RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 SAA2P0DJI9 122 aaPredicted RBP9.43□□□□□ -0.9
DEPDC4-202ENST00000378244 S100A5P33763 92 aa9.43□□□□□ -0.9
DEPDC4-202ENST00000378244 HES1Q14469 280 aa9.43□□□□□ -0.9
DEPDC4-202ENST00000378244 TGIF2LXQ8IUE1 241 aa9.43□□□□□ -0.9
DEPDC4-202ENST00000378244 ODF3L1Q8IXM7 274 aa9.43□□□□□ -0.9
DEPDC4-202ENST00000378244 LINC00311Q8N616 119 aa9.43□□□□□ -0.9
DEPDC4-202ENST00000378244 OR52I2Q8NH67 350 aa9.43□□□□□ -0.9
DEPDC4-202ENST00000378244 CAPSLQ8WWF8 208 aa9.43□□□□□ -0.9
DEPDC4-202ENST00000378244 AGMATQ9BSE5 352 aa9.43□□□□□ -0.9
DEPDC4-202ENST00000378244 CABLES2Q9BTV7 478 aa9.43□□□□□ -0.9
DEPDC4-202ENST00000378244 NXF2Q9GZY0 626 aaKnown RBP9.43□□□□□ -0.9
DEPDC4-202ENST00000378244 MMP27Q9H306 513 aa9.43□□□□□ -0.9
DEPDC4-202ENST00000378244 VPREB3Q9UKI3 123 aa9.43□□□□□ -0.9
DEPDC4-202ENST00000378244 STAB1Q9NY15 2570 aa9.43□□□□□ -0.9
DEPDC4-202ENST00000378244 TENM1Q9UKZ4 2725 aa9.43□□□□□ -0.9
DEPDC4-202ENST00000378244 FABP12A6NFH5 140 aa9.43□□□□□ -0.9
DEPDC4-202ENST00000378244 PMP2P02689 132 aa9.43□□□□□ -0.9
DEPDC4-202ENST00000378244 GAPDHP04406 335 aaKnown RBP9.43□□□□□ -0.9
DEPDC4-202ENST00000378244 IL3RAP26951 378 aa9.43□□□□□ -0.9
DEPDC4-202ENST00000378244 LINC00205P59089 165 aa9.43□□□□□ -0.9
DEPDC4-202ENST00000378244 SRSF7Q16629 238 aaKnown RBP eCLIP9.43□□□□□ -0.9
DEPDC4-202ENST00000378244 Q6ZS49 121 aa9.43□□□□□ -0.9
DEPDC4-202ENST00000378244 ARL6IP6Q8N6S5 226 aa9.43□□□□□ -0.9
DEPDC4-202ENST00000378244 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.43□□□□□ -0.9
DEPDC4-202ENST00000378244 C8orf31Q8N9H6 132 aa9.43□□□□□ -0.9
DEPDC4-202ENST00000378244 GPX8Q8TED1 209 aa9.43□□□□□ -0.9
DEPDC4-202ENST00000378244 RTN4IP1Q8WWV3 396 aaPredicted RBP9.43□□□□□ -0.9
DEPDC4-202ENST00000378244 EDARADDQ8WWZ3 215 aa9.43□□□□□ -0.9
DEPDC4-202ENST00000378244 ST6GALNAC6Q969X2 333 aa9.43□□□□□ -0.9
DEPDC4-202ENST00000378244 POMT1Q9Y6A1 747 aa9.43□□□□□ -0.9
DEPDC4-202ENST00000378244 IGHV1-3A0A0C4DH29 117 aa9.42□□□□□ -0.9
DEPDC4-202ENST00000378244 A0A1W2PPI3 338 aa9.42□□□□□ -0.9
DEPDC4-202ENST00000378244 GPR137BO60478 399 aa9.42□□□□□ -0.9
DEPDC4-202ENST00000378244 RNASE1P07998 156 aaKnown RBP9.42□□□□□ -0.9
DEPDC4-202ENST00000378244 BRS3P32247 399 aa9.42□□□□□ -0.9
DEPDC4-202ENST00000378244 CBX5P45973 191 aa9.42□□□□□ -0.9
DEPDC4-202ENST00000378244 ARHGDIBP52566 201 aa9.42□□□□□ -0.9
DEPDC4-202ENST00000378244 DGCR2P98153 550 aa9.42□□□□□ -0.9
DEPDC4-202ENST00000378244 Q3ZCU0 254 aa9.42□□□□□ -0.9
DEPDC4-202ENST00000378244 CCDC144NLQ6NUI1 221 aa9.42□□□□□ -0.9
DEPDC4-202ENST00000378244 FAM131AQ6UXB0 335 aa9.42□□□□□ -0.9
DEPDC4-202ENST00000378244 CCBE1Q6UXH8 406 aaPredicted RBP9.42□□□□□ -0.9
DEPDC4-202ENST00000378244 FAM210AQ96ND0 272 aa9.42□□□□□ -0.9
DEPDC4-202ENST00000378244 MDFIQ99750 246 aa9.42□□□□□ -0.9
DEPDC4-202ENST00000378244 OR2D2Q9H210 308 aa9.42□□□□□ -0.9
DEPDC4-202ENST00000378244 A6NHS1 94 aa9.42□□□□□ -0.9
DEPDC4-202ENST00000378244 RNF212BA8MTL3 300 aa9.42□□□□□ -0.9
DEPDC4-202ENST00000378244 RAB29O14966 203 aa9.42□□□□□ -0.9
DEPDC4-202ENST00000378244 OR5H8P0DN80 308 aa9.42□□□□□ -0.9
DEPDC4-202ENST00000378244 ACTG1P63261 375 aa9.42□□□□□ -0.9
DEPDC4-202ENST00000378244 GLDNQ6ZMI3 551 aaPredicted RBP9.42□□□□□ -0.9
DEPDC4-202ENST00000378244 LYSMD2Q8IV50 215 aa9.42□□□□□ -0.9
DEPDC4-202ENST00000378244 OR5AP2Q8NGF4 316 aa9.42□□□□□ -0.9
DEPDC4-202ENST00000378244 OR5R1Q8NH85 324 aa9.42□□□□□ -0.9
DEPDC4-202ENST00000378244 EHFQ9NZC4 300 aa9.42□□□□□ -0.9
DEPDC4-202ENST00000378244 CLDN34H7C241 214 aa9.41□□□□□ -0.9
DEPDC4-202ENST00000378244 CRYBA1P05813 215 aa9.41□□□□□ -0.9
DEPDC4-202ENST00000378244 SNRNP70P08621 437 aaKnown RBP9.41□□□□□ -0.9
DEPDC4-202ENST00000378244 CTXN2P0C2S0 81 aa9.41□□□□□ -0.9
DEPDC4-202ENST00000378244 FCGR2CP31995 323 aa9.41□□□□□ -0.9
DEPDC4-202ENST00000378244 HRH1P35367 487 aa9.41□□□□□ -0.9
DEPDC4-202ENST00000378244 GPR12P47775 334 aa9.41□□□□□ -0.9
DEPDC4-202ENST00000378244 RAB7AP51149 207 aa9.41□□□□□ -0.9
DEPDC4-202ENST00000378244 H1FOOQ8IZA3 346 aaPredicted RBP9.41□□□□□ -0.9
DEPDC4-202ENST00000378244 FCAMRQ8WWV6 532 aa9.41□□□□□ -0.9
DEPDC4-202ENST00000378244 MRPL20Q9BYC9 149 aaKnown RBP9.41□□□□□ -0.9
DEPDC4-202ENST00000378244 NECAP2Q9NVZ3 263 aa9.41□□□□□ -0.9
DEPDC4-202ENST00000378244 PIPOXQ9P0Z9 390 aa9.41□□□□□ -0.9
DEPDC4-202ENST00000378244 ZNF221Q9UK13 617 aa9.41□□□□□ -0.9
DEPDC4-202ENST00000378244 TCF19Q9Y242 345 aa9.41□□□□□ -0.9
DEPDC4-202ENST00000378244 CHST1O43916 411 aa9.4□□□□□ -0.9
DEPDC4-202ENST00000378244 PROP1O75360 226 aa9.4□□□□□ -0.9
DEPDC4-202ENST00000378244 RBBP9O75884 186 aa9.4□□□□□ -0.9
DEPDC4-202ENST00000378244 IGKV1D-33P01593 117 aa9.4□□□□□ -0.9
DEPDC4-202ENST00000378244 IGKV1-33P01594 117 aa9.4□□□□□ -0.9
DEPDC4-202ENST00000378244 FXYD4P59646 89 aa9.4□□□□□ -0.9
DEPDC4-202ENST00000378244 OR5H2Q8NGV7 314 aa9.4□□□□□ -0.9
DEPDC4-202ENST00000378244 CFHR4Q92496 578 aa9.4□□□□□ -0.9
DEPDC4-202ENST00000378244 S1PR3Q99500 378 aa9.4□□□□□ -0.9
DEPDC4-202ENST00000378244 C19orf24Q9BVV8 132 aa9.4□□□□□ -0.9
DEPDC4-202ENST00000378244 SCPEP1Q9HB40 452 aa9.4□□□□□ -0.9
DEPDC4-202ENST00000378244 IGKV1D-13A0A0B4J2D9 117 aa9.4□□□□□ -0.9
DEPDC4-202ENST00000378244 OOSP1A8MZH6 123 aa9.4□□□□□ -0.9
DEPDC4-202ENST00000378244 M0QYG6 137 aa9.4□□□□□ -0.9
DEPDC4-202ENST00000378244 IGKV1-13P0DP09 117 aa9.4□□□□□ -0.9
DEPDC4-202ENST00000378244 ZNF816Q0VGE8 651 aaPredicted RBP9.4□□□□□ -0.9
DEPDC4-202ENST00000378244 PYHIN1Q6K0P9 492 aa9.4□□□□□ -0.9
DEPDC4-202ENST00000378244 TMEM17Q86X19 198 aa9.4□□□□□ -0.9
DEPDC4-202ENST00000378244 OR8H3Q8N146 312 aa9.4□□□□□ -0.9
DEPDC4-202ENST00000378244 TMEM86BQ8N661 226 aa9.4□□□□□ -0.9
DEPDC4-202ENST00000378244 FAM216AQ8WUB2 273 aa9.4□□□□□ -0.9
DEPDC4-202ENST00000378244 ZNF251Q9BRH9 671 aa9.4□□□□□ -0.9
DEPDC4-202ENST00000378244 OR2W1Q9Y3N9 320 aa9.4□□□□□ -0.9
DEPDC4-202ENST00000378244 HNRNPCP07910 306 aaKnown RBP eCLIP9.39□□□□□ -0.91
DEPDC4-202ENST00000378244 FAM106CPP0CH98 169 aa9.39□□□□□ -0.91
DEPDC4-202ENST00000378244 ZNF137PP52743 207 aa9.39□□□□□ -0.91
DEPDC4-202ENST00000378244 RELBQ01201 579 aa9.39□□□□□ -0.91
DEPDC4-202ENST00000378244 CDK10Q15131 360 aa9.39□□□□□ -0.91
DEPDC4-202ENST00000378244 AANATQ16613 207 aa9.39□□□□□ -0.91
DEPDC4-202ENST00000378244 LY6G6FQ5SQ64 297 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms