RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 ELOVL5Q9NYP7 299 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 MRM2Q9UI43 246 aaKnown RBP7.31□□□□□ -1.24
NDE1-202ENST00000396355 LSM4Q9Y4Z0 139 aaKnown RBP7.31□□□□□ -1.24
NDE1-202ENST00000396355 LRP12Q9Y561 859 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 SOX21Q9Y651 276 aaPredicted RBP7.31□□□□□ -1.24
NDE1-202ENST00000396355 ICE1Q9Y2F5 2266 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 A0A1W2PP11 408 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 J3QRE1 110 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 DEDDO75618 318 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 OR7C1O76099 320 aaPredicted RBP7.31□□□□□ -1.24
NDE1-202ENST00000396355 TYMSP04818 313 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 PNMTP11086 282 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 SRIP30626 198 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 ADMP35318 185 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 HBG1P69891 147 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 HBG2P69892 147 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 ICAM4Q14773 271 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 PLPPR5Q32ZL2 321 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 SFTA2Q6UW10 78 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 MCRIP2Q9BUT9 160 aaKnown RBP7.31□□□□□ -1.24
NDE1-202ENST00000396355 QTRT1Q9BXR0 403 aaKnown RBP7.31□□□□□ -1.24
NDE1-202ENST00000396355 RTN4RQ9BZR6 473 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 ST3GAL6Q9Y274 331 aa7.31□□□□□ -1.24
NDE1-202ENST00000396355 A0A087X0K7 114 aa7.3□□□□□ -1.24
NDE1-202ENST00000396355 A0A0U1RQV5 110 aa7.3□□□□□ -1.24
NDE1-202ENST00000396355 A6NDN8 102 aa7.3□□□□□ -1.24
NDE1-202ENST00000396355 H3BVH4 76 aa7.3□□□□□ -1.24
NDE1-202ENST00000396355 ADAM20O43506 726 aa7.3□□□□□ -1.24
NDE1-202ENST00000396355 CHST1O43916 411 aa7.3□□□□□ -1.24
NDE1-202ENST00000396355 FCGR2AP12318 317 aa7.3□□□□□ -1.24
NDE1-202ENST00000396355 SSBP1Q04837 148 aaKnown RBP7.3□□□□□ -1.24
NDE1-202ENST00000396355 PDLIM3Q53GG5 364 aaPredicted RBP7.3□□□□□ -1.24
NDE1-202ENST00000396355 RAET1LQ5VY80 246 aa7.3□□□□□ -1.24
NDE1-202ENST00000396355 OR2K2Q8NGT1 345 aa7.3□□□□□ -1.24
NDE1-202ENST00000396355 PATE1Q8WXA2 126 aa7.3□□□□□ -1.24
NDE1-202ENST00000396355 MMABQ96EY8 250 aaPredicted RBP7.3□□□□□ -1.24
NDE1-202ENST00000396355 POM121L2Q96KW2 1035 aa7.3□□□□□ -1.24
NDE1-202ENST00000396355 FGF22Q9HCT0 170 aa7.3□□□□□ -1.24
NDE1-202ENST00000396355 ARHGAP21Q5T5U3 1957 aa7.3□□□□□ -1.24
NDE1-202ENST00000396355 EML5Q05BV3 1969 aa7.3□□□□□ -1.24
NDE1-202ENST00000396355 SLC22A20A6NK97 555 aa7.3□□□□□ -1.24
NDE1-202ENST00000396355 NDUFB4O95168 129 aa7.3□□□□□ -1.24
NDE1-202ENST00000396355 GCSHP23434 173 aa7.3□□□□□ -1.24
NDE1-202ENST00000396355 SRPXP78539 464 aa7.3□□□□□ -1.24
NDE1-202ENST00000396355 ZNF260Q3ZCT1 412 aa7.3□□□□□ -1.24
NDE1-202ENST00000396355 OR2L13Q8N349 312 aa7.3□□□□□ -1.24
NDE1-202ENST00000396355 OR52M1Q8NGK5 317 aa7.3□□□□□ -1.24
NDE1-202ENST00000396355 PRSS27Q9BQR3 290 aa7.3□□□□□ -1.24
NDE1-202ENST00000396355 FBXO34Q9NWN3 711 aa7.3□□□□□ -1.24
NDE1-202ENST00000396355 FRYLO94915 3013 aa7.3□□□□□ -1.24
NDE1-202ENST00000396355 FIGNL2A6NMB9 653 aa7.3□□□□□ -1.24
NDE1-202ENST00000396355 C11orf94C9JXX5 98 aa7.3□□□□□ -1.24
NDE1-202ENST00000396355 SLC17A3O00476 420 aa7.3□□□□□ -1.24
NDE1-202ENST00000396355 HCRTR1O43613 425 aa7.3□□□□□ -1.24
NDE1-202ENST00000396355 IL18BPO95998 194 aa7.3□□□□□ -1.24
NDE1-202ENST00000396355 APOBEC1P41238 236 aaKnown RBP7.3□□□□□ -1.24
NDE1-202ENST00000396355 MYBPHQ13203 477 aa7.3□□□□□ -1.24
NDE1-202ENST00000396355 FCRL6Q6DN72 434 aa7.3□□□□□ -1.24
NDE1-202ENST00000396355 OR8B2Q96RD0 313 aa7.3□□□□□ -1.24
NDE1-202ENST00000396355 GABRG3Q99928 467 aa7.3□□□□□ -1.24
NDE1-202ENST00000396355 ENY2Q9NPA8 101 aa7.3□□□□□ -1.24
NDE1-202ENST00000396355 HSPB8Q9UJY1 196 aa7.3□□□□□ -1.24
NDE1-202ENST00000396355 SLC17A4Q9Y2C5 497 aa7.3□□□□□ -1.24
NDE1-202ENST00000396355 MSRB2Q9Y3D2 182 aa7.3□□□□□ -1.24
NDE1-202ENST00000396355 OR5B21A6NL26 309 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 TRAPPC2LH3BP13 241 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 LIPFP07098 398 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 RPS4Y1P22090 263 aaKnown RBP7.29□□□□□ -1.24
NDE1-202ENST00000396355 IL3RAP26951 378 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 CA7P43166 264 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 INSM1Q01101 510 aaPredicted RBP7.29□□□□□ -1.24
NDE1-202ENST00000396355 RBPJQ06330 500 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 TRMT12Q53H54 448 aaKnown RBP7.29□□□□□ -1.24
NDE1-202ENST00000396355 DNLZQ5SXM8 178 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 C5orf17Q8NAS9 161 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 TMEM116Q8NCL8 245 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 CCL4L1Q8NHW4 92 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 RNASEH2CQ8TDP1 164 aaKnown RBP7.29□□□□□ -1.24
NDE1-202ENST00000396355 HOXB13Q92826 284 aaPredicted RBP7.29□□□□□ -1.24
NDE1-202ENST00000396355 KISS1RQ969F8 398 aaPredicted RBP7.29□□□□□ -1.24
NDE1-202ENST00000396355 NEIL1Q96FI4 390 aaPredicted RBP7.29□□□□□ -1.24
NDE1-202ENST00000396355 NUDT22Q9BRQ3 303 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 GPR35Q9HC97 309 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 SDF2L1Q9HCN8 221 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 HEYLQ9NQ87 328 aaPredicted RBP7.29□□□□□ -1.24
NDE1-202ENST00000396355 TBC1D29Q9UFV1 150 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 NKX2-6A6NCS4 301 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 HIST1H1DP16402 221 aaKnown RBP7.29□□□□□ -1.24
NDE1-202ENST00000396355 MGAT2Q10469 447 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 AKAP6Q13023 2319 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 SRSF7Q16629 238 aaKnown RBP eCLIP7.29□□□□□ -1.24
NDE1-202ENST00000396355 ACSF3Q4G176 576 aaPredicted RBP7.29□□□□□ -1.24
NDE1-202ENST00000396355 MFSD12Q6NUT3 480 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 PNKDQ8N490 385 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 OR51E1Q8TCB6 317 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 ANAPC16Q96DE5 110 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 APOOQ9BUR5 198 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 RPRMQ9NS64 109 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 KLHDC2Q9Y2U9 406 aa7.29□□□□□ -1.24
NDE1-202ENST00000396355 OR51B2Q9Y5P1 312 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms