RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 ZBTB34Q8NCN2 500 aa12.53□□□□□ -0.4
SCAF11-204ENST00000395454 SPIN2AQ99865 258 aa12.53□□□□□ -0.4
SCAF11-204ENST00000395454 SPIN2BQ9BPZ2 258 aa12.53□□□□□ -0.4
SCAF11-204ENST00000395454 PARP12Q9H0J9 701 aaKnown RBP12.53□□□□□ -0.4
SCAF11-204ENST00000395454 DNTTIP1Q9H147 329 aa12.53□□□□□ -0.4
SCAF11-204ENST00000395454 CYTL1Q9NRR1 136 aa12.53□□□□□ -0.4
SCAF11-204ENST00000395454 TANC2Q9HCD6 1990 aa12.53□□□□□ -0.4
SCAF11-204ENST00000395454 PDZD2O15018 2839 aa12.53□□□□□ -0.4
SCAF11-204ENST00000395454 ANKRD34BA5PLL1 514 aa12.52□□□□□ -0.4
SCAF11-204ENST00000395454 LYNX1G3V0Z9 82 aa12.52□□□□□ -0.4
SCAF11-204ENST00000395454 K7EPK0 472 aa12.52□□□□□ -0.4
SCAF11-204ENST00000395454 HSPA12AO43301 675 aa12.52□□□□□ -0.4
SCAF11-204ENST00000395454 SPDEFO95238 335 aa12.52□□□□□ -0.4
SCAF11-204ENST00000395454 IGHV4-39P01824 125 aa12.52□□□□□ -0.4
SCAF11-204ENST00000395454 TFF1P04155 84 aa12.52□□□□□ -0.4
SCAF11-204ENST00000395454 LYNX1P0DP58 116 aa12.52□□□□□ -0.4
SCAF11-204ENST00000395454 HKR1P10072 659 aa12.52□□□□□ -0.4
SCAF11-204ENST00000395454 SLC25A6P12236 298 aa12.52□□□□□ -0.4
SCAF11-204ENST00000395454 CEACAM6P40199 344 aa12.52□□□□□ -0.4
SCAF11-204ENST00000395454 EIF4EBP1Q13541 118 aaPredicted RBP12.52□□□□□ -0.4
SCAF11-204ENST00000395454 ALKAL2Q6UX46 152 aa12.52□□□□□ -0.4
SCAF11-204ENST00000395454 FAM71E2Q8N5Q1 922 aa12.52□□□□□ -0.4
SCAF11-204ENST00000395454 OR13A1Q8NGR1 328 aa12.52□□□□□ -0.4
SCAF11-204ENST00000395454 C11orf1Q9H5F2 150 aa12.52□□□□□ -0.4
SCAF11-204ENST00000395454 ODAMA1E959 279 aa12.52□□□□□ -0.41
SCAF11-204ENST00000395454 LEUTXA8MZ59 168 aa12.52□□□□□ -0.41
SCAF11-204ENST00000395454 RRASP10301 218 aa12.52□□□□□ -0.41
SCAF11-204ENST00000395454 NUP62P37198 522 aaPredicted RBP12.52□□□□□ -0.41
SCAF11-204ENST00000395454 S100A10P60903 97 aa12.52□□□□□ -0.41
SCAF11-204ENST00000395454 HFEQ30201 348 aa12.52□□□□□ -0.41
SCAF11-204ENST00000395454 ZNF695Q8IW36 515 aa12.52□□□□□ -0.41
SCAF11-204ENST00000395454 ZNF561Q8N587 486 aa12.52□□□□□ -0.41
SCAF11-204ENST00000395454 OR52M1Q8NGK5 317 aa12.52□□□□□ -0.41
SCAF11-204ENST00000395454 PLEKHA2Q9HB19 425 aa12.52□□□□□ -0.41
SCAF11-204ENST00000395454 E5RGE8 158 aa12.51□□□□□ -0.41
SCAF11-204ENST00000395454 TAAR5O14804 337 aa12.51□□□□□ -0.41
SCAF11-204ENST00000395454 MUC1P15941 1255 aaPredicted RBP12.51□□□□□ -0.41
SCAF11-204ENST00000395454 GZMHP20718 246 aa12.51□□□□□ -0.41
SCAF11-204ENST00000395454 COL8A2P25067 703 aa12.51□□□□□ -0.41
SCAF11-204ENST00000395454 IL2RGP31785 369 aa12.51□□□□□ -0.41
SCAF11-204ENST00000395454 P2RX3P56373 397 aa12.51□□□□□ -0.41
SCAF11-204ENST00000395454 SMCO1Q147U7 214 aa12.51□□□□□ -0.41
SCAF11-204ENST00000395454 DEFB113Q30KQ7 82 aa12.51□□□□□ -0.41
SCAF11-204ENST00000395454 PRR18Q8N4B5 295 aa12.51□□□□□ -0.41
SCAF11-204ENST00000395454 DRAM1Q8N682 238 aa12.51□□□□□ -0.41
SCAF11-204ENST00000395454 ZNF645Q8N7E2 425 aa12.51□□□□□ -0.41
SCAF11-204ENST00000395454 MRGPRDQ8TDS7 321 aa12.51□□□□□ -0.41
SCAF11-204ENST00000395454 ZNF471Q9BX82 626 aaPredicted RBP12.51□□□□□ -0.41
SCAF11-204ENST00000395454 FAM234AQ9H0X4 552 aa12.51□□□□□ -0.41
SCAF11-204ENST00000395454 SLC25A32Q9H2D1 315 aa12.51□□□□□ -0.41
SCAF11-204ENST00000395454 LIN7CQ9NUP9 197 aaKnown RBP12.51□□□□□ -0.41
SCAF11-204ENST00000395454 NSG2Q9Y328 171 aa12.51□□□□□ -0.41
SCAF11-204ENST00000395454 POMT1Q9Y6A1 747 aa12.51□□□□□ -0.41
SCAF11-204ENST00000395454 CCDC168Q8NDH2 2452 aa12.51□□□□□ -0.41
SCAF11-204ENST00000395454 ST8SIA3O43173 380 aa12.5□□□□□ -0.41
SCAF11-204ENST00000395454 KCNAB3O43448 404 aa12.5□□□□□ -0.41
SCAF11-204ENST00000395454 CGB3P0DN86 165 aa12.5□□□□□ -0.41
SCAF11-204ENST00000395454 CGB7P0DN87 165 aa12.5□□□□□ -0.41
SCAF11-204ENST00000395454 IRF2P14316 349 aa12.5□□□□□ -0.41
SCAF11-204ENST00000395454 NINJ1Q92982 152 aa12.5□□□□□ -0.41
SCAF11-204ENST00000395454 GPHA2Q96T91 129 aa12.5□□□□□ -0.41
SCAF11-204ENST00000395454 FAM212BQ9NTI7 297 aaPredicted RBP12.5□□□□□ -0.41
SCAF11-204ENST00000395454 TMEM106BQ9NUM4 274 aa12.5□□□□□ -0.41
SCAF11-204ENST00000395454 DCAF16Q9NXF7 216 aa12.5□□□□□ -0.41
SCAF11-204ENST00000395454 AKAP9Q99996 3911 aa12.5□□□□□ -0.41
SCAF11-204ENST00000395454 IGHV3OR15-7A0A075B7D8 119 aa12.5□□□□□ -0.41
SCAF11-204ENST00000395454 LRRC30A6NM36 301 aa12.5□□□□□ -0.41
SCAF11-204ENST00000395454 F5H0A9 414 aaPredicted RBP12.5□□□□□ -0.41
SCAF11-204ENST00000395454 F2RL2O00254 374 aa12.5□□□□□ -0.41
SCAF11-204ENST00000395454 CYB5R3P00387 301 aaPredicted RBP12.5□□□□□ -0.41
SCAF11-204ENST00000395454 OR8U9P0C7N5 309 aa12.5□□□□□ -0.41
SCAF11-204ENST00000395454 SSTR5P35346 364 aa12.5□□□□□ -0.41
SCAF11-204ENST00000395454 ZNF525Q8N782 197 aa12.5□□□□□ -0.41
SCAF11-204ENST00000395454 OR8U1Q8NH10 309 aa12.5□□□□□ -0.41
SCAF11-204ENST00000395454 UBALD1Q8TB05 177 aa12.5□□□□□ -0.41
SCAF11-204ENST00000395454 LSM10Q969L4 123 aaKnown RBP12.5□□□□□ -0.41
SCAF11-204ENST00000395454 BEX4Q9NWD9 120 aaPredicted RBP12.5□□□□□ -0.41
SCAF11-204ENST00000395454 RCL1Q9Y2P8 373 aaKnown RBP12.5□□□□□ -0.41
SCAF11-204ENST00000395454 SETXQ7Z333 2677 aaKnown RBP12.5□□□□□ -0.41
SCAF11-204ENST00000395454 RNF212BA8MTL3 300 aa12.49□□□□□ -0.41
SCAF11-204ENST00000395454 SPINT2O43291 252 aa12.49□□□□□ -0.41
SCAF11-204ENST00000395454 TNFSF12O43508 249 aa12.49□□□□□ -0.41
SCAF11-204ENST00000395454 PITX3O75364 302 aa12.49□□□□□ -0.41
SCAF11-204ENST00000395454 GAPDHP04406 335 aaKnown RBP12.49□□□□□ -0.41
SCAF11-204ENST00000395454 PAX1P15863 534 aa12.49□□□□□ -0.41
SCAF11-204ENST00000395454 RPL12P30050 165 aaKnown RBP12.49□□□□□ -0.41
SCAF11-204ENST00000395454 CD80P33681 288 aa12.49□□□□□ -0.41
SCAF11-204ENST00000395454 P2RY1P47900 373 aa12.49□□□□□ -0.41
SCAF11-204ENST00000395454 GNMTQ14749 295 aa12.49□□□□□ -0.41
SCAF11-204ENST00000395454 GPR157Q5UAW9 335 aa12.49□□□□□ -0.41
SCAF11-204ENST00000395454 ZNF788Q6ZQV5 615 aa12.49□□□□□ -0.41
SCAF11-204ENST00000395454 FAM219AQ8IW50 185 aa12.49□□□□□ -0.41
SCAF11-204ENST00000395454 BOLLQ8N9W6 283 aaKnown RBP12.49□□□□□ -0.41
SCAF11-204ENST00000395454 DMBX1Q8NFW5 382 aa12.49□□□□□ -0.41
SCAF11-204ENST00000395454 AGMATQ9BSE5 352 aa12.49□□□□□ -0.41
SCAF11-204ENST00000395454 BARX1Q9HBU1 254 aaPredicted RBP12.49□□□□□ -0.41
SCAF11-204ENST00000395454 JPT1Q9UK76 154 aa12.49□□□□□ -0.41
SCAF11-204ENST00000395454 TPT1P13693 172 aaKnown RBP12.49□□□□□ -0.41
SCAF11-204ENST00000395454 MRPS11P82912 194 aaKnown RBP12.49□□□□□ -0.41
SCAF11-204ENST00000395454 C1orf87Q8N0U7 546 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms