RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 EWSR1Q01844 656 aaKnown RBP eCLIP6.34□□□□□ -1.39
SCFD1-202ENST00000396629 DYRK1AQ13627 763 aa6.34□□□□□ -1.39
SCFD1-202ENST00000396629 CD300EQ496F6 205 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-202ENST00000396629 C5orf24Q7Z6I8 188 aa6.34□□□□□ -1.39
SCFD1-202ENST00000396629 SPATA24Q86W54 205 aa6.34□□□□□ -1.39
SCFD1-202ENST00000396629 WFDC3Q8IUB2 231 aa6.34□□□□□ -1.39
SCFD1-202ENST00000396629 ACBD7Q8N6N7 88 aa6.34□□□□□ -1.39
SCFD1-202ENST00000396629 TSEN15Q8WW01 171 aaKnown RBP6.34□□□□□ -1.39
SCFD1-202ENST00000396629 PDCD1LG2Q9BQ51 273 aa6.34□□□□□ -1.39
SCFD1-202ENST00000396629 GABARAPL1Q9H0R8 117 aa6.34□□□□□ -1.39
SCFD1-202ENST00000396629 ZNF355PQ9NSJ1 428 aa6.34□□□□□ -1.39
SCFD1-202ENST00000396629 PEMTQ9UBM1 199 aa6.34□□□□□ -1.39
SCFD1-202ENST00000396629 METTL1Q9UBP6 276 aaKnown RBP6.34□□□□□ -1.39
SCFD1-202ENST00000396629 EXOGQ9Y2C4 368 aaKnown RBP6.34□□□□□ -1.39
SCFD1-202ENST00000396629 G3V2T6 193 aa6.33□□□□□ -1.4
SCFD1-202ENST00000396629 H0YJW9 148 aa6.33□□□□□ -1.4
SCFD1-202ENST00000396629 T-ENOLP0DO92 83 aa6.33□□□□□ -1.4
SCFD1-202ENST00000396629 GTF2F2P13984 249 aa6.33□□□□□ -1.4
SCFD1-202ENST00000396629 ATF4P18848 351 aaPredicted RBP6.33□□□□□ -1.4
SCFD1-202ENST00000396629 CALB2P22676 271 aa6.33□□□□□ -1.4
SCFD1-202ENST00000396629 MC5RP33032 325 aa6.33□□□□□ -1.4
SCFD1-202ENST00000396629 TNFRSF9Q07011 255 aa6.33□□□□□ -1.4
SCFD1-202ENST00000396629 PSG5Q15238 335 aa6.33□□□□□ -1.4
SCFD1-202ENST00000396629 HSP90B2PQ58FF3 399 aa6.33□□□□□ -1.4
SCFD1-202ENST00000396629 SYS1Q8N2H4 156 aa6.33□□□□□ -1.4
SCFD1-202ENST00000396629 OR5T1Q8NG75 326 aa6.33□□□□□ -1.4
SCFD1-202ENST00000396629 GHSRQ92847 366 aa6.33□□□□□ -1.4
SCFD1-202ENST00000396629 MRPL48Q96GC5 212 aaKnown RBP6.33□□□□□ -1.4
SCFD1-202ENST00000396629 S100A13Q99584 98 aa6.33□□□□□ -1.4
SCFD1-202ENST00000396629 THTPAQ9BU02 230 aa6.33□□□□□ -1.4
SCFD1-202ENST00000396629 IFI27L2Q9H2X8 130 aa6.33□□□□□ -1.4
SCFD1-202ENST00000396629 ZC4H2Q9NQZ6 224 aa6.33□□□□□ -1.4
SCFD1-202ENST00000396629 A0A0J9YWU9 116 aa6.33□□□□□ -1.4
SCFD1-202ENST00000396629 E9PI62 339 aa6.33□□□□□ -1.4
SCFD1-202ENST00000396629 SLC22A1O15245 554 aa6.33□□□□□ -1.4
SCFD1-202ENST00000396629 GLAP06280 429 aa6.33□□□□□ -1.4
SCFD1-202ENST00000396629 GSTP1P09211 210 aaKnown RBP6.33□□□□□ -1.4
SCFD1-202ENST00000396629 ZNF93P35789 620 aaPredicted RBP6.33□□□□□ -1.4
SCFD1-202ENST00000396629 MRPL28Q13084 256 aaKnown RBP6.33□□□□□ -1.4
SCFD1-202ENST00000396629 FXYD3Q14802 87 aa6.33□□□□□ -1.4
SCFD1-202ENST00000396629 RPEL1Q2QD12 228 aa6.33□□□□□ -1.4
SCFD1-202ENST00000396629 DEFB114Q30KQ6 69 aa6.33□□□□□ -1.4
SCFD1-202ENST00000396629 SLC22A6Q4U2R8 563 aa6.33□□□□□ -1.4
SCFD1-202ENST00000396629 SLC25A30Q5SVS4 291 aa6.33□□□□□ -1.4
SCFD1-202ENST00000396629 DDI2Q5TDH0 399 aa6.33□□□□□ -1.4
SCFD1-202ENST00000396629 DMKNQ6E0U4 476 aaPredicted RBP6.33□□□□□ -1.4
SCFD1-202ENST00000396629 RAB12Q6IQ22 244 aa6.33□□□□□ -1.4
SCFD1-202ENST00000396629 GLDNQ6ZMI3 551 aaPredicted RBP6.33□□□□□ -1.4
SCFD1-202ENST00000396629 BVESQ8NE79 360 aa6.33□□□□□ -1.4
SCFD1-202ENST00000396629 OR5AN1Q8NGI8 311 aa6.33□□□□□ -1.4
SCFD1-202ENST00000396629 USMG5Q96IX5 58 aa6.33□□□□□ -1.4
SCFD1-202ENST00000396629 CIB1Q99828 191 aa6.33□□□□□ -1.4
SCFD1-202ENST00000396629 GABARAPL3Q9BY60 117 aa6.33□□□□□ -1.4
SCFD1-202ENST00000396629 TINAGL1Q9GZM7 467 aaPredicted RBP6.33□□□□□ -1.4
SCFD1-202ENST00000396629 ISG20L2Q9H9L3 353 aaKnown RBP6.33□□□□□ -1.4
SCFD1-202ENST00000396629 TMEM138Q9NPI0 162 aa6.33□□□□□ -1.4
SCFD1-202ENST00000396629 MED4Q9NPJ6 270 aa6.33□□□□□ -1.4
SCFD1-202ENST00000396629 KCNIP1Q9NZI2 227 aa6.33□□□□□ -1.4
SCFD1-202ENST00000396629 PIPOXQ9P0Z9 390 aa6.33□□□□□ -1.4
SCFD1-202ENST00000396629 WASHC3Q9Y3C0 194 aa6.33□□□□□ -1.4
SCFD1-202ENST00000396629 NDUFB8O95169 186 aa6.32□□□□□ -1.4
SCFD1-202ENST00000396629 SPDEFO95238 335 aa6.32□□□□□ -1.4
SCFD1-202ENST00000396629 MAS1P04201 325 aa6.32□□□□□ -1.4
SCFD1-202ENST00000396629 SOX2P48431 317 aa6.32□□□□□ -1.4
SCFD1-202ENST00000396629 SSBP2P81877 361 aaPredicted RBP6.32□□□□□ -1.4
SCFD1-202ENST00000396629 FLOT2Q14254 428 aa6.32□□□□□ -1.4
SCFD1-202ENST00000396629 GPR176Q14439 515 aa6.32□□□□□ -1.4
SCFD1-202ENST00000396629 RPL39P5Q59GN2 51 aa6.32□□□□□ -1.4
SCFD1-202ENST00000396629 OR2AK2Q8NG84 335 aa6.32□□□□□ -1.4
SCFD1-202ENST00000396629 MRPL30Q8TCC3 161 aaKnown RBP6.32□□□□□ -1.4
SCFD1-202ENST00000396629 TRUB1Q8WWH5 349 aaKnown RBP6.32□□□□□ -1.4
SCFD1-202ENST00000396629 SNAPC3Q92966 411 aa6.32□□□□□ -1.4
SCFD1-202ENST00000396629 TMEM68Q96MH6 324 aa6.32□□□□□ -1.4
SCFD1-202ENST00000396629 MYCBPQ99417 103 aaPredicted RBP6.32□□□□□ -1.4
SCFD1-202ENST00000396629 ALG8Q9BVK2 526 aa6.32□□□□□ -1.4
SCFD1-202ENST00000396629 GGTLC1Q9BX51 225 aa6.32□□□□□ -1.4
SCFD1-202ENST00000396629 LRRC42Q9Y546 428 aa6.32□□□□□ -1.4
SCFD1-202ENST00000396629 PEX16Q9Y5Y5 336 aa6.32□□□□□ -1.4
SCFD1-202ENST00000396629 FAM90A7PA6NKC0 464 aa6.32□□□□□ -1.4
SCFD1-202ENST00000396629 FAM90A23PA8MXZ1 464 aa6.32□□□□□ -1.4
SCFD1-202ENST00000396629 H7C2Y5 167 aa6.32□□□□□ -1.4
SCFD1-202ENST00000396629 RAB29O14966 203 aa6.32□□□□□ -1.4
SCFD1-202ENST00000396629 GPX5O75715 221 aa6.32□□□□□ -1.4
SCFD1-202ENST00000396629 BDKRB2P30411 391 aa6.32□□□□□ -1.4
SCFD1-202ENST00000396629 ATP6AP1Q15904 470 aa6.32□□□□□ -1.4
SCFD1-202ENST00000396629 LYG2Q86SG7 212 aa6.32□□□□□ -1.4
SCFD1-202ENST00000396629 LHFPL3Q86UP9 236 aa6.32□□□□□ -1.4
SCFD1-202ENST00000396629 GRPEL2Q8TAA5 225 aa6.32□□□□□ -1.4
SCFD1-202ENST00000396629 GALMQ96C23 342 aa6.32□□□□□ -1.4
SCFD1-202ENST00000396629 CYYR1Q96J86 154 aa6.32□□□□□ -1.4
SCFD1-202ENST00000396629 TSNAXQ99598 290 aaKnown RBP6.32□□□□□ -1.4
SCFD1-202ENST00000396629 PARP12Q9H0J9 701 aaKnown RBP6.32□□□□□ -1.4
SCFD1-202ENST00000396629 TP53TG1Q9Y2A0 90 aa6.32□□□□□ -1.4
SCFD1-202ENST00000396629 MUC4Q99102 2169 aa6.31□□□□□ -1.4
SCFD1-202ENST00000396629 LOC102724200A0A096LPH7 203 aaPredicted RBP6.31□□□□□ -1.4
SCFD1-202ENST00000396629 J3QL48 77 aa6.31□□□□□ -1.4
SCFD1-202ENST00000396629 BMPR1BO00238 502 aa6.31□□□□□ -1.4
SCFD1-202ENST00000396629 ST8SIA5O15466 376 aa6.31□□□□□ -1.4
SCFD1-202ENST00000396629 CD2P06729 351 aa6.31□□□□□ -1.4
SCFD1-202ENST00000396629 FUT3P21217 361 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms