RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 SPTBP11277 2137 aa17.08■□□□□ 0.32
SHANK1-203ENST00000391813 IGKV1-8A0A0C4DH67 115 aa17.08■□□□□ 0.32
SHANK1-203ENST00000391813 OR2T8A6NH00 312 aa17.08■□□□□ 0.32
SHANK1-203ENST00000391813 FOLR2P14207 255 aa17.08■□□□□ 0.32
SHANK1-203ENST00000391813 PLP1P60201 277 aa17.08■□□□□ 0.32
SHANK1-203ENST00000391813 TM4SF19Q96DZ7 209 aa17.08■□□□□ 0.32
SHANK1-203ENST00000391813 SEBOXQ9HB31 216 aaPredicted RBP17.08■□□□□ 0.32
SHANK1-203ENST00000391813 NPVFQ9HCQ7 196 aa17.08■□□□□ 0.32
SHANK1-203ENST00000391813 PRNDQ9UKY0 176 aa17.08■□□□□ 0.32
SHANK1-203ENST00000391813 SOD3P08294 240 aa17.07■□□□□ 0.32
SHANK1-203ENST00000391813 SPNS3Q6ZMD2 512 aa17.07■□□□□ 0.32
SHANK1-203ENST00000391813 C16orf47Q6ZP98 133 aaPredicted RBP17.07■□□□□ 0.32
SHANK1-203ENST00000391813 OR52L2PQ8NGH6 319 aa17.07■□□□□ 0.32
SHANK1-203ENST00000391813 GNB4Q9HAV0 340 aa17.07■□□□□ 0.32
SHANK1-203ENST00000391813 PEBP1P30086 187 aaKnown RBP17.07■□□□□ 0.32
SHANK1-203ENST00000391813 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.07■□□□□ 0.32
SHANK1-203ENST00000391813 S100A4P26447 101 aaKnown RBP17.07■□□□□ 0.32
SHANK1-203ENST00000391813 LURAP1LQ8IV03 231 aa17.07■□□□□ 0.32
SHANK1-203ENST00000391813 RNF122Q9H9V4 155 aa17.07■□□□□ 0.32
SHANK1-203ENST00000391813 A8MWL6 223 aa17.07■□□□□ 0.32
SHANK1-203ENST00000391813 SMIM12Q96EX1 92 aa17.07■□□□□ 0.32
SHANK1-203ENST00000391813 G6PCP35575 357 aa17.06■□□□□ 0.32
SHANK1-203ENST00000391813 TET1Q8NFU7 2136 aa17.06■□□□□ 0.32
SHANK1-203ENST00000391813 OR2H1Q9GZK4 316 aa17.06■□□□□ 0.32
SHANK1-203ENST00000391813 ATP23Q9Y6H3 246 aa17.06■□□□□ 0.32
SHANK1-203ENST00000391813 IGHV3-43A0A0B4J1X8 118 aa17.06■□□□□ 0.32
SHANK1-203ENST00000391813 RAB29O14966 203 aa17.06■□□□□ 0.32
SHANK1-203ENST00000391813 SMIM17P0DL12 118 aa17.06■□□□□ 0.32
SHANK1-203ENST00000391813 IGHV3-43DP0DP04 118 aa17.06■□□□□ 0.32
SHANK1-203ENST00000391813 FABP2P12104 132 aa17.06■□□□□ 0.32
SHANK1-203ENST00000391813 RPL11P62913 178 aaKnown RBP17.06■□□□□ 0.32
SHANK1-203ENST00000391813 OR5R1Q8NH85 324 aa17.06■□□□□ 0.32
SHANK1-203ENST00000391813 WFIKKN1Q96NZ8 548 aa17.06■□□□□ 0.32
SHANK1-203ENST00000391813 PARLQ9H300 379 aa17.06■□□□□ 0.32
SHANK1-203ENST00000391813 CA2P00918 260 aa17.06■□□□□ 0.32
SHANK1-203ENST00000391813 ZNF883P0CG24 379 aa17.06■□□□□ 0.32
SHANK1-203ENST00000391813 TMEM187Q14656 261 aa17.06■□□□□ 0.32
SHANK1-203ENST00000391813 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.06■□□□□ 0.32
SHANK1-203ENST00000391813 TMEM116Q8NCL8 245 aa17.06■□□□□ 0.32
SHANK1-203ENST00000391813 GALNT14Q96FL9 552 aa17.06■□□□□ 0.32
SHANK1-203ENST00000391813 OR4C12Q96R67 309 aa17.06■□□□□ 0.32
SHANK1-203ENST00000391813 PRSS12P56730 875 aa17.05■□□□□ 0.32
SHANK1-203ENST00000391813 SAP25Q8TEE9 199 aa17.05■□□□□ 0.32
SHANK1-203ENST00000391813 SRP19P09132 144 aaKnown RBP17.05■□□□□ 0.32
SHANK1-203ENST00000391813 TNFRSF1AP19438 455 aa17.05■□□□□ 0.32
SHANK1-203ENST00000391813 FAM27BQ5VT28 67 aa17.05■□□□□ 0.32
SHANK1-203ENST00000391813 NR2C2APQ86WQ0 139 aa17.05■□□□□ 0.32
SHANK1-203ENST00000391813 CXorf67Q86X51 503 aaPredicted RBP17.05■□□□□ 0.32
SHANK1-203ENST00000391813 C5orf17Q8NAS9 161 aa17.05■□□□□ 0.32
SHANK1-203ENST00000391813 OR52M1Q8NGK5 317 aa17.05■□□□□ 0.32
SHANK1-203ENST00000391813 PERPQ96FX8 193 aa17.05■□□□□ 0.32
SHANK1-203ENST00000391813 MRPS11P82912 194 aaKnown RBP17.05■□□□□ 0.32
SHANK1-203ENST00000391813 CSRP2Q16527 193 aa17.05■□□□□ 0.32
SHANK1-203ENST00000391813 CRIPAKQ8N1N5 446 aa17.05■□□□□ 0.32
SHANK1-203ENST00000391813 KCNK17Q96T54 332 aa17.05■□□□□ 0.32
SHANK1-203ENST00000391813 F8VVB4 439 aa17.05■□□□□ 0.32
SHANK1-203ENST00000391813 F8VWA3 439 aa17.05■□□□□ 0.32
SHANK1-203ENST00000391813 CYP2G1PQ6ZSU1 146 aa17.05■□□□□ 0.32
SHANK1-203ENST00000391813 WFDC8Q8IUA0 241 aa17.05■□□□□ 0.32
SHANK1-203ENST00000391813 RBKSQ9H477 322 aa17.05■□□□□ 0.32
SHANK1-203ENST00000391813 CLN8Q9UBY8 286 aa17.05■□□□□ 0.32
SHANK1-203ENST00000391813 PSME4Q14997 1843 aa17.04■□□□□ 0.32
SHANK1-203ENST00000391813 DHRS7CA6NNS2 312 aa17.04■□□□□ 0.32
SHANK1-203ENST00000391813 RBP4P02753 201 aa17.04■□□□□ 0.32
SHANK1-203ENST00000391813 ORM2P19652 201 aa17.04■□□□□ 0.32
SHANK1-203ENST00000391813 OR8I2Q8N0Y5 310 aa17.04■□□□□ 0.32
SHANK1-203ENST00000391813 MISP3Q96FF7 219 aa17.04■□□□□ 0.32
SHANK1-203ENST00000391813 CXXC4Q9H2H0 198 aa17.04■□□□□ 0.32
SHANK1-203ENST00000391813 RALYQ9UKM9 306 aaKnown RBP17.04■□□□□ 0.32
SHANK1-203ENST00000391813 EML2O95834 649 aa17.04■□□□□ 0.32
SHANK1-203ENST00000391813 DMRTA1Q5VZB9 504 aa17.04■□□□□ 0.32
SHANK1-203ENST00000391813 FOXJ2Q9P0K8 574 aa17.04■□□□□ 0.32
SHANK1-203ENST00000391813 SLC25A33Q9BSK2 321 aa17.04■□□□□ 0.32
SHANK1-203ENST00000391813 QTRT1Q9BXR0 403 aaKnown RBP17.04■□□□□ 0.32
SHANK1-203ENST00000391813 FAM206AQ9NX38 181 aa17.04■□□□□ 0.32
SHANK1-203ENST00000391813 PXMP4Q9Y6I8 212 aa17.04■□□□□ 0.32
SHANK1-203ENST00000391813 CTAG1AP78358 180 aa17.04■□□□□ 0.32
SHANK1-203ENST00000391813 OR2Z1Q8NG97 314 aa17.04■□□□□ 0.32
SHANK1-203ENST00000391813 RASL10BQ96S79 203 aa17.04■□□□□ 0.32
SHANK1-203ENST00000391813 C5orf52A6NGY3 159 aa17.03■□□□□ 0.32
SHANK1-203ENST00000391813 IBA57Q5T440 356 aaKnown RBP17.03■□□□□ 0.32
SHANK1-203ENST00000391813 MTURNQ8N3F0 131 aa17.03■□□□□ 0.32
SHANK1-203ENST00000391813 SELENOHQ8IZQ5 122 aaKnown RBP17.03■□□□□ 0.32
SHANK1-203ENST00000391813 GAL3ST2Q9H3Q3 398 aa17.03■□□□□ 0.32
SHANK1-203ENST00000391813 G6PC2Q9NQR9 355 aa17.03■□□□□ 0.32
SHANK1-203ENST00000391813 BRCA1P38398 1863 aaKnown RBP17.03■□□□□ 0.32
SHANK1-203ENST00000391813 LEPROTL1O95214 131 aa17.03■□□□□ 0.32
SHANK1-203ENST00000391813 FGF12P61328 243 aa17.03■□□□□ 0.32
SHANK1-203ENST00000391813 PQLC2Q6ZP29 291 aa17.03■□□□□ 0.32
SHANK1-203ENST00000391813 LRRC29Q8WV35 223 aa17.03■□□□□ 0.32
SHANK1-203ENST00000391813 FOXS1O43638 330 aa17.02■□□□□ 0.32
SHANK1-203ENST00000391813 DPF1Q92782 380 aa17.02■□□□□ 0.32
SHANK1-203ENST00000391813 hADV38S2A0JD32 116 aa17.02■□□□□ 0.32
SHANK1-203ENST00000391813 ALPK2Q86TB3 2170 aa17.02■□□□□ 0.32
SHANK1-203ENST00000391813 SLC22A18ASQ8N1D0 253 aa17.02■□□□□ 0.32
SHANK1-203ENST00000391813 TMEM45BQ96B21 275 aa17.02■□□□□ 0.32
SHANK1-203ENST00000391813 TPRP12270 2363 aaKnown RBP17.02■□□□□ 0.32
SHANK1-203ENST00000391813 NCBP2LA6PVI3 153 aaKnown RBP17.02■□□□□ 0.31
SHANK1-203ENST00000391813 GPR146Q96CH1 333 aa17.02■□□□□ 0.31
SHANK1-203ENST00000391813 M0R1B8 84 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms