RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 FGF22Q9HCT0 170 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 NUDT3O95989 172 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 DMWDQ09019 674 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 UBALD1Q8TB05 177 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 AAMDCQ9H7C9 122 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 YBX2Q9Y2T7 364 aaKnown RBP5.31□□□□□ -1.56
VPS13B-203ENST00000358544 GRPP07492 148 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 OR4P4Q8NGL7 312 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 HCFC1R1Q9NWW0 138 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 ZNF256Q9Y2P7 627 aaPredicted RBP5.3□□□□□ -1.56
VPS13B-203ENST00000358544 ZNF646O15015 1829 aaPredicted RBP5.3□□□□□ -1.56
VPS13B-203ENST00000358544 PPYP01298 95 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 LIPFP07098 398 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 FCGR3AP08637 254 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 GAGE1Q13065 139 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 TBC1D28Q2M2D7 210 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 BHLHA9Q7RTU4 235 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 OR2M3Q8NG83 312 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 HILPDAQ9Y5L2 63 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 TAF1LQ8IZX4 1826 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 DEFB108AA8MXU0 73 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 CTSVO60911 334 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 CD5P06127 495 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 HES4Q9HCC6 221 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 DPRXA6NFQ7 191 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 SRSF5Q13243 272 aaKnown RBP5.3□□□□□ -1.56
VPS13B-203ENST00000358544 TTC32Q5I0X7 151 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 ACSM6Q6P461 480 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 STXBP6Q8NFX7 210 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 GALMQ96C23 342 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 ALKBH3Q96Q83 286 aaPredicted RBP5.3□□□□□ -1.56
VPS13B-203ENST00000358544 RBBP6Q7Z6E9 1792 aaKnown RBP5.3□□□□□ -1.56
VPS13B-203ENST00000358544 IGHV2-70P01814 119 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 CEACAM1P13688 526 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 IGFBP6P24592 240 aaPredicted RBP5.3□□□□□ -1.56
VPS13B-203ENST00000358544 PMELP40967 661 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 ABHD17BQ5VST6 288 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 OR4F17Q8NGA8 305 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 KISS1RQ969F8 398 aaPredicted RBP5.3□□□□□ -1.56
VPS13B-203ENST00000358544 QTRT1Q9BXR0 403 aaKnown RBP5.3□□□□□ -1.56
VPS13B-203ENST00000358544 SBF2Q86WG5 1849 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 GPR183P32249 361 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 MAS1LP35410 378 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 TMEM215Q68D42 235 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 MRGPRFQ96AM1 343 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 SFRP2Q96HF1 295 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 ZNF257Q9Y2Q1 563 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 RALGAPA2Q2PPJ7 1873 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 GDF9O60383 454 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 HYAL1Q12794 435 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 RUNX3Q13761 415 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 PDPNQ86YL7 162 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 LRRC75AQ8NAA5 344 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 EDARADDQ8WWZ3 215 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 SMOC1Q9H4F8 434 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 CCL28Q9NRJ3 127 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 ALG1L2C9J202 215 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 ITGB1BP1O14713 200 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 IGFBP7Q16270 282 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 PRSS53Q2L4Q9 553 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 C10orf35Q96D05 121 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 DDX60LQ5H9U9 1706 aaKnown RBP5.3□□□□□ -1.56
VPS13B-203ENST00000358544 H3BUT2 72 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 NPY1RP25929 384 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 CKS1BP61024 79 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 SLC35B1P78383 322 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 WFDC6Q9BQY6 131 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 UFC1Q9Y3C8 167 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 C1QCP02747 245 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 F11P03951 625 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 NMUP48645 174 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 FAM78AQ5JUQ0 283 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 VASH2Q86V25 355 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 A8MWL6 223 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 TDGF1P13385 188 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 TMEM190Q8WZ59 177 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 RBKSQ9H477 322 aa5.3□□□□□ -1.56
VPS13B-203ENST00000358544 TRAV39A0A0B4J263 110 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 IGHV1-69-2A0A0G2JMI3 117 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 FNDC7Q5VTL7 733 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 OR2I1PQ8NGU4 316 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 WDYHV1Q96HA8 205 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 CDCA3Q99618 268 aaPredicted RBP5.29□□□□□ -1.56
VPS13B-203ENST00000358544 SIPA1L1O43166 1804 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 GREB1LQ9C091 1923 aaPredicted RBP5.29□□□□□ -1.56
VPS13B-203ENST00000358544 LINC00869P0C866 280 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 ESDP10768 282 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 ZNF774Q6NX45 483 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 VN1R4Q7Z5H5 301 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 TAF15Q92804 592 aaKnown RBP eCLIP5.29□□□□□ -1.56
VPS13B-203ENST00000358544 LINC00615Q96LM1 132 aaPredicted RBP5.29□□□□□ -1.56
VPS13B-203ENST00000358544 ADAMTS9Q9P2N4 1935 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 A0A1B0GX78 115 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 OCIAD2Q56VL3 154 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 TPTE2P1Q5T6R2 138 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 C10orf126Q8N4M7 172 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 R3HDMLQ9H3Y0 253 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 PPIL1Q9Y3C6 166 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 UBE2V1Q13404 147 aa5.29□□□□□ -1.56
VPS13B-203ENST00000358544 CST9Q5W186 159 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms