RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 OR5L1Q8NGL2 311 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 OR1L6Q8NGR2 347 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 C22orf15Q8WYQ4 148 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 ACY3Q96HD9 319 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 REEP6Q96HR9 211 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 NICN1Q9BSH3 213 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 CHODLQ9H9P2 273 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 MRPS28Q9Y2Q9 187 aaKnown RBP4.55□□□□□ -1.68
VPS41-203ENST00000395969 LSM5Q9Y4Y9 91 aaKnown RBP4.55□□□□□ -1.68
VPS41-203ENST00000395969 FREM3P0C091 2139 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 SLC22A20A6NK97 555 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 K7ENP7 123 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 SLC33A1O00400 549 aaPredicted RBP4.55□□□□□ -1.68
VPS41-203ENST00000395969 CRTAPO75718 401 aaPredicted RBP4.55□□□□□ -1.68
VPS41-203ENST00000395969 RAD51DO75771 328 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 OPN1MWP04001 364 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 CD55P08174 381 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 OPN1MW2P0DN77 364 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 OPN1MW3P0DN78 364 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 SLC25A6P12236 298 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 WT1P19544 449 aaPredicted RBP4.55□□□□□ -1.68
VPS41-203ENST00000395969 ANOS1P23352 680 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 CDAP32320 146 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 KIR2DL2P43627 348 aaPredicted RBP4.55□□□□□ -1.68
VPS41-203ENST00000395969 RBX1P62877 108 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 COL10A1Q03692 680 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 ZNF92Q03936 586 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 IQCJQ1A5X6 159 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 MRPL41Q8IXM3 137 aaKnown RBP4.55□□□□□ -1.68
VPS41-203ENST00000395969 FAM185AQ8N0U4 392 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 C11orf42Q8N5U0 333 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 ZNF283Q8N7M2 679 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 FDCSPQ8NFU4 85 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 OR10A7Q8NGE5 316 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 OR5H2Q8NGV7 314 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 CLDND2Q8NHS1 167 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 ZNF71Q9NQZ8 489 aaPredicted RBP4.55□□□□□ -1.68
VPS41-203ENST00000395969 SLC35D1Q9NTN3 355 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 LIPGQ9Y5X9 500 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 WSB1Q9Y6I7 421 aa4.55□□□□□ -1.68
VPS41-203ENST00000395969 IGKV1-27A0A075B6S5 117 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 CRYM-AS1A6NIL9 109 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 M0QZ24 198 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 MSTNO14793 375 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 UCP1P25874 307 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 RBMXP38159 391 aaKnown RBP4.54□□□□□ -1.68
VPS41-203ENST00000395969 WNT5AP41221 380 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 PTTG1IPP53801 180 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 ZNF146Q15072 292 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 SPIN3Q5JUX0 258 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 FAM90A2PQ658T7 463 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 SEM1Q6ZVN7 128 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 RBMXL3Q8N7X1 1067 aaKnown RBP4.54□□□□□ -1.68
VPS41-203ENST00000395969 NECAP1Q8NC96 275 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 ST6GALNAC3Q8NDV1 305 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 ABHD3Q8WU67 409 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 IL22RA2Q969J5 263 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 MRPL24Q96A35 216 aaKnown RBP4.54□□□□□ -1.68
VPS41-203ENST00000395969 ZNF837Q96EG3 531 aaPredicted RBP4.54□□□□□ -1.68
VPS41-203ENST00000395969 PGAM5Q96HS1 289 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 PECRQ9BY49 303 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 OR51I2Q9H344 312 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 C11orf1Q9H5F2 150 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 LPAR2Q9HBW0 351 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 MSL2Q9HCI7 577 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 UBE2J1Q9Y385 318 aaPredicted RBP4.54□□□□□ -1.68
VPS41-203ENST00000395969 IGLV3-9A0A075B6K5 115 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 LRP5LA4QPB2 252 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 PPP5D1E7EU14 171 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 IL6RP08887 468 aaPredicted RBP4.54□□□□□ -1.68
VPS41-203ENST00000395969 IRF2P14316 349 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 CCKARP32238 428 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 BRS3P32247 399 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 ARL3P36405 182 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 NOVA1P51513 510 aaKnown RBP4.54□□□□□ -1.68
VPS41-203ENST00000395969 RBM11P57052 281 aaKnown RBP4.54□□□□□ -1.68
VPS41-203ENST00000395969 PMP22Q01453 160 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 FOXC1Q12948 553 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 PRDX4Q13162 271 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 MOB1BQ7L9L4 216 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 ZADH2Q8N4Q0 377 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 FGFBP3Q8TAT2 258 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 FAM57AQ8TBR7 257 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 Q8TCH9 128 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 FAM222BQ8WU58 562 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 RBMXL1Q96E39 390 aaKnown RBP4.54□□□□□ -1.68
VPS41-203ENST00000395969 HIST1H2AAQ96QV6 131 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 TXN2Q99757 166 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 CTDSP1Q9GZU7 261 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 WIPI2Q9Y4P8 454 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 NCOA6Q14686 2063 aaPredicted RBP4.54□□□□□ -1.68
VPS41-203ENST00000395969 ESPL1Q14674 2120 aa4.54□□□□□ -1.68
VPS41-203ENST00000395969 SOCS1O15524 211 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 IFNA21P01568 189 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 CTSDP07339 412 aaPredicted RBP4.53□□□□□ -1.68
VPS41-203ENST00000395969 GLI4P10075 376 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 MMP9P14780 707 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 IGHV1-2P23083 117 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 MZT1Q08AG7 82 aa4.53□□□□□ -1.68
VPS41-203ENST00000395969 TAF9Q16594 264 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms