RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 PIGPP57054 158 aa8.7□□□□□ -1.02
COL5A1-202ENST00000371820 RAB5BP61020 215 aa8.7□□□□□ -1.02
COL5A1-202ENST00000371820 PDZK1IP1Q13113 114 aa8.7□□□□□ -1.02
COL5A1-202ENST00000371820 TMEM187Q14656 261 aa8.7□□□□□ -1.02
COL5A1-202ENST00000371820 KIR2DS1Q14954 304 aa8.7□□□□□ -1.02
COL5A1-202ENST00000371820 RSPO1Q2MKA7 263 aaPredicted RBP8.7□□□□□ -1.02
COL5A1-202ENST00000371820 MPV17LQ2QL34 196 aa8.7□□□□□ -1.02
COL5A1-202ENST00000371820 AVPI1Q5T686 147 aa8.7□□□□□ -1.02
COL5A1-202ENST00000371820 TMEM268Q5VZI3 342 aa8.7□□□□□ -1.02
COL5A1-202ENST00000371820 TEX29Q8N6K0 151 aa8.7□□□□□ -1.02
COL5A1-202ENST00000371820 RAB1CQ92928 201 aa8.7□□□□□ -1.02
COL5A1-202ENST00000371820 IL22RA2Q969J5 263 aa8.7□□□□□ -1.02
COL5A1-202ENST00000371820 SPSB4Q96A44 273 aa8.7□□□□□ -1.02
COL5A1-202ENST00000371820 MOB3AQ96BX8 217 aa8.7□□□□□ -1.02
COL5A1-202ENST00000371820 RAB39BQ96DA2 213 aa8.7□□□□□ -1.02
COL5A1-202ENST00000371820 RRNAD1Q96FB5 475 aaKnown RBP8.7□□□□□ -1.02
COL5A1-202ENST00000371820 C1orf159Q96HA4 380 aa8.7□□□□□ -1.02
COL5A1-202ENST00000371820 HIST1H2AAQ96QV6 131 aa8.7□□□□□ -1.02
COL5A1-202ENST00000371820 NKX3-1Q99801 234 aaPredicted RBP8.7□□□□□ -1.02
COL5A1-202ENST00000371820 NRIP2Q9BQI9 281 aa8.7□□□□□ -1.02
COL5A1-202ENST00000371820 SULT4A1Q9BR01 284 aa8.7□□□□□ -1.02
COL5A1-202ENST00000371820 GINS3Q9BRX5 216 aa8.7□□□□□ -1.02
COL5A1-202ENST00000371820 RSRP1Q9BUV0 290 aa8.7□□□□□ -1.02
COL5A1-202ENST00000371820 OR5AC2Q9NZP5 309 aa8.7□□□□□ -1.02
COL5A1-202ENST00000371820 FAM230AA0A1W2PPH8 454 aa8.69□□□□□ -1.02
COL5A1-202ENST00000371820 SPRY3O43610 288 aa8.69□□□□□ -1.02
COL5A1-202ENST00000371820 NGFP01138 241 aa8.69□□□□□ -1.02
COL5A1-202ENST00000371820 IGHV1-46P01743 117 aa8.69□□□□□ -1.02
COL5A1-202ENST00000371820 CD55P08174 381 aa8.69□□□□□ -1.02
COL5A1-202ENST00000371820 FCGR3AP08637 254 aa8.69□□□□□ -1.02
COL5A1-202ENST00000371820 TNFRSF1AP19438 455 aa8.69□□□□□ -1.02
COL5A1-202ENST00000371820 KITLGP21583 273 aa8.69□□□□□ -1.02
COL5A1-202ENST00000371820 SCGB2A2Q13296 93 aa8.69□□□□□ -1.02
COL5A1-202ENST00000371820 FAM120AOSQ5T036 256 aa8.69□□□□□ -1.02
COL5A1-202ENST00000371820 DPPA3Q6W0C5 159 aa8.69□□□□□ -1.02
COL5A1-202ENST00000371820 FBXW12Q6X9E4 464 aa8.69□□□□□ -1.02
COL5A1-202ENST00000371820 IL17RELQ6ZVW7 336 aa8.69□□□□□ -1.02
COL5A1-202ENST00000371820 C6orf201Q7Z4U5 140 aa8.69□□□□□ -1.02
COL5A1-202ENST00000371820 C1QL2Q7Z5L3 287 aa8.69□□□□□ -1.02
COL5A1-202ENST00000371820 PUSL1Q8N0Z8 303 aaKnown RBP8.69□□□□□ -1.02
COL5A1-202ENST00000371820 ZNF565Q8N9K5 539 aa8.69□□□□□ -1.02
COL5A1-202ENST00000371820 CLDND2Q8NHS1 167 aa8.69□□□□□ -1.02
COL5A1-202ENST00000371820 APOBEC3DQ96AK3 386 aaPredicted RBP8.69□□□□□ -1.02
COL5A1-202ENST00000371820 GNPNAT1Q96EK6 184 aaPredicted RBP8.69□□□□□ -1.02
COL5A1-202ENST00000371820 KIRREL1Q96J84 757 aa8.69□□□□□ -1.02
COL5A1-202ENST00000371820 FAAP24Q9BTP7 215 aa8.69□□□□□ -1.02
COL5A1-202ENST00000371820 C1QTNF5Q9BXJ0 243 aa8.69□□□□□ -1.02
COL5A1-202ENST00000371820 HRH4Q9H3N8 390 aa8.69□□□□□ -1.02
COL5A1-202ENST00000371820 GPR173Q9NS66 373 aa8.69□□□□□ -1.02
COL5A1-202ENST00000371820 AK3Q9UIJ7 227 aa8.69□□□□□ -1.02
COL5A1-202ENST00000371820 ST3GAL6Q9Y274 331 aa8.69□□□□□ -1.02
COL5A1-202ENST00000371820 STARD10Q9Y365 291 aa8.69□□□□□ -1.02
COL5A1-202ENST00000371820 SVEP1Q4LDE5 3571 aa8.68□□□□□ -1.02
COL5A1-202ENST00000371820 A0A1W2PP11 408 aa8.68□□□□□ -1.02
COL5A1-202ENST00000371820 HBE1P02100 147 aa8.68□□□□□ -1.02
COL5A1-202ENST00000371820 TK1P04183 234 aa8.68□□□□□ -1.02
COL5A1-202ENST00000371820 SLC25A6P12236 298 aa8.68□□□□□ -1.02
COL5A1-202ENST00000371820 RAC2P15153 192 aa8.68□□□□□ -1.02
COL5A1-202ENST00000371820 RAB13P51153 203 aa8.68□□□□□ -1.02
COL5A1-202ENST00000371820 TNFAIP6P98066 277 aaPredicted RBP8.68□□□□□ -1.02
COL5A1-202ENST00000371820 PSG7Q13046 419 aa8.68□□□□□ -1.02
COL5A1-202ENST00000371820 CR1LQ2VPA4 569 aa8.68□□□□□ -1.02
COL5A1-202ENST00000371820 RPL7L1Q6DKI1 246 aaKnown RBP8.68□□□□□ -1.02
COL5A1-202ENST00000371820 ATRAIDQ6UW56 229 aa8.68□□□□□ -1.02
COL5A1-202ENST00000371820 LDLRAD3Q86YD5 345 aa8.68□□□□□ -1.02
COL5A1-202ENST00000371820 CMTM1Q8IZ96 169 aa8.68□□□□□ -1.02
COL5A1-202ENST00000371820 LINC00518Q8N0U6 118 aa8.68□□□□□ -1.02
COL5A1-202ENST00000371820 ZNF561Q8N587 486 aa8.68□□□□□ -1.02
COL5A1-202ENST00000371820 OR5A2Q8NGI9 324 aa8.68□□□□□ -1.02
COL5A1-202ENST00000371820 OR51F2Q8NH61 342 aa8.68□□□□□ -1.02
COL5A1-202ENST00000371820 TCEAL7Q9BRU2 100 aa8.68□□□□□ -1.02
COL5A1-202ENST00000371820 SOX7Q9BT81 388 aa8.68□□□□□ -1.02
COL5A1-202ENST00000371820 C19orf24Q9BVV8 132 aa8.68□□□□□ -1.02
COL5A1-202ENST00000371820 PAPOLGQ9BWT3 736 aaKnown RBP8.68□□□□□ -1.02
COL5A1-202ENST00000371820 MS4A7Q9GZW8 240 aaPredicted RBP8.68□□□□□ -1.02
COL5A1-202ENST00000371820 TLNRD1Q9H1K6 362 aa8.68□□□□□ -1.02
COL5A1-202ENST00000371820 LSM5Q9Y4Y9 91 aaKnown RBP8.68□□□□□ -1.02
COL5A1-202ENST00000371820 NBEAL1Q6ZS30 2694 aa8.68□□□□□ -1.02
COL5A1-202ENST00000371820 TRAV20A0A0B4J274 112 aa8.67□□□□□ -1.02
COL5A1-202ENST00000371820 hCG_38984A0A1B0GV85 526 aa8.67□□□□□ -1.02
COL5A1-202ENST00000371820 C1orf196B1AJZ1 125 aa8.67□□□□□ -1.02
COL5A1-202ENST00000371820 IFNL4K9M1U5 179 aa8.67□□□□□ -1.02
COL5A1-202ENST00000371820 MPPED1O15442 326 aa8.67□□□□□ -1.02
COL5A1-202ENST00000371820 MT-ND4LP03901 98 aa8.67□□□□□ -1.02
COL5A1-202ENST00000371820 MSMBP08118 114 aa8.67□□□□□ -1.02
COL5A1-202ENST00000371820 WNT2P09544 360 aa8.67□□□□□ -1.02
COL5A1-202ENST00000371820 SPP1P10451 314 aa8.67□□□□□ -1.02
COL5A1-202ENST00000371820 SELEP16581 610 aa8.67□□□□□ -1.02
COL5A1-202ENST00000371820 IL2RGP31785 369 aa8.67□□□□□ -1.02
COL5A1-202ENST00000371820 SRP14P37108 136 aaKnown RBP8.67□□□□□ -1.02
COL5A1-202ENST00000371820 SNCAP37840 140 aa8.67□□□□□ -1.02
COL5A1-202ENST00000371820 CAMLGP49069 296 aa8.67□□□□□ -1.02
COL5A1-202ENST00000371820 VAMP2P63027 116 aa8.67□□□□□ -1.02
COL5A1-202ENST00000371820 BAXQ07812 192 aa8.67□□□□□ -1.02
COL5A1-202ENST00000371820 RHEBQ15382 184 aa8.67□□□□□ -1.02
COL5A1-202ENST00000371820 OR8G1Q15617 311 aa8.67□□□□□ -1.02
COL5A1-202ENST00000371820 TAF9Q16594 264 aa8.67□□□□□ -1.02
COL5A1-202ENST00000371820 PLCXD3Q63HM9 321 aa8.67□□□□□ -1.02
COL5A1-202ENST00000371820 CRIP3Q6Q6R5 217 aa8.67□□□□□ -1.02
COL5A1-202ENST00000371820 ZNF695Q8IW36 515 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms