RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 SHANK2-AS3Q9BTD1 123 aa2.39□□□□□ -2.03
RNU6-1249P-201ENST00000363237 ALX4Q9H161 411 aaPredicted RBP2.39□□□□□ -2.03
RNU6-1249P-201ENST00000363237 DCSTAMPQ9H295 470 aa2.39□□□□□ -2.03
RNU6-1249P-201ENST00000363237 ZNF430Q9H8G1 570 aaPredicted RBP2.39□□□□□ -2.03
RNU6-1249P-201ENST00000363237 PRR34Q9NV39 138 aa2.39□□□□□ -2.03
RNU6-1249P-201ENST00000363237 TP53TG3Q9ULZ0 132 aa2.39□□□□□ -2.03
RNU6-1249P-201ENST00000363237 CCDC144AA2RUR9 1427 aa2.39□□□□□ -2.03
RNU6-1249P-201ENST00000363237 PLCH2O75038 1416 aa2.39□□□□□ -2.03
RNU6-1249P-201ENST00000363237 ANKRD12Q6UB98 2062 aa2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 PBRM1Q86U86 1689 aa2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 ITGB4P16144 1822 aa2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 A0A087WUJ7 227 aa2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 IGHV3-21A0A0B4J1V1 117 aa2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 OR5H14A6NHG9 310 aa2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 IGLL5B9A064 214 aa2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 C15orf65H3BRN8 121 aa2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 MRASO14807 208 aa2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 MT-CO2P00403 227 aa2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 NRASP01111 189 aa2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 HRASP01112 189 aa2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 KRASP01116 189 aa2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 LHBP01229 141 aa2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 IGLV3-27P01718 113 aa2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 FAM228BP0C875 321 aa2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 CDK2P24941 298 aa2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 MAP2K4P45985 399 aa2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 GZMMP51124 257 aa2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 ZNF133P52736 654 aaPredicted RBP2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 ENDOGQ14249 297 aaKnown RBP2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 POU6F1Q14863 301 aa2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 SLC9A3R2Q15599 337 aa2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 C1orf194Q5T5A4 169 aa2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 SBSNQ6UWP8 590 aa2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 C5orf46Q6UWT4 87 aa2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 LYG2Q86SG7 212 aa2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 LY6G5BQ8NDX9 201 aa2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 FAM172AQ8WUF8 416 aa2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 MAL2Q969L2 176 aa2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 BORCS7Q96B45 105 aa2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 IP6K3Q96PC2 410 aa2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 CMSS1Q9BQ75 279 aaKnown RBP2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 C1orf50Q9BV19 199 aa2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 TMEM109Q9BVC6 243 aa2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 KIFC1Q9BW19 673 aa2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 NMNAT1Q9HAN9 279 aaPredicted RBP2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 INIPQ9NRY2 104 aa2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 PAQR5Q9NXK6 330 aaPredicted RBP2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 CARHSP1Q9Y2V2 147 aaKnown RBP2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 PRELID3BQ9Y3B1 194 aa2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 COL2A1P02458 1487 aaPredicted RBP2.38□□□□□ -2.03
RNU6-1249P-201ENST00000363237 SVILO95425 2214 aa2.37□□□□□ -2.03
RNU6-1249P-201ENST00000363237 DOCK8Q8NF50 2099 aa2.37□□□□□ -2.03
RNU6-1249P-201ENST00000363237 PIK3C2GO75747 1445 aa2.37□□□□□ -2.03
RNU6-1249P-201ENST00000363237 C2orf74A8MZ97 194 aa2.37□□□□□ -2.03
RNU6-1249P-201ENST00000363237 ZNF878C9JN71 531 aa2.37□□□□□ -2.03
RNU6-1249P-201ENST00000363237 MED6O75586 246 aa2.37□□□□□ -2.03
RNU6-1249P-201ENST00000363237 GPR75O95800 540 aa2.37□□□□□ -2.03
RNU6-1249P-201ENST00000363237 PDYNP01213 254 aa2.37□□□□□ -2.03
RNU6-1249P-201ENST00000363237 TTRP02766 147 aa2.37□□□□□ -2.03
RNU6-1249P-201ENST00000363237 GYPCP04921 128 aa2.37□□□□□ -2.03
RNU6-1249P-201ENST00000363237 OR10J1P30954 320 aa2.37□□□□□ -2.03
RNU6-1249P-201ENST00000363237 GABRA3P34903 492 aa2.37□□□□□ -2.03
RNU6-1249P-201ENST00000363237 CA7P43166 264 aa2.37□□□□□ -2.03
RNU6-1249P-201ENST00000363237 BTN3A2P78410 334 aa2.37□□□□□ -2.03
RNU6-1249P-201ENST00000363237 CDK10Q15131 360 aa2.37□□□□□ -2.03
RNU6-1249P-201ENST00000363237 PLPPR5Q32ZL2 321 aa2.37□□□□□ -2.03
RNU6-1249P-201ENST00000363237 FAM201AQ5SY85 155 aa2.37□□□□□ -2.03
RNU6-1249P-201ENST00000363237 FAM71E1Q6IPT2 247 aa2.37□□□□□ -2.03
RNU6-1249P-201ENST00000363237 ALKAL1Q6UXT8 129 aa2.37□□□□□ -2.03
RNU6-1249P-201ENST00000363237 AKAP14Q86UN6 197 aa2.37□□□□□ -2.03
RNU6-1249P-201ENST00000363237 OR4A5Q8NH83 315 aa2.37□□□□□ -2.03
RNU6-1249P-201ENST00000363237 NEK7Q8TDX7 302 aa2.37□□□□□ -2.03
RNU6-1249P-201ENST00000363237 SFRP2Q96HF1 295 aa2.37□□□□□ -2.03
RNU6-1249P-201ENST00000363237 SIGMAR1Q99720 223 aa2.37□□□□□ -2.03
RNU6-1249P-201ENST00000363237 B9D2Q9BPU9 175 aa2.37□□□□□ -2.03
RNU6-1249P-201ENST00000363237 NIPSNAP1Q9BPW8 284 aa2.37□□□□□ -2.03
RNU6-1249P-201ENST00000363237 FAM96AQ9H5X1 160 aa2.37□□□□□ -2.03
RNU6-1249P-201ENST00000363237 ARMC1Q9NVT9 282 aa2.37□□□□□ -2.03
RNU6-1249P-201ENST00000363237 GID8Q9NWU2 228 aa2.37□□□□□ -2.03
RNU6-1249P-201ENST00000363237 TAS2R1Q9NYW7 299 aa2.37□□□□□ -2.03
RNU6-1249P-201ENST00000363237 ANKRD30AQ9BXX3 1397 aa2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 DICER1Q9UPY3 1922 aaKnown RBP2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 TRIP11Q15643 1979 aa2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 DCCP43146 1447 aa2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 SCN1AP35498 2009 aa2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 LINC00862A6NCI5 91 aa2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 OR4C45A6NMZ5 311 aa2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 ZNF850A8MQ14 1090 aa2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 C4orf51C9J302 202 aa2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 M0R381 172 aa2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 BHLHE40O14503 412 aa2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 CIAO1O76071 339 aa2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 OR7C1O76099 320 aaPredicted RBP2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 APOMO95445 188 aa2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 FSTL3O95633 263 aa2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 IGHG2P01859 326 aa2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 OPN1SWP03999 348 aa2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 CCL1P22362 96 aa2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 OPRM1P35372 400 aa2.36□□□□□ -2.03
RNU6-1249P-201ENST00000363237 TGFBR2P37173 567 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms