RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 FAM90A5PA8MXJ8 464 aa16.78■□□□□ 0.28
CRLF3-201ENST00000324238 FAM90A23PA8MXZ1 464 aa16.78■□□□□ 0.28
CRLF3-201ENST00000324238 FAM90A15PP0C7V4 464 aa16.78■□□□□ 0.28
CRLF3-201ENST00000324238 FAM90A13PP0C7W8 464 aa16.78■□□□□ 0.28
CRLF3-201ENST00000324238 FAM90A14PP0C7W9 464 aa16.78■□□□□ 0.28
CRLF3-201ENST00000324238 FAM90A24PP0C7X0 464 aa16.78■□□□□ 0.28
CRLF3-201ENST00000324238 GNG3P63215 75 aa16.78■□□□□ 0.28
CRLF3-201ENST00000324238 PRDM13Q9H4Q3 707 aa16.78■□□□□ 0.28
CRLF3-201ENST00000324238 DMRT1Q9Y5R6 373 aa16.78■□□□□ 0.28
CRLF3-201ENST00000324238 ROS1P08922 2347 aa16.78■□□□□ 0.28
CRLF3-201ENST00000324238 PCNX2A6NKB5 2137 aa16.78■□□□□ 0.28
CRLF3-201ENST00000324238 LNP1A1A4G5 178 aa16.77■□□□□ 0.28
CRLF3-201ENST00000324238 YKT6O15498 198 aa16.77■□□□□ 0.28
CRLF3-201ENST00000324238 EGR1P18146 543 aa16.77■□□□□ 0.28
CRLF3-201ENST00000324238 C1orf87Q8N0U7 546 aa16.77■□□□□ 0.28
CRLF3-201ENST00000324238 RIF1Q5UIP0 2472 aaKnown RBP16.77■□□□□ 0.28
CRLF3-201ENST00000324238 SEC14L6B5MCN3 397 aa16.77■□□□□ 0.28
CRLF3-201ENST00000324238 CLDN34H7C241 214 aa16.77■□□□□ 0.28
CRLF3-201ENST00000324238 ZNF737O75373 536 aa16.77■□□□□ 0.28
CRLF3-201ENST00000324238 GPX4P36969 197 aaPredicted RBP16.77■□□□□ 0.28
CRLF3-201ENST00000324238 MPLP40238 635 aa16.77■□□□□ 0.28
CRLF3-201ENST00000324238 ZNF826PQ6ZT77 177 aa16.77■□□□□ 0.28
CRLF3-201ENST00000324238 MDP1Q86V88 176 aa16.77■□□□□ 0.28
CRLF3-201ENST00000324238 FGFRL1Q8N441 504 aa16.77■□□□□ 0.28
CRLF3-201ENST00000324238 DRAM1Q8N682 238 aa16.77■□□□□ 0.28
CRLF3-201ENST00000324238 WFIKKN1Q96NZ8 548 aa16.77■□□□□ 0.28
CRLF3-201ENST00000324238 SMIM7Q9BQ49 75 aa16.77■□□□□ 0.28
CRLF3-201ENST00000324238 WISP2O76076 250 aa16.77■□□□□ 0.27
CRLF3-201ENST00000324238 CYC1P08574 325 aa16.77■□□□□ 0.27
CRLF3-201ENST00000324238 APLNRP35414 380 aa16.77■□□□□ 0.27
CRLF3-201ENST00000324238 OR8G5Q8NG78 346 aa16.77■□□□□ 0.27
CRLF3-201ENST00000324238 OR1L1Q8NH94 360 aa16.77■□□□□ 0.27
CRLF3-201ENST00000324238 ZDHHC16Q969W1 377 aa16.77■□□□□ 0.27
CRLF3-201ENST00000324238 WDYHV1Q96HA8 205 aa16.77■□□□□ 0.27
CRLF3-201ENST00000324238 FAM173AQ9BQD7 235 aa16.77■□□□□ 0.27
CRLF3-201ENST00000324238 SDF2L1Q9HCN8 221 aa16.77■□□□□ 0.27
CRLF3-201ENST00000324238 SLC39A9Q9NUM3 307 aa16.77■□□□□ 0.27
CRLF3-201ENST00000324238 WNT9BO14905 357 aa16.76■□□□□ 0.27
CRLF3-201ENST00000324238 LTC4SQ16873 150 aa16.76■□□□□ 0.27
CRLF3-201ENST00000324238 DCAF10Q5QP82 559 aa16.76■□□□□ 0.27
CRLF3-201ENST00000324238 ZNF573Q86YE8 665 aa16.76■□□□□ 0.27
CRLF3-201ENST00000324238 OR2J1Q9GZK6 312 aa16.76■□□□□ 0.27
CRLF3-201ENST00000324238 IFNL4K9M1U5 179 aa16.76■□□□□ 0.27
CRLF3-201ENST00000324238 SLC38A11Q08AI6 406 aa16.76■□□□□ 0.27
CRLF3-201ENST00000324238 Q6P435 159 aa16.76■□□□□ 0.27
CRLF3-201ENST00000324238 ACSM6Q6P461 480 aa16.76■□□□□ 0.27
CRLF3-201ENST00000324238 MEGF10Q96KG7 1140 aa16.76■□□□□ 0.27
CRLF3-201ENST00000324238 CISD1Q9NZ45 108 aaKnown RBP16.76■□□□□ 0.27
CRLF3-201ENST00000324238 DMXL2Q8TDJ6 3036 aa16.75■□□□□ 0.27
CRLF3-201ENST00000324238 IGHV3-43A0A0B4J1X8 118 aa16.75■□□□□ 0.27
CRLF3-201ENST00000324238 DUXBA0A1W2PPF3 345 aa16.75■□□□□ 0.27
CRLF3-201ENST00000324238 OR5H1A6NKK0 313 aa16.75■□□□□ 0.27
CRLF3-201ENST00000324238 DEFB108AA8MXU0 73 aa16.75■□□□□ 0.27
CRLF3-201ENST00000324238 SOX15O60248 233 aa16.75■□□□□ 0.27
CRLF3-201ENST00000324238 RBMXL2O75526 392 aaKnown RBP16.75■□□□□ 0.27
CRLF3-201ENST00000324238 IGHV3-43DP0DP04 118 aa16.75■□□□□ 0.27
CRLF3-201ENST00000324238 DEFA6Q01524 100 aa16.75■□□□□ 0.27
CRLF3-201ENST00000324238 TMEM45BQ96B21 275 aa16.75■□□□□ 0.27
CRLF3-201ENST00000324238 ABHD14BQ96IU4 210 aa16.75■□□□□ 0.27
CRLF3-201ENST00000324238 OR51I2Q9H344 312 aa16.75■□□□□ 0.27
CRLF3-201ENST00000324238 ZNF729A6NN14 1252 aaPredicted RBP16.75■□□□□ 0.27
CRLF3-201ENST00000324238 B4E171 279 aa16.75■□□□□ 0.27
CRLF3-201ENST00000324238 NXPH2O95156 264 aa16.75■□□□□ 0.27
CRLF3-201ENST00000324238 IGHV3-13P01766 116 aa16.75■□□□□ 0.27
CRLF3-201ENST00000324238 IGHV3-7P01780 117 aa16.75■□□□□ 0.27
CRLF3-201ENST00000324238 TSPAN7P41732 249 aa16.75■□□□□ 0.27
CRLF3-201ENST00000324238 CD81P60033 236 aa16.75■□□□□ 0.27
CRLF3-201ENST00000324238 RPL30P62888 115 aaKnown RBP16.75■□□□□ 0.27
CRLF3-201ENST00000324238 C16orf82Q7Z2V1 217 aa16.75■□□□□ 0.27
CRLF3-201ENST00000324238 LURAP1LQ8IV03 231 aa16.75■□□□□ 0.27
CRLF3-201ENST00000324238 SAXO1Q8IYX7 474 aa16.75■□□□□ 0.27
CRLF3-201ENST00000324238 SCCPDHQ8NBX0 429 aa16.75■□□□□ 0.27
CRLF3-201ENST00000324238 OR52L2PQ8NGH6 319 aa16.75■□□□□ 0.27
CRLF3-201ENST00000324238 RFESDQ8TAC1 157 aa16.75■□□□□ 0.27
CRLF3-201ENST00000324238 STRADBQ9C0K7 418 aa16.75■□□□□ 0.27
CRLF3-201ENST00000324238 SIRT7Q9NRC8 400 aa16.75■□□□□ 0.27
CRLF3-201ENST00000324238 TREM2Q9NZC2 230 aa16.75■□□□□ 0.27
CRLF3-201ENST00000324238 LAMP3Q9UQV4 416 aa16.75■□□□□ 0.27
CRLF3-201ENST00000324238 IDH3GP51553 393 aaPredicted RBP16.74■□□□□ 0.27
CRLF3-201ENST00000324238 LRRC75BQ2VPJ9 315 aa16.74■□□□□ 0.27
CRLF3-201ENST00000324238 SNIP1Q8TAD8 396 aaKnown RBP16.74■□□□□ 0.27
CRLF3-201ENST00000324238 WDR61Q9GZS3 305 aaKnown RBP16.74■□□□□ 0.27
CRLF3-201ENST00000324238 B4GALT7Q9UBV7 327 aa16.74■□□□□ 0.27
CRLF3-201ENST00000324238 FZR1Q9UM11 496 aa16.74■□□□□ 0.27
CRLF3-201ENST00000324238 IGKV3D-15A0A087WSY6 115 aa16.74■□□□□ 0.27
CRLF3-201ENST00000324238 IL18BPO95998 194 aa16.74■□□□□ 0.27
CRLF3-201ENST00000324238 CYB5R3P00387 301 aaPredicted RBP16.74■□□□□ 0.27
CRLF3-201ENST00000324238 IGHEP01854 428 aa16.74■□□□□ 0.27
CRLF3-201ENST00000324238 TAF15Q92804 592 aaKnown RBP eCLIP16.74■□□□□ 0.27
CRLF3-201ENST00000324238 PACRGQ96M98 296 aaPredicted RBP16.74■□□□□ 0.27
CRLF3-201ENST00000324238 GZMHP20718 246 aa16.74■□□□□ 0.27
CRLF3-201ENST00000324238 OR3A1P47881 315 aa16.74■□□□□ 0.27
CRLF3-201ENST00000324238 TFF3Q07654 80 aa16.74■□□□□ 0.27
CRLF3-201ENST00000324238 OR8G1Q15617 311 aa16.74■□□□□ 0.27
CRLF3-201ENST00000324238 OR4X1Q8NH49 305 aa16.74■□□□□ 0.27
CRLF3-201ENST00000324238 IL22RA2Q969J5 263 aa16.74■□□□□ 0.27
CRLF3-201ENST00000324238 TMEM9BQ9NQ34 198 aa16.74■□□□□ 0.27
CRLF3-201ENST00000324238 PSPNO60542 156 aa16.73■□□□□ 0.27
CRLF3-201ENST00000324238 MEOX1P50221 254 aa16.73■□□□□ 0.27
CRLF3-201ENST00000324238 OR2D2Q9H210 308 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms