RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 AKAP9Q99996 3911 aa22.06■■□□□ 1.12
SSBP4-202ENST00000348495 TRAV6A0A075B6T7 132 aa22.06■■□□□ 1.12
SSBP4-202ENST00000348495 ARPC1BO15143 372 aaKnown RBP22.06■■□□□ 1.12
SSBP4-202ENST00000348495 TGFAP01135 160 aa22.06■■□□□ 1.12
SSBP4-202ENST00000348495 IGLV1-47P01700 117 aa22.06■■□□□ 1.12
SSBP4-202ENST00000348495 CTSDP07339 412 aaPredicted RBP22.06■■□□□ 1.12
SSBP4-202ENST00000348495 HOXB4P17483 251 aaPredicted RBP22.06■■□□□ 1.12
SSBP4-202ENST00000348495 ZNF818PQ6ZRF7 136 aa22.06■■□□□ 1.12
SSBP4-202ENST00000348495 ODF3L1Q8IXM7 274 aa22.06■■□□□ 1.12
SSBP4-202ENST00000348495 ZFAND1Q8TCF1 268 aa22.06■■□□□ 1.12
SSBP4-202ENST00000348495 ABHD14BQ96IU4 210 aa22.06■■□□□ 1.12
SSBP4-202ENST00000348495 OR2D2Q9H210 308 aa22.06■■□□□ 1.12
SSBP4-202ENST00000348495 CYSRT1A8MQ03 144 aa22.05■■□□□ 1.12
SSBP4-202ENST00000348495 RNASEK-C17orf49H0YIS7 233 aa22.05■■□□□ 1.12
SSBP4-202ENST00000348495 H2AFB2P0C5Z0 115 aa22.05■■□□□ 1.12
SSBP4-202ENST00000348495 PI3P19957 117 aa22.05■■□□□ 1.12
SSBP4-202ENST00000348495 COX7A1P24310 79 aa22.05■■□□□ 1.12
SSBP4-202ENST00000348495 MECP2P51608 486 aaKnown RBP22.05■■□□□ 1.12
SSBP4-202ENST00000348495 CYB5R2Q6BCY4 276 aa22.05■■□□□ 1.12
SSBP4-202ENST00000348495 PNKDQ8N490 385 aa22.05■■□□□ 1.12
SSBP4-202ENST00000348495 BEND2Q8NDZ0 799 aa22.05■■□□□ 1.12
SSBP4-202ENST00000348495 MAST4O15021 2626 aa22.05■■□□□ 1.12
SSBP4-202ENST00000348495 MSMO1Q15800 293 aa22.04■■□□□ 1.12
SSBP4-202ENST00000348495 NCR3LG1Q68D85 454 aa22.04■■□□□ 1.12
SSBP4-202ENST00000348495 ZNF645Q8N7E2 425 aa22.04■■□□□ 1.12
SSBP4-202ENST00000348495 BVESQ8NE79 360 aa22.04■■□□□ 1.12
SSBP4-202ENST00000348495 C5orf30Q96GV9 206 aa22.04■■□□□ 1.12
SSBP4-202ENST00000348495 ZNF486Q96H40 463 aaPredicted RBP22.04■■□□□ 1.12
SSBP4-202ENST00000348495 GAB2Q9UQC2 676 aa22.04■■□□□ 1.12
SSBP4-202ENST00000348495 RLN1P04808 185 aa22.03■■□□□ 1.12
SSBP4-202ENST00000348495 KLRD1Q13241 179 aa22.03■■□□□ 1.12
SSBP4-202ENST00000348495 DRAM1Q8N682 238 aa22.03■■□□□ 1.12
SSBP4-202ENST00000348495 AUP1Q9Y679 476 aa22.03■■□□□ 1.12
SSBP4-202ENST00000348495 J3QLI3 93 aa22.03■■□□□ 1.12
SSBP4-202ENST00000348495 HSD17B6O14756 317 aa22.03■■□□□ 1.12
SSBP4-202ENST00000348495 SMAD7O15105 426 aaKnown RBP22.03■■□□□ 1.12
SSBP4-202ENST00000348495 SLC22A5O76082 557 aa22.03■■□□□ 1.12
SSBP4-202ENST00000348495 RAG2P55895 527 aa22.03■■□□□ 1.12
SSBP4-202ENST00000348495 ZNF626Q68DY1 528 aa22.03■■□□□ 1.12
SSBP4-202ENST00000348495 AKR1E2Q96JD6 320 aa22.03■■□□□ 1.12
SSBP4-202ENST00000348495 GHITMQ9H3K2 345 aa22.03■■□□□ 1.12
SSBP4-202ENST00000348495 C7orf69Q9H7B7 122 aa22.03■■□□□ 1.12
SSBP4-202ENST00000348495 KCNS2Q9ULS6 477 aa22.03■■□□□ 1.12
SSBP4-202ENST00000348495 OTOGQ6ZRI0 2925 aa22.02■■□□□ 1.12
SSBP4-202ENST00000348495 ODF3BA8MYP8 253 aa22.02■■□□□ 1.12
SSBP4-202ENST00000348495 INMT-MINDY4F8WBC2 141 aa22.02■■□□□ 1.12
SSBP4-202ENST00000348495 GPR31O00270 319 aa22.02■■□□□ 1.12
SSBP4-202ENST00000348495 TOR1AO14656 332 aa22.02■■□□□ 1.12
SSBP4-202ENST00000348495 PROP1O75360 226 aa22.02■■□□□ 1.12
SSBP4-202ENST00000348495 ZNF16P17020 682 aaPredicted RBP22.02■■□□□ 1.12
SSBP4-202ENST00000348495 PRRX1P54821 245 aa22.02■■□□□ 1.12
SSBP4-202ENST00000348495 HLA-DRB5Q30154 266 aa22.02■■□□□ 1.12
SSBP4-202ENST00000348495 TMED4Q7Z7H5 227 aa22.02■■□□□ 1.12
SSBP4-202ENST00000348495 ADAD2Q8NCV1 583 aaKnown RBP22.02■■□□□ 1.12
SSBP4-202ENST00000348495 TMEM230Q96A57 120 aa22.02■■□□□ 1.12
SSBP4-202ENST00000348495 ZNF251Q9BRH9 671 aa22.02■■□□□ 1.12
SSBP4-202ENST00000348495 SLC2A9Q9NRM0 540 aa22.02■■□□□ 1.12
SSBP4-202ENST00000348495 SDHAF2Q9NX18 166 aa22.02■■□□□ 1.12
SSBP4-202ENST00000348495 C14orf166Q9Y224 244 aaKnown RBP22.02■■□□□ 1.12
SSBP4-202ENST00000348495 ABCA1O95477 2261 aa22.01■■□□□ 1.11
SSBP4-202ENST00000348495 PEX14O75381 377 aa22.01■■□□□ 1.11
SSBP4-202ENST00000348495 GPR12P47775 334 aa22.01■■□□□ 1.11
SSBP4-202ENST00000348495 EIF4EBP1Q13541 118 aaPredicted RBP22.01■■□□□ 1.11
SSBP4-202ENST00000348495 FAHD2BQ6P2I3 314 aaPredicted RBP22.01■■□□□ 1.11
SSBP4-202ENST00000348495 C1orf229Q6ZS94 237 aaPredicted RBP22.01■■□□□ 1.11
SSBP4-202ENST00000348495 SLC25A42Q86VD7 318 aa22.01■■□□□ 1.11
SSBP4-202ENST00000348495 LYG1Q8N1E2 194 aa22.01■■□□□ 1.11
SSBP4-202ENST00000348495 OR4P4Q8NGL7 312 aa22.01■■□□□ 1.11
SSBP4-202ENST00000348495 FAHD2AQ96GK7 314 aa22.01■■□□□ 1.11
SSBP4-202ENST00000348495 PIPOXQ9P0Z9 390 aa22.01■■□□□ 1.11
SSBP4-202ENST00000348495 ZNF221Q9UK13 617 aa22.01■■□□□ 1.11
SSBP4-202ENST00000348495 SAA2-SAA4A0A096LPE2 208 aa22■■□□□ 1.11
SSBP4-202ENST00000348495 RAB29O14966 203 aa22■■□□□ 1.11
SSBP4-202ENST00000348495 SAA2P0DJI9 122 aaPredicted RBP22■■□□□ 1.11
SSBP4-202ENST00000348495 ANXA7P20073 488 aaKnown RBP22■■□□□ 1.11
SSBP4-202ENST00000348495 ZNF137PP52743 207 aa22■■□□□ 1.11
SSBP4-202ENST00000348495 PIGPP57054 158 aa22■■□□□ 1.11
SSBP4-202ENST00000348495 PHLDA2Q53GA4 152 aa22■■□□□ 1.11
SSBP4-202ENST00000348495 ZNF436-AS1Q8NC38 126 aaPredicted RBP22■■□□□ 1.11
SSBP4-202ENST00000348495 ZBTB34Q8NCN2 500 aa22■■□□□ 1.11
SSBP4-202ENST00000348495 ALX4Q9H161 411 aaPredicted RBP22■■□□□ 1.11
SSBP4-202ENST00000348495 UBE2E1P51965 193 aa22■■□□□ 1.11
SSBP4-202ENST00000348495 RAB25P57735 213 aa22■■□□□ 1.11
SSBP4-202ENST00000348495 RND3P61587 244 aa22■■□□□ 1.11
SSBP4-202ENST00000348495 OR10X1Q8NGY0 326 aa22■■□□□ 1.11
SSBP4-202ENST00000348495 LHX4Q969G2 390 aa22■■□□□ 1.11
SSBP4-202ENST00000348495 ST6GALNAC6Q969X2 333 aa22■■□□□ 1.11
SSBP4-202ENST00000348495 ZNF469Q96JG9 3925 aaPredicted RBP21.99■■□□□ 1.11
SSBP4-202ENST00000348495 AVPP01185 164 aa21.99■■□□□ 1.11
SSBP4-202ENST00000348495 VSIG10L2P0DP72 767 aa21.99■■□□□ 1.11
SSBP4-202ENST00000348495 DHODHQ02127 395 aa21.99■■□□□ 1.11
SSBP4-202ENST00000348495 ABCA11PQ4W5N1 156 aa21.99■■□□□ 1.11
SSBP4-202ENST00000348495 RPL39P5Q59GN2 51 aa21.99■■□□□ 1.11
SSBP4-202ENST00000348495 CMTM1Q8IZ96 169 aa21.99■■□□□ 1.11
SSBP4-202ENST00000348495 BUB1B-PAK6H3BSN5 160 aa21.98■■□□□ 1.11
SSBP4-202ENST00000348495 KRTAP1-1Q07627 177 aa21.98■■□□□ 1.11
SSBP4-202ENST00000348495 Q6ZNX1 250 aa21.98■■□□□ 1.11
SSBP4-202ENST00000348495 ZNF833PQ6ZTB9 187 aa21.98■■□□□ 1.11
SSBP4-202ENST00000348495 PDZD9Q8IXQ8 264 aa21.98■■□□□ 1.11
SSBP4-202ENST00000348495 CAPSLQ8WWF8 208 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms