RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 NCKAP5O14513 1909 aa13.98□□□□□ -0.17
TRIM39-201ENST00000376656 GJE1A6NN92 205 aa13.98□□□□□ -0.17
TRIM39-201ENST00000376656 CBR3O75828 277 aa13.98□□□□□ -0.17
TRIM39-201ENST00000376656 CLDN1O95832 211 aa13.98□□□□□ -0.17
TRIM39-201ENST00000376656 NPPCP23582 126 aa13.98□□□□□ -0.17
TRIM39-201ENST00000376656 WNT5AP41221 380 aa13.98□□□□□ -0.17
TRIM39-201ENST00000376656 SSR4P51571 173 aa13.98□□□□□ -0.17
TRIM39-201ENST00000376656 SMRP1Q8NCR6 262 aa13.98□□□□□ -0.17
TRIM39-201ENST00000376656 OR10G9Q8NGN4 311 aa13.98□□□□□ -0.17
TRIM39-201ENST00000376656 OR10G7Q8NGN6 311 aa13.98□□□□□ -0.17
TRIM39-201ENST00000376656 RBM14Q96PK6 669 aaKnown RBP13.98□□□□□ -0.17
TRIM39-201ENST00000376656 TMEM9BQ9NQ34 198 aa13.98□□□□□ -0.17
TRIM39-201ENST00000376656 CEP192Q8TEP8 1941 aa13.98□□□□□ -0.17
TRIM39-201ENST00000376656 KIR2DL5BA0A0G2JN68 375 aa13.98□□□□□ -0.17
TRIM39-201ENST00000376656 KIR2DL5BA0A0G2JPC4 375 aa13.98□□□□□ -0.17
TRIM39-201ENST00000376656 IGHV5-10-1A0A0J9YXX1 117 aa13.98□□□□□ -0.17
TRIM39-201ENST00000376656 RAB4AP20338 218 aa13.98□□□□□ -0.17
TRIM39-201ENST00000376656 PMP22Q01453 160 aa13.98□□□□□ -0.17
TRIM39-201ENST00000376656 C9orf135Q5VTT2 229 aa13.98□□□□□ -0.17
TRIM39-201ENST00000376656 BTNL3Q6UXE8 466 aa13.98□□□□□ -0.17
TRIM39-201ENST00000376656 KIR2DL5AQ8N109 375 aa13.98□□□□□ -0.17
TRIM39-201ENST00000376656 ZNF552Q9H707 407 aaPredicted RBP13.98□□□□□ -0.17
TRIM39-201ENST00000376656 KCNS2Q9ULS6 477 aa13.98□□□□□ -0.17
TRIM39-201ENST00000376656 TIMM9Q9Y5J7 89 aa13.98□□□□□ -0.17
TRIM39-201ENST00000376656 IGHV1-45A0A0A0MS14 117 aa13.97□□□□□ -0.17
TRIM39-201ENST00000376656 LILRA1O75019 489 aa13.97□□□□□ -0.17
TRIM39-201ENST00000376656 TMEM14EPQ6UXP3 125 aa13.97□□□□□ -0.17
TRIM39-201ENST00000376656 RIMS4Q9H426 269 aaPredicted RBP13.97□□□□□ -0.17
TRIM39-201ENST00000376656 SH2D2AQ9NP31 389 aa13.97□□□□□ -0.17
TRIM39-201ENST00000376656 NAGKQ9UJ70 344 aa13.97□□□□□ -0.17
TRIM39-201ENST00000376656 DOCK11Q5JSL3 2073 aa13.97□□□□□ -0.17
TRIM39-201ENST00000376656 EGR1P18146 543 aa13.97□□□□□ -0.17
TRIM39-201ENST00000376656 RPL15P61313 204 aaKnown RBP13.97□□□□□ -0.17
TRIM39-201ENST00000376656 RPS16P62249 146 aaKnown RBP13.97□□□□□ -0.17
TRIM39-201ENST00000376656 CCL7P80098 99 aa13.97□□□□□ -0.17
TRIM39-201ENST00000376656 LRP11Q86VZ4 500 aa13.97□□□□□ -0.17
TRIM39-201ENST00000376656 ABHD3Q8WU67 409 aa13.97□□□□□ -0.17
TRIM39-201ENST00000376656 SGCZQ96LD1 299 aa13.97□□□□□ -0.17
TRIM39-201ENST00000376656 STRADBQ9C0K7 418 aa13.97□□□□□ -0.17
TRIM39-201ENST00000376656 RBM7Q9Y580 266 aaKnown RBP13.97□□□□□ -0.17
TRIM39-201ENST00000376656 FREM1Q5H8C1 2179 aa13.97□□□□□ -0.17
TRIM39-201ENST00000376656 PIGBOS1A0A0B4J2F0 54 aa13.97□□□□□ -0.17
TRIM39-201ENST00000376656 TMEM210A6NLX4 147 aa13.97□□□□□ -0.17
TRIM39-201ENST00000376656 RPL29P47914 159 aaKnown RBP13.97□□□□□ -0.17
TRIM39-201ENST00000376656 MRPL21Q7Z2W9 205 aaKnown RBP13.97□□□□□ -0.17
TRIM39-201ENST00000376656 NEIL1Q96FI4 390 aaPredicted RBP13.97□□□□□ -0.17
TRIM39-201ENST00000376656 UBE2ZQ9H832 354 aaPredicted RBP13.97□□□□□ -0.17
TRIM39-201ENST00000376656 MANBALQ9NQG1 85 aa13.97□□□□□ -0.17
TRIM39-201ENST00000376656 PRDM6Q9NQX0 595 aa13.97□□□□□ -0.17
TRIM39-201ENST00000376656 OCIAD1Q9NX40 245 aa13.97□□□□□ -0.17
TRIM39-201ENST00000376656 DNPH1O43598 174 aa13.96□□□□□ -0.17
TRIM39-201ENST00000376656 WDR1O75083 606 aa13.96□□□□□ -0.17
TRIM39-201ENST00000376656 FFAR4Q5NUL3 377 aa13.96□□□□□ -0.17
TRIM39-201ENST00000376656 KCNIP4Q6PIL6 250 aa13.96□□□□□ -0.17
TRIM39-201ENST00000376656 OR10D3Q8NH80 312 aa13.96□□□□□ -0.17
TRIM39-201ENST00000376656 IMMP1LQ96LU5 166 aa13.96□□□□□ -0.17
TRIM39-201ENST00000376656 CCDC74BQ96LY2 380 aa13.96□□□□□ -0.17
TRIM39-201ENST00000376656 TRAPPC1Q9Y5R8 145 aa13.96□□□□□ -0.17
TRIM39-201ENST00000376656 A0A096LPE4 126 aa13.96□□□□□ -0.18
TRIM39-201ENST00000376656 TRBV6-6A0A0A6YYG2 114 aa13.96□□□□□ -0.18
TRIM39-201ENST00000376656 A0A0U1RQK1 487 aa13.96□□□□□ -0.18
TRIM39-201ENST00000376656 A0A1W2PPZ6 126 aa13.96□□□□□ -0.18
TRIM39-201ENST00000376656 ZNF320A2RRD8 509 aa13.96□□□□□ -0.18
TRIM39-201ENST00000376656 WNT2P09544 360 aa13.96□□□□□ -0.18
TRIM39-201ENST00000376656 CD33P20138 364 aa13.96□□□□□ -0.18
TRIM39-201ENST00000376656 BMP5P22003 454 aa13.96□□□□□ -0.18
TRIM39-201ENST00000376656 TFF3Q07654 80 aa13.96□□□□□ -0.18
TRIM39-201ENST00000376656 IGFBP7Q16270 282 aa13.96□□□□□ -0.18
TRIM39-201ENST00000376656 RIPPLY2Q5TAB7 128 aa13.96□□□□□ -0.18
TRIM39-201ENST00000376656 DLL3Q9NYJ7 618 aa13.96□□□□□ -0.18
TRIM39-201ENST00000376656 C5orf49A4QMS7 147 aa13.95□□□□□ -0.18
TRIM39-201ENST00000376656 GCH1P30793 250 aa13.95□□□□□ -0.18
TRIM39-201ENST00000376656 OR5P3Q8WZ94 311 aa13.95□□□□□ -0.18
TRIM39-201ENST00000376656 LOC102723996A0A087X1L8 192 aa13.95□□□□□ -0.18
TRIM39-201ENST00000376656 A6NNC1 897 aa13.95□□□□□ -0.18
TRIM39-201ENST00000376656 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.95□□□□□ -0.18
TRIM39-201ENST00000376656 PDGFBP01127 241 aaPredicted RBP13.95□□□□□ -0.18
TRIM39-201ENST00000376656 UMODP07911 640 aa13.95□□□□□ -0.18
TRIM39-201ENST00000376656 COX6A1P12074 109 aa13.95□□□□□ -0.18
TRIM39-201ENST00000376656 FGFRL1Q8N441 504 aa13.95□□□□□ -0.18
TRIM39-201ENST00000376656 ZNF705FA8MVS1 300 aaPredicted RBP13.95□□□□□ -0.18
TRIM39-201ENST00000376656 RFPL3SP0C7P2 107 aa13.95□□□□□ -0.18
TRIM39-201ENST00000376656 ZNF705DP0CH99 300 aaPredicted RBP13.95□□□□□ -0.18
TRIM39-201ENST00000376656 ZNF705BP0CI00 300 aaPredicted RBP13.95□□□□□ -0.18
TRIM39-201ENST00000376656 CST9LP1Q5W188 147 aa13.95□□□□□ -0.18
TRIM39-201ENST00000376656 MS4A10Q96PG2 267 aa13.95□□□□□ -0.18
TRIM39-201ENST00000376656 TBX15Q96SF7 602 aa13.95□□□□□ -0.18
TRIM39-201ENST00000376656 PRRG4Q9BZD6 226 aa13.95□□□□□ -0.18
TRIM39-201ENST00000376656 IL17BQ9UHF5 180 aa13.95□□□□□ -0.18
TRIM39-201ENST00000376656 TNRC6BQ9UPQ9 1833 aaKnown RBP13.94□□□□□ -0.18
TRIM39-201ENST00000376656 DEGS1O15121 323 aa13.94□□□□□ -0.18
TRIM39-201ENST00000376656 VENTXO95231 258 aa13.94□□□□□ -0.18
TRIM39-201ENST00000376656 NGFP01138 241 aa13.94□□□□□ -0.18
TRIM39-201ENST00000376656 CRYAAP02489 173 aa13.94□□□□□ -0.18
TRIM39-201ENST00000376656 MPLP40238 635 aa13.94□□□□□ -0.18
TRIM39-201ENST00000376656 ZNF705AQ6ZN79 300 aaPredicted RBP13.94□□□□□ -0.18
TRIM39-201ENST00000376656 LIN7CQ9NUP9 197 aaKnown RBP13.94□□□□□ -0.18
TRIM39-201ENST00000376656 CLN8Q9UBY8 286 aa13.94□□□□□ -0.18
TRIM39-201ENST00000376656 ESPL1Q14674 2120 aa13.94□□□□□ -0.18
TRIM39-201ENST00000376656 C11orf94C9JXX5 98 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms