RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 DAZAP2Q15038 168 aaPredicted RBP12.47□□□□□ -0.41
COL6A2-201ENST00000300527 GCSAMLQ5JQS6 135 aa12.47□□□□□ -0.41
COL6A2-201ENST00000300527 ABHD3Q8WU67 409 aa12.47□□□□□ -0.41
COL6A2-201ENST00000300527 TRAPPC2LQ9UL33 140 aa12.47□□□□□ -0.41
COL6A2-201ENST00000300527 MARCH11A6NNE9 402 aa12.46□□□□□ -0.41
COL6A2-201ENST00000300527 OR10J1P30954 320 aa12.46□□□□□ -0.41
COL6A2-201ENST00000300527 HOXA6P31267 233 aa12.46□□□□□ -0.41
COL6A2-201ENST00000300527 ABLIM2Q6H8Q1 611 aa12.46□□□□□ -0.41
COL6A2-201ENST00000300527 ZNF784Q8NCA9 323 aaPredicted RBP12.46□□□□□ -0.41
COL6A2-201ENST00000300527 HSPB9Q9BQS6 159 aa12.46□□□□□ -0.41
COL6A2-201ENST00000300527 TRAV38-1A0A0B4J264 116 aa12.46□□□□□ -0.41
COL6A2-201ENST00000300527 DLEU1O43261 78 aa12.46□□□□□ -0.41
COL6A2-201ENST00000300527 PAX1P15863 534 aa12.46□□□□□ -0.41
COL6A2-201ENST00000300527 G6PCP35575 357 aa12.46□□□□□ -0.41
COL6A2-201ENST00000300527 ATP5G3P48201 142 aa12.46□□□□□ -0.41
COL6A2-201ENST00000300527 TNFSF10P50591 281 aa12.46□□□□□ -0.41
COL6A2-201ENST00000300527 SPATA46Q5T0L3 261 aa12.46□□□□□ -0.41
COL6A2-201ENST00000300527 TGIF2LYQ8IUE0 185 aa12.46□□□□□ -0.41
COL6A2-201ENST00000300527 SLC25A45Q8N413 288 aa12.46□□□□□ -0.41
COL6A2-201ENST00000300527 CPEB3Q8NE35 698 aaKnown RBP12.46□□□□□ -0.41
COL6A2-201ENST00000300527 DUXBA0A1W2PPF3 345 aa12.46□□□□□ -0.42
COL6A2-201ENST00000300527 OR6C6A6NF89 314 aa12.46□□□□□ -0.42
COL6A2-201ENST00000300527 ZIC3O60481 467 aa12.46□□□□□ -0.42
COL6A2-201ENST00000300527 GLB1P16278 677 aa12.46□□□□□ -0.42
COL6A2-201ENST00000300527 CBLN1P23435 193 aa12.46□□□□□ -0.42
COL6A2-201ENST00000300527 EDDM3BP56851 147 aa12.46□□□□□ -0.42
COL6A2-201ENST00000300527 KRTDAPP60985 99 aa12.46□□□□□ -0.42
COL6A2-201ENST00000300527 C1orf194Q5T5A4 169 aa12.46□□□□□ -0.42
COL6A2-201ENST00000300527 ASCL4Q6XD76 172 aa12.46□□□□□ -0.42
COL6A2-201ENST00000300527 BAGE3Q86Y29 109 aa12.46□□□□□ -0.42
COL6A2-201ENST00000300527 BAGE2Q86Y30 109 aa12.46□□□□□ -0.42
COL6A2-201ENST00000300527 RYDENQ9NUL5 291 aaKnown RBP12.46□□□□□ -0.42
COL6A2-201ENST00000300527 FREM1Q5H8C1 2179 aa12.46□□□□□ -0.42
COL6A2-201ENST00000300527 ETV2O00321 342 aaPredicted RBP12.45□□□□□ -0.42
COL6A2-201ENST00000300527 CLDN15P56746 228 aa12.45□□□□□ -0.42
COL6A2-201ENST00000300527 FAM53AQ6NSI3 398 aaPredicted RBP12.45□□□□□ -0.42
COL6A2-201ENST00000300527 PSMG3Q9BT73 122 aaPredicted RBP12.45□□□□□ -0.42
COL6A2-201ENST00000300527 C19orf25Q9UFG5 118 aaPredicted RBP12.45□□□□□ -0.42
COL6A2-201ENST00000300527 TMEM42Q69YG0 159 aa12.45□□□□□ -0.42
COL6A2-201ENST00000300527 OR5P3Q8WZ94 311 aa12.45□□□□□ -0.42
COL6A2-201ENST00000300527 ZDHHC16Q969W1 377 aa12.45□□□□□ -0.42
COL6A2-201ENST00000300527 ZNF552Q9H707 407 aaPredicted RBP12.45□□□□□ -0.42
COL6A2-201ENST00000300527 NGFP01138 241 aa12.45□□□□□ -0.42
COL6A2-201ENST00000300527 FGF12P61328 243 aa12.45□□□□□ -0.42
COL6A2-201ENST00000300527 WIPI1Q5MNZ9 446 aaPredicted RBP12.45□□□□□ -0.42
COL6A2-201ENST00000300527 CISD2Q8N5K1 135 aaKnown RBP12.45□□□□□ -0.42
COL6A2-201ENST00000300527 FADS6Q8N9I5 356 aa12.45□□□□□ -0.42
COL6A2-201ENST00000300527 PLPPR2Q96GM1 343 aa12.45□□□□□ -0.42
COL6A2-201ENST00000300527 FGF23Q9GZV9 251 aaPredicted RBP12.45□□□□□ -0.42
COL6A2-201ENST00000300527 A0A0G2JMM0 328 aa12.44□□□□□ -0.42
COL6A2-201ENST00000300527 CTXND1A0A1B0GTU2 59 aa12.44□□□□□ -0.42
COL6A2-201ENST00000300527 A0A1W2PPB8 328 aa12.44□□□□□ -0.42
COL6A2-201ENST00000300527 A0A1W2PRS3 328 aa12.44□□□□□ -0.42
COL6A2-201ENST00000300527 KIR3DP1A8MWS1 328 aa12.44□□□□□ -0.42
COL6A2-201ENST00000300527 SFTPCP11686 197 aa12.44□□□□□ -0.42
COL6A2-201ENST00000300527 LIFP15018 202 aa12.44□□□□□ -0.42
COL6A2-201ENST00000300527 ADMP35318 185 aa12.44□□□□□ -0.42
COL6A2-201ENST00000300527 CDKN1AP38936 164 aa12.44□□□□□ -0.42
COL6A2-201ENST00000300527 PCSK4Q6UW60 755 aa12.44□□□□□ -0.42
COL6A2-201ENST00000300527 ZNF114Q8NC26 417 aa12.44□□□□□ -0.42
COL6A2-201ENST00000300527 DTD1Q8TEA8 209 aa12.44□□□□□ -0.42
COL6A2-201ENST00000300527 DNASE2BQ8WZ79 361 aa12.44□□□□□ -0.42
COL6A2-201ENST00000300527 PYGO2Q9BRQ0 406 aa12.44□□□□□ -0.42
COL6A2-201ENST00000300527 TMEM9BQ9NQ34 198 aa12.44□□□□□ -0.42
COL6A2-201ENST00000300527 CBY1Q9Y3M2 126 aa12.44□□□□□ -0.42
COL6A2-201ENST00000300527 KNTC1P50748 2209 aa12.44□□□□□ -0.42
COL6A2-201ENST00000300527 FREM2Q5SZK8 3169 aa12.44□□□□□ -0.42
COL6A2-201ENST00000300527 MDFIC2A0A1B0GVS7 189 aa12.44□□□□□ -0.42
COL6A2-201ENST00000300527 C2CD4DB7Z1M9 353 aa12.44□□□□□ -0.42
COL6A2-201ENST00000300527 CTXN2P0C2S0 81 aa12.44□□□□□ -0.42
COL6A2-201ENST00000300527 ANAPC16Q96DE5 110 aa12.44□□□□□ -0.42
COL6A2-201ENST00000300527 VAMP8Q9BV40 100 aa12.44□□□□□ -0.42
COL6A2-201ENST00000300527 CHRNA10Q9GZZ6 450 aa12.44□□□□□ -0.42
COL6A2-201ENST00000300527 OPN3Q9H1Y3 402 aaPredicted RBP12.44□□□□□ -0.42
COL6A2-201ENST00000300527 CEACAM6P40199 344 aa12.43□□□□□ -0.42
COL6A2-201ENST00000300527 GUSBP11Q6P575 273 aa12.43□□□□□ -0.42
COL6A2-201ENST00000300527 RABEPKQ7Z6M1 372 aa12.43□□□□□ -0.42
COL6A2-201ENST00000300527 C17orf82Q86X59 251 aaPredicted RBP12.43□□□□□ -0.42
COL6A2-201ENST00000300527 FGFRL1Q8N441 504 aa12.43□□□□□ -0.42
COL6A2-201ENST00000300527 IL36GQ9NZH8 169 aa12.43□□□□□ -0.42
COL6A2-201ENST00000300527 AHCTF1Q8WYP5 2266 aa12.43□□□□□ -0.42
COL6A2-201ENST00000300527 DEGS1O15121 323 aa12.43□□□□□ -0.42
COL6A2-201ENST00000300527 RAB4AP20338 218 aa12.43□□□□□ -0.42
COL6A2-201ENST00000300527 COX5AP20674 150 aa12.43□□□□□ -0.42
COL6A2-201ENST00000300527 KITLGP21583 273 aa12.43□□□□□ -0.42
COL6A2-201ENST00000300527 NPPCP23582 126 aa12.43□□□□□ -0.42
COL6A2-201ENST00000300527 DSCR4P56555 118 aaPredicted RBP12.43□□□□□ -0.42
COL6A2-201ENST00000300527 NXPH1P58417 271 aa12.43□□□□□ -0.42
COL6A2-201ENST00000300527 ZNF90Q03938 601 aa12.43□□□□□ -0.42
COL6A2-201ENST00000300527 COA6Q5JTJ3 125 aaKnown RBP12.43□□□□□ -0.42
COL6A2-201ENST00000300527 BTF3L4Q96K17 158 aa12.43□□□□□ -0.42
COL6A2-201ENST00000300527 USF3Q68DE3 2245 aa12.43□□□□□ -0.42
COL6A2-201ENST00000300527 IGLV3-32A0A0A0MS00 114 aa12.43□□□□□ -0.42
COL6A2-201ENST00000300527 ZNF324BQ6AW86 544 aaPredicted RBP12.43□□□□□ -0.42
COL6A2-201ENST00000300527 ZCCHC14Q8WYQ9 949 aaKnown RBP12.43□□□□□ -0.42
COL6A2-201ENST00000300527 SLC17A3O00476 420 aa12.42□□□□□ -0.42
COL6A2-201ENST00000300527 ZG16O60844 167 aa12.42□□□□□ -0.42
COL6A2-201ENST00000300527 RHBDL1O75783 438 aa12.42□□□□□ -0.42
COL6A2-201ENST00000300527 COL8A2P25067 703 aa12.42□□□□□ -0.42
COL6A2-201ENST00000300527 LINC00205P59089 165 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms