RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 PTPN13Q12923 2485 aa5.38□□□□□ -1.55
SMCO1-201ENST00000397537 ANKRD17O75179 2603 aaKnown RBP5.38□□□□□ -1.55
SMCO1-201ENST00000397537 LINC01619G3V211 115 aa5.38□□□□□ -1.55
SMCO1-201ENST00000397537 K7ENP7 123 aa5.38□□□□□ -1.55
SMCO1-201ENST00000397537 MT-ND4LP03901 98 aa5.38□□□□□ -1.55
SMCO1-201ENST00000397537 REG1AP05451 166 aa5.38□□□□□ -1.55
SMCO1-201ENST00000397537 HSD17B1P14061 328 aa5.38□□□□□ -1.55
SMCO1-201ENST00000397537 PFN2P35080 140 aa5.38□□□□□ -1.55
SMCO1-201ENST00000397537 RPL29P47914 159 aaKnown RBP5.38□□□□□ -1.55
SMCO1-201ENST00000397537 TBPL1P62380 186 aa5.38□□□□□ -1.55
SMCO1-201ENST00000397537 NEDD8Q15843 81 aa5.38□□□□□ -1.55
SMCO1-201ENST00000397537 OCIAD2Q56VL3 154 aa5.38□□□□□ -1.55
SMCO1-201ENST00000397537 GLYATQ6IB77 296 aa5.38□□□□□ -1.55
SMCO1-201ENST00000397537 EIF5AL1Q6IS14 154 aaKnown RBP5.38□□□□□ -1.55
SMCO1-201ENST00000397537 STRADAQ7RTN6 431 aa5.38□□□□□ -1.55
SMCO1-201ENST00000397537 SNX29P2Q8IUI4 249 aa5.38□□□□□ -1.55
SMCO1-201ENST00000397537 OR51S1Q8NGJ8 323 aa5.38□□□□□ -1.55
SMCO1-201ENST00000397537 NABP1Q96AH0 204 aa5.38□□□□□ -1.55
SMCO1-201ENST00000397537 PGLYRP4Q96LB8 373 aa5.38□□□□□ -1.55
SMCO1-201ENST00000397537 OR52E6Q96RD3 313 aa5.38□□□□□ -1.55
SMCO1-201ENST00000397537 RNF126Q9BV68 326 aa5.38□□□□□ -1.55
SMCO1-201ENST00000397537 SLC29A3Q9BZD2 475 aa5.38□□□□□ -1.55
SMCO1-201ENST00000397537 SLC25A39Q9BZJ4 359 aaPredicted RBP5.38□□□□□ -1.55
SMCO1-201ENST00000397537 CALYQ9NYX4 217 aa5.38□□□□□ -1.55
SMCO1-201ENST00000397537 POMPQ9Y244 141 aa5.38□□□□□ -1.55
SMCO1-201ENST00000397537 HECTD1Q9ULT8 2610 aa5.38□□□□□ -1.55
SMCO1-201ENST00000397537 SMG1Q96Q15 3661 aaKnown RBP5.37□□□□□ -1.55
SMCO1-201ENST00000397537 IGLV1-36A0A0B4J1U3 117 aa5.37□□□□□ -1.55
SMCO1-201ENST00000397537 A0A0G2JRQ6 117 aa5.37□□□□□ -1.55
SMCO1-201ENST00000397537 SMIM35A0A1B0GVV1 85 aa5.37□□□□□ -1.55
SMCO1-201ENST00000397537 ZSCAN5DPP0CG00 497 aa5.37□□□□□ -1.55
SMCO1-201ENST00000397537 GNB3P16520 340 aa5.37□□□□□ -1.55
SMCO1-201ENST00000397537 PSMB1P20618 241 aaKnown RBP5.37□□□□□ -1.55
SMCO1-201ENST00000397537 MYCNOSP40205 109 aa5.37□□□□□ -1.55
SMCO1-201ENST00000397537 OR3A4PP47883 348 aa5.37□□□□□ -1.55
SMCO1-201ENST00000397537 DAZAP2Q15038 168 aaPredicted RBP5.37□□□□□ -1.55
SMCO1-201ENST00000397537 FOXL2NBQ6ZUU3 175 aa5.37□□□□□ -1.55
SMCO1-201ENST00000397537 UBALD2Q8IYN6 164 aa5.37□□□□□ -1.55
SMCO1-201ENST00000397537 RXFP2Q8WXD0 754 aa5.37□□□□□ -1.55
SMCO1-201ENST00000397537 SRSF12Q8WXF0 261 aaKnown RBP5.37□□□□□ -1.55
SMCO1-201ENST00000397537 ROPN1LQ96C74 230 aa5.37□□□□□ -1.55
SMCO1-201ENST00000397537 LRRC58Q96CX6 371 aa5.37□□□□□ -1.55
SMCO1-201ENST00000397537 PYURFQ96I23 114 aa5.37□□□□□ -1.55
SMCO1-201ENST00000397537 RNF157Q96PX1 679 aa5.37□□□□□ -1.55
SMCO1-201ENST00000397537 SIX2Q9NPC8 291 aa5.37□□□□□ -1.55
SMCO1-201ENST00000397537 SMCO4Q9NRQ5 59 aa5.37□□□□□ -1.55
SMCO1-201ENST00000397537 ARMCX1Q9P291 453 aa5.37□□□□□ -1.55
SMCO1-201ENST00000397537 OPTCQ9UBM4 332 aa5.37□□□□□ -1.55
SMCO1-201ENST00000397537 CARHSP1Q9Y2V2 147 aaKnown RBP5.37□□□□□ -1.55
SMCO1-201ENST00000397537 MTCL1Q9Y4B5 1905 aaKnown RBP5.37□□□□□ -1.55
SMCO1-201ENST00000397537 FANCMQ8IYD8 2048 aa5.37□□□□□ -1.55
SMCO1-201ENST00000397537 EXOC1LA0A1B0GW35 172 aa5.37□□□□□ -1.55
SMCO1-201ENST00000397537 UBFD1O14562 309 aaKnown RBP5.37□□□□□ -1.55
SMCO1-201ENST00000397537 FGF17O60258 216 aa5.37□□□□□ -1.55
SMCO1-201ENST00000397537 NPIPB7O75200 414 aa5.37□□□□□ -1.55
SMCO1-201ENST00000397537 SERPINA7P05543 415 aa5.37□□□□□ -1.55
SMCO1-201ENST00000397537 SNRPCP09234 159 aaKnown RBP5.37□□□□□ -1.55
SMCO1-201ENST00000397537 CSF3P09919 207 aa5.37□□□□□ -1.55
SMCO1-201ENST00000397537 UCHL1P09936 223 aa5.37□□□□□ -1.55
SMCO1-201ENST00000397537 HIST1H1TP22492 207 aaPredicted RBP5.37□□□□□ -1.55
SMCO1-201ENST00000397537 LINC00310P59036 64 aa5.37□□□□□ -1.55
SMCO1-201ENST00000397537 FKBP3Q00688 224 aaKnown RBP5.37□□□□□ -1.55
SMCO1-201ENST00000397537 WDR59Q6PJI9 974 aa5.37□□□□□ -1.55
SMCO1-201ENST00000397537 TMPPEQ6ZT21 453 aa5.37□□□□□ -1.55
SMCO1-201ENST00000397537 PTAR1Q7Z6K3 402 aaPredicted RBP5.37□□□□□ -1.55
SMCO1-201ENST00000397537 CBR4Q8N4T8 237 aa5.37□□□□□ -1.55
SMCO1-201ENST00000397537 TMED6Q8WW62 240 aa5.37□□□□□ -1.55
SMCO1-201ENST00000397537 CHCHD10Q8WYQ3 142 aaPredicted RBP5.37□□□□□ -1.55
SMCO1-201ENST00000397537 C9orf85Q96MD7 179 aa5.37□□□□□ -1.55
SMCO1-201ENST00000397537 OR2M4Q96R27 311 aa5.37□□□□□ -1.55
SMCO1-201ENST00000397537 S100A13Q99584 98 aa5.37□□□□□ -1.55
SMCO1-201ENST00000397537 SLIRPQ9GZT3 109 aaKnown RBP5.37□□□□□ -1.55
SMCO1-201ENST00000397537 IDI2-AS1Q9NZ38 188 aa5.37□□□□□ -1.55
SMCO1-201ENST00000397537 PSG8Q9UQ74 426 aa5.37□□□□□ -1.55
SMCO1-201ENST00000397537 TET1Q8NFU7 2136 aa5.36□□□□□ -1.55
SMCO1-201ENST00000397537 CNOT1A5YKK6 2376 aaKnown RBP5.36□□□□□ -1.55
SMCO1-201ENST00000397537 TRAV39A0A0B4J263 110 aa5.36□□□□□ -1.55
SMCO1-201ENST00000397537 SLC17A3O00476 420 aa5.36□□□□□ -1.55
SMCO1-201ENST00000397537 SEMA4FO95754 770 aa5.36□□□□□ -1.55
SMCO1-201ENST00000397537 TOMM40O96008 361 aa5.36□□□□□ -1.55
SMCO1-201ENST00000397537 EDN1P05305 212 aa5.36□□□□□ -1.55
SMCO1-201ENST00000397537 EIF4EP06730 217 aaKnown RBP5.36□□□□□ -1.55
SMCO1-201ENST00000397537 CRYGDP07320 174 aa5.36□□□□□ -1.55
SMCO1-201ENST00000397537 NMBP08949 121 aa5.36□□□□□ -1.55
SMCO1-201ENST00000397537 GZMMP51124 257 aa5.36□□□□□ -1.55
SMCO1-201ENST00000397537 ERVFC1-1P60608 527 aa5.36□□□□□ -1.55
SMCO1-201ENST00000397537 HBA1P69905 142 aa5.36□□□□□ -1.55
SMCO1-201ENST00000397537 CDK6Q00534 326 aa5.36□□□□□ -1.55
SMCO1-201ENST00000397537 FAM78BQ5VT40 261 aa5.36□□□□□ -1.55
SMCO1-201ENST00000397537 OTPQ5XKR4 325 aa5.36□□□□□ -1.55
SMCO1-201ENST00000397537 C11orf42Q8N5U0 333 aa5.36□□□□□ -1.55
SMCO1-201ENST00000397537 CNRIP1Q96F85 164 aaPredicted RBP5.36□□□□□ -1.55
SMCO1-201ENST00000397537 REEP6Q96HR9 211 aa5.36□□□□□ -1.55
SMCO1-201ENST00000397537 ZNF300Q96RE9 604 aaPredicted RBP5.36□□□□□ -1.55
SMCO1-201ENST00000397537 FAAP24Q9BTP7 215 aa5.36□□□□□ -1.55
SMCO1-201ENST00000397537 SRXN1Q9BYN0 137 aa5.36□□□□□ -1.55
SMCO1-201ENST00000397537 IL25Q9H293 177 aa5.36□□□□□ -1.55
SMCO1-201ENST00000397537 PRO1933Q9H354 126 aa5.36□□□□□ -1.55
SMCO1-201ENST00000397537 LRTM1Q9HBL6 345 aa5.36□□□□□ -1.55
SMCO1-201ENST00000397537 TMEM100Q9NV29 134 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms