409909 DUX3Q96PT4 197 aa13.86□□□□□ -0.19
LSM5-204ENST00000409909 P2RX4Q99571 388 aa13.86□□□□□ -0.19
LSM5-204ENST00000409909 AURKAIP1Q9NWT8 199 aaPredicted RBP13.86□□□□□ -0.19
LSM5-204ENST00000409909 RDH8Q9NYR8 311 aa13.86□□□□□ -0.19
LSM5-204ENST00000409909 ZNF230Q9UIE0 474 aaPredicted RBP13.86□□□□□ -0.19
LSM5-204ENST00000409909 ELF5Q9UKW6 265 aaPredicted RBP13.86□□□□□ -0.19
LSM5-204ENST00000409909 OR5H14A6NHG9 310 aa13.85□□□□□ -0.19
LSM5-204ENST00000409909 G3V318 75 aa13.85□□□□□ -0.19
LSM5-204ENST00000409909 FABP7O15540 132 aa13.85□□□□□ -0.19
LSM5-204ENST00000409909 ELANEP08246 267 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms