RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 AHRRA9YTQ3 701 aa14.77□□□□□ -0.04
MCF2L-203ENST00000375604 GCM2O75603 506 aaPredicted RBP14.77□□□□□ -0.04
MCF2L-203ENST00000375604 CXorf1O96002 111 aa14.77□□□□□ -0.04
MCF2L-203ENST00000375604 PPIAL4GP0DN37 164 aa14.77□□□□□ -0.04
MCF2L-203ENST00000375604 OR10J1P30954 320 aa14.77□□□□□ -0.04
MCF2L-203ENST00000375604 PPOXP50336 477 aa14.77□□□□□ -0.04
MCF2L-203ENST00000375604 ANKRD55Q3KP44 614 aa14.77□□□□□ -0.04
MCF2L-203ENST00000375604 LINC00596Q86U02 117 aa14.77□□□□□ -0.04
MCF2L-203ENST00000375604 OR4B1Q8NGF8 309 aa14.77□□□□□ -0.04
MCF2L-203ENST00000375604 KNL1Q8NG31 2342 aa14.77□□□□□ -0.05
MCF2L-203ENST00000375604 NRXN2Q9P2S2 1712 aa14.77□□□□□ -0.05
MCF2L-203ENST00000375604 RAMP1O60894 148 aa14.77□□□□□ -0.05
MCF2L-203ENST00000375604 APCSP02743 223 aa14.77□□□□□ -0.05
MCF2L-203ENST00000375604 ATP6V0CP27449 155 aa14.77□□□□□ -0.05
MCF2L-203ENST00000375604 ID1P41134 155 aa14.77□□□□□ -0.05
MCF2L-203ENST00000375604 CLPPQ16740 277 aaPredicted RBP14.77□□□□□ -0.05
MCF2L-203ENST00000375604 SLC25A47Q6Q0C1 308 aa14.77□□□□□ -0.05
MCF2L-203ENST00000375604 DHRS11Q6UWP2 260 aa14.77□□□□□ -0.05
MCF2L-203ENST00000375604 CRISP2P16562 243 aa14.77□□□□□ -0.05
MCF2L-203ENST00000375604 FCGR2BP31994 310 aaPredicted RBP14.77□□□□□ -0.05
MCF2L-203ENST00000375604 GLIPR1P48060 266 aa14.77□□□□□ -0.05
MCF2L-203ENST00000375604 FGF12P61328 243 aa14.77□□□□□ -0.05
MCF2L-203ENST00000375604 TM4SF20Q53R12 229 aa14.77□□□□□ -0.05
MCF2L-203ENST00000375604 STXBP6Q8NFX7 210 aa14.77□□□□□ -0.05
MCF2L-203ENST00000375604 GAPDHP04406 335 aaKnown RBP14.76□□□□□ -0.05
MCF2L-203ENST00000375604 SCGB1D4Q6XE38 83 aa14.76□□□□□ -0.05
MCF2L-203ENST00000375604 C9orf62Q8N4C0 152 aa14.76□□□□□ -0.05
MCF2L-203ENST00000375604 OR52M1Q8NGK5 317 aa14.76□□□□□ -0.05
MCF2L-203ENST00000375604 OR2T10Q8NGZ9 312 aa14.76□□□□□ -0.05
MCF2L-203ENST00000375604 Q9N2K0 584 aa14.76□□□□□ -0.05
MCF2L-203ENST00000375604 SF3B6Q9Y3B4 125 aaKnown RBP14.76□□□□□ -0.05
MCF2L-203ENST00000375604 IQCJQ1A5X6 159 aa14.76□□□□□ -0.05
MCF2L-203ENST00000375604 A0A1B0GU03 582 aa14.76□□□□□ -0.05
MCF2L-203ENST00000375604 HOXA4Q00056 320 aaPredicted RBP14.76□□□□□ -0.05
MCF2L-203ENST00000375604 C11orf91Q3C1V1 193 aa14.76□□□□□ -0.05
MCF2L-203ENST00000375604 VAX2Q9UIW0 290 aa14.76□□□□□ -0.05
MCF2L-203ENST00000375604 PXMP4Q9Y6I8 212 aa14.76□□□□□ -0.05
MCF2L-203ENST00000375604 PDCD11Q14690 1871 aaKnown RBP14.76□□□□□ -0.05
MCF2L-203ENST00000375604 GSX1Q9H4S2 264 aaPredicted RBP14.76□□□□□ -0.05
MCF2L-203ENST00000375604 ZFC3H1O60293 1989 aaKnown RBP14.76□□□□□ -0.05
MCF2L-203ENST00000375604 H3BQ15 152 aa14.76□□□□□ -0.05
MCF2L-203ENST00000375604 MPV17P39210 176 aa14.76□□□□□ -0.05
MCF2L-203ENST00000375604 HPRT1P00492 218 aa14.75□□□□□ -0.05
MCF2L-203ENST00000375604 ZNF658BQ4V348 819 aaPredicted RBP14.75□□□□□ -0.05
MCF2L-203ENST00000375604 FHL5Q5TD97 284 aa14.75□□□□□ -0.05
MCF2L-203ENST00000375604 ZDHHC8Q9ULC8 765 aa14.75□□□□□ -0.05
MCF2L-203ENST00000375604 IGHV3-49A0A0A0MS15 119 aa14.75□□□□□ -0.05
MCF2L-203ENST00000375604 HMSDA8MTL9 139 aa14.75□□□□□ -0.05
MCF2L-203ENST00000375604 SNURFLB1AK76 121 aa14.75□□□□□ -0.05
MCF2L-203ENST00000375604 MMP16P51512 607 aa14.75□□□□□ -0.05
MCF2L-203ENST00000375604 HIST3H3Q16695 136 aa14.75□□□□□ -0.05
MCF2L-203ENST00000375604 CXorf66Q5JRM2 361 aaPredicted RBP14.75□□□□□ -0.05
MCF2L-203ENST00000375604 A0A1W2PRX2 142 aa14.75□□□□□ -0.05
MCF2L-203ENST00000375604 DLL1O00548 723 aa14.75□□□□□ -0.05
MCF2L-203ENST00000375604 ERGP11308 486 aa14.75□□□□□ -0.05
MCF2L-203ENST00000375604 ABHD12Q8N2K0 398 aa14.75□□□□□ -0.05
MCF2L-203ENST00000375604 PNKDQ8N490 385 aa14.75□□□□□ -0.05
MCF2L-203ENST00000375604 OIT3Q8WWZ8 545 aa14.75□□□□□ -0.05
MCF2L-203ENST00000375604 ADAMTS7Q9UKP4 1686 aa14.75□□□□□ -0.05
MCF2L-203ENST00000375604 C5orf52A6NGY3 159 aa14.75□□□□□ -0.05
MCF2L-203ENST00000375604 HIST1H1BP16401 226 aaKnown RBP14.75□□□□□ -0.05
MCF2L-203ENST00000375604 BTF3P20290 206 aaKnown RBP14.75□□□□□ -0.05
MCF2L-203ENST00000375604 Q6ZN92 141 aa14.75□□□□□ -0.05
MCF2L-203ENST00000375604 REPIN1Q9BWE0 567 aaKnown RBP14.75□□□□□ -0.05
MCF2L-203ENST00000375604 HIST1H1EP10412 219 aaKnown RBP14.74□□□□□ -0.05
MCF2L-203ENST00000375604 RPL27AP46776 148 aaKnown RBP14.74□□□□□ -0.05
MCF2L-203ENST00000375604 ZNRF1Q8ND25 227 aa14.74□□□□□ -0.05
MCF2L-203ENST00000375604 OR10C1Q96KK4 312 aa14.74□□□□□ -0.05
MCF2L-203ENST00000375604 TIMP4Q99727 224 aa14.74□□□□□ -0.05
MCF2L-203ENST00000375604 GDF15Q99988 308 aa14.74□□□□□ -0.05
MCF2L-203ENST00000375604 CALYQ9NYX4 217 aa14.74□□□□□ -0.05
MCF2L-203ENST00000375604 IDI2-AS1Q9NZ38 188 aa14.74□□□□□ -0.05
MCF2L-203ENST00000375604 OPN4Q9UHM6 478 aa14.74□□□□□ -0.05
MCF2L-203ENST00000375604 OR4A5Q8NH83 315 aa14.74□□□□□ -0.05
MCF2L-203ENST00000375604 RBBP6Q7Z6E9 1792 aaKnown RBP14.74□□□□□ -0.05
MCF2L-203ENST00000375604 PRB4P10163 310 aaPredicted RBP14.74□□□□□ -0.05
MCF2L-203ENST00000375604 DCTN5Q9BTE1 182 aa14.74□□□□□ -0.05
MCF2L-203ENST00000375604 LOC105371242A0A075B767 164 aa14.74□□□□□ -0.05
MCF2L-203ENST00000375604 MFSD2BA6NFX1 497 aa14.74□□□□□ -0.05
MCF2L-203ENST00000375604 ZNF207O43670 478 aaKnown RBP14.74□□□□□ -0.05
MCF2L-203ENST00000375604 C1QL1O75973 258 aa14.74□□□□□ -0.05
MCF2L-203ENST00000375604 SSX8Q7RTT4 187 aa14.74□□□□□ -0.05
MCF2L-203ENST00000375604 CHAC2Q8WUX2 184 aa14.74□□□□□ -0.05
MCF2L-203ENST00000375604 PTX4Q96A99 478 aa14.74□□□□□ -0.05
MCF2L-203ENST00000375604 PIKFYVEQ9Y2I7 2098 aa14.74□□□□□ -0.05
MCF2L-203ENST00000375604 CCKARP32238 428 aa14.74□□□□□ -0.05
MCF2L-203ENST00000375604 SULT1A2P50226 295 aa14.74□□□□□ -0.05
MCF2L-203ENST00000375604 CLDN18P56856 261 aa14.74□□□□□ -0.05
MCF2L-203ENST00000375604 RIGQ13278 110 aa14.74□□□□□ -0.05
MCF2L-203ENST00000375604 RRN3P1Q2M238 152 aa14.74□□□□□ -0.05
MCF2L-203ENST00000375604 GTF2H5Q6ZYL4 71 aa14.74□□□□□ -0.05
MCF2L-203ENST00000375604 MAP1LC3CQ9BXW4 147 aa14.74□□□□□ -0.05
MCF2L-203ENST00000375604 RNF212Q495C1 297 aa14.73□□□□□ -0.05
MCF2L-203ENST00000375604 CCDC144NLQ6NUI1 221 aa14.73□□□□□ -0.05
MCF2L-203ENST00000375604 DPPA3Q6W0C5 159 aa14.73□□□□□ -0.05
MCF2L-203ENST00000375604 LOXL4Q96JB6 756 aa14.73□□□□□ -0.05
MCF2L-203ENST00000375604 RNF115Q9Y4L5 304 aa14.73□□□□□ -0.05
MCF2L-203ENST00000375604 H7C2G1 150 aa14.73□□□□□ -0.05
MCF2L-203ENST00000375604 PGLYRP1O75594 196 aaPredicted RBP14.73□□□□□ -0.05
MCF2L-203ENST00000375604 SURF2Q15527 256 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms