RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 BOKQ9UMX3 212 aaPredicted RBP11.34□□□□□ -0.59
TNFRSF21-201ENST00000296861 KLF7O75840 302 aaPredicted RBP11.33□□□□□ -0.6
TNFRSF21-201ENST00000296861 P2RY6Q15077 328 aa11.33□□□□□ -0.6
TNFRSF21-201ENST00000296861 TMEM41BQ5BJD5 291 aa11.33□□□□□ -0.6
TNFRSF21-201ENST00000296861 DCAF12Q5T6F0 453 aa11.33□□□□□ -0.6
TNFRSF21-201ENST00000296861 MRPL14Q6P1L8 145 aaKnown RBP11.33□□□□□ -0.6
TNFRSF21-201ENST00000296861 OR10A7Q8NGE5 316 aa11.33□□□□□ -0.6
TNFRSF21-201ENST00000296861 OR52L2PQ8NGH6 319 aa11.33□□□□□ -0.6
TNFRSF21-201ENST00000296861 APOBEC3DQ96AK3 386 aaPredicted RBP11.33□□□□□ -0.6
TNFRSF21-201ENST00000296861 SCRT1Q9BWW7 348 aa11.33□□□□□ -0.6
TNFRSF21-201ENST00000296861 DLL3Q9NYJ7 618 aa11.33□□□□□ -0.6
TNFRSF21-201ENST00000296861 B4GALT7Q9UBV7 327 aa11.33□□□□□ -0.6
TNFRSF21-201ENST00000296861 ATP23Q9Y6H3 246 aa11.33□□□□□ -0.6
TNFRSF21-201ENST00000296861 TRAV38-1A0A0B4J264 116 aa11.33□□□□□ -0.6
TNFRSF21-201ENST00000296861 HSPB1P04792 205 aaKnown RBP11.33□□□□□ -0.6
TNFRSF21-201ENST00000296861 OTX1P32242 354 aaPredicted RBP11.33□□□□□ -0.6
TNFRSF21-201ENST00000296861 RPL29P47914 159 aaKnown RBP11.33□□□□□ -0.6
TNFRSF21-201ENST00000296861 FGF12P61328 243 aa11.33□□□□□ -0.6
TNFRSF21-201ENST00000296861 GCSAMLQ5JQS6 135 aa11.33□□□□□ -0.6
TNFRSF21-201ENST00000296861 SSX7Q7RTT5 188 aa11.33□□□□□ -0.6
TNFRSF21-201ENST00000296861 REC114Q7Z4M0 266 aa11.33□□□□□ -0.6
TNFRSF21-201ENST00000296861 TGIF2LXQ8IUE1 241 aa11.33□□□□□ -0.6
TNFRSF21-201ENST00000296861 KDF1Q8NAX2 398 aaPredicted RBP11.33□□□□□ -0.6
TNFRSF21-201ENST00000296861 SSC4DQ8WTU2 575 aa11.33□□□□□ -0.6
TNFRSF21-201ENST00000296861 OR2J1Q9GZK6 312 aa11.33□□□□□ -0.6
TNFRSF21-201ENST00000296861 PROK2Q9HC23 129 aa11.33□□□□□ -0.6
TNFRSF21-201ENST00000296861 TAAR3PQ9P1P4 343 aa11.33□□□□□ -0.6
TNFRSF21-201ENST00000296861 GNG12Q9UBI6 72 aa11.33□□□□□ -0.6
TNFRSF21-201ENST00000296861 WNT9BO14905 357 aa11.33□□□□□ -0.6
TNFRSF21-201ENST00000296861 TCAPO15273 167 aa11.33□□□□□ -0.6
TNFRSF21-201ENST00000296861 CTSSP25774 331 aa11.33□□□□□ -0.6
TNFRSF21-201ENST00000296861 C1QL4Q86Z23 238 aa11.33□□□□□ -0.6
TNFRSF21-201ENST00000296861 VKORC1L1Q8N0U8 176 aa11.33□□□□□ -0.6
TNFRSF21-201ENST00000296861 OR1L1Q8NH94 360 aa11.33□□□□□ -0.6
TNFRSF21-201ENST00000296861 SAP25Q8TEE9 199 aa11.33□□□□□ -0.6
TNFRSF21-201ENST00000296861 FAM103A1Q9BTL3 118 aaKnown RBP11.33□□□□□ -0.6
TNFRSF21-201ENST00000296861 OR51I2Q9H344 312 aa11.33□□□□□ -0.6
TNFRSF21-201ENST00000296861 HEYLQ9NQ87 328 aaPredicted RBP11.33□□□□□ -0.6
TNFRSF21-201ENST00000296861 ZNF716A6NP11 495 aa11.32□□□□□ -0.6
TNFRSF21-201ENST00000296861 GNG3P63215 75 aa11.32□□□□□ -0.6
TNFRSF21-201ENST00000296861 SLC35B1P78383 322 aa11.32□□□□□ -0.6
TNFRSF21-201ENST00000296861 COL10A1Q03692 680 aa11.32□□□□□ -0.6
TNFRSF21-201ENST00000296861 FGFRL1Q8N441 504 aa11.32□□□□□ -0.6
TNFRSF21-201ENST00000296861 OR10P1Q8NGE3 313 aa11.32□□□□□ -0.6
TNFRSF21-201ENST00000296861 MISP3Q96FF7 219 aa11.32□□□□□ -0.6
TNFRSF21-201ENST00000296861 TCFL5Q9UL49 500 aa11.32□□□□□ -0.6
TNFRSF21-201ENST00000296861 APC2O95996 2303 aa11.32□□□□□ -0.6
TNFRSF21-201ENST00000296861 ELOA3CA0A087WX78 387 aaPredicted RBP11.32□□□□□ -0.6
TNFRSF21-201ENST00000296861 ZNF503-AS2A6NEH8 195 aa11.32□□□□□ -0.6
TNFRSF21-201ENST00000296861 RAMP3O60896 148 aa11.32□□□□□ -0.6
TNFRSF21-201ENST00000296861 ACTL6BO94805 426 aa11.32□□□□□ -0.6
TNFRSF21-201ENST00000296861 H2BFWTQ7Z2G1 175 aa11.32□□□□□ -0.6
TNFRSF21-201ENST00000296861 ZNF573Q86YE8 665 aa11.32□□□□□ -0.6
TNFRSF21-201ENST00000296861 DMRTC2Q8IXT2 367 aaPredicted RBP11.32□□□□□ -0.6
TNFRSF21-201ENST00000296861 SSMEM1Q8WWF3 244 aa11.32□□□□□ -0.6
TNFRSF21-201ENST00000296861 C10orf35Q96D05 121 aa11.32□□□□□ -0.6
TNFRSF21-201ENST00000296861 IMMP1LQ96LU5 166 aa11.32□□□□□ -0.6
TNFRSF21-201ENST00000296861 SIGLEC12Q96PQ1 595 aa11.32□□□□□ -0.6
TNFRSF21-201ENST00000296861 RAB40CQ96S21 281 aa11.32□□□□□ -0.6
TNFRSF21-201ENST00000296861 PRDM13Q9H4Q3 707 aa11.32□□□□□ -0.6
TNFRSF21-201ENST00000296861 SIRT7Q9NRC8 400 aa11.32□□□□□ -0.6
TNFRSF21-201ENST00000296861 PSG11Q9UQ72 335 aa11.32□□□□□ -0.6
TNFRSF21-201ENST00000296861 ZFHX4Q86UP3 3567 aa11.32□□□□□ -0.6
TNFRSF21-201ENST00000296861 LOC102723971A0A1B0GUV8 181 aa11.32□□□□□ -0.6
TNFRSF21-201ENST00000296861 GRIFINA4D1Z8 144 aa11.32□□□□□ -0.6
TNFRSF21-201ENST00000296861 C1QTNF9BB2RNN3 333 aa11.32□□□□□ -0.6
TNFRSF21-201ENST00000296861 ZG16O60844 167 aa11.32□□□□□ -0.6
TNFRSF21-201ENST00000296861 SLC25A6P12236 298 aa11.32□□□□□ -0.6
TNFRSF21-201ENST00000296861 PRSS8Q16651 343 aa11.32□□□□□ -0.6
TNFRSF21-201ENST00000296861 NUFIP2Q7Z417 695 aaKnown RBP11.32□□□□□ -0.6
TNFRSF21-201ENST00000296861 ARL6IP6Q8N6S5 226 aa11.32□□□□□ -0.6
TNFRSF21-201ENST00000296861 DCTN5Q9BTE1 182 aa11.32□□□□□ -0.6
TNFRSF21-201ENST00000296861 MT-CO3P00414 261 aa11.31□□□□□ -0.6
TNFRSF21-201ENST00000296861 CTXN2P0C2S0 81 aa11.31□□□□□ -0.6
TNFRSF21-201ENST00000296861 ID3Q02535 119 aa11.31□□□□□ -0.6
TNFRSF21-201ENST00000296861 OR8G1Q15617 311 aa11.31□□□□□ -0.6
TNFRSF21-201ENST00000296861 MAJINQ3KP22 176 aa11.31□□□□□ -0.6
TNFRSF21-201ENST00000296861 PDLIM3Q53GG5 364 aaPredicted RBP11.31□□□□□ -0.6
TNFRSF21-201ENST00000296861 ZNF506Q5JVG8 444 aa11.31□□□□□ -0.6
TNFRSF21-201ENST00000296861 M1APQ8TC57 530 aa11.31□□□□□ -0.6
TNFRSF21-201ENST00000296861 TNCP24821 2201 aa11.31□□□□□ -0.6
TNFRSF21-201ENST00000296861 AGFG2O95081 481 aa11.31□□□□□ -0.6
TNFRSF21-201ENST00000296861 CELA3BP08861 270 aa11.31□□□□□ -0.6
TNFRSF21-201ENST00000296861 UCP1P25874 307 aa11.31□□□□□ -0.6
TNFRSF21-201ENST00000296861 NUBP1P53384 320 aa11.31□□□□□ -0.6
TNFRSF21-201ENST00000296861 ATP1A1-AS1Q5TC04 95 aa11.31□□□□□ -0.6
TNFRSF21-201ENST00000296861 SLC35E3Q7Z769 313 aa11.31□□□□□ -0.6
TNFRSF21-201ENST00000296861 CARFQ8N187 725 aa11.31□□□□□ -0.6
TNFRSF21-201ENST00000296861 DNASE2BQ8WZ79 361 aa11.31□□□□□ -0.6
TNFRSF21-201ENST00000296861 HIST1H2BLQ99880 126 aa11.31□□□□□ -0.6
TNFRSF21-201ENST00000296861 SMDT1Q9H4I9 107 aa11.31□□□□□ -0.6
TNFRSF21-201ENST00000296861 VAX2Q9UIW0 290 aa11.31□□□□□ -0.6
TNFRSF21-201ENST00000296861 LOXL2Q9Y4K0 774 aa11.31□□□□□ -0.6
TNFRSF21-201ENST00000296861 SLC31A2O15432 143 aa11.31□□□□□ -0.6
TNFRSF21-201ENST00000296861 HOXC12P31275 282 aa11.31□□□□□ -0.6
TNFRSF21-201ENST00000296861 TFF3Q07654 80 aa11.31□□□□□ -0.6
TNFRSF21-201ENST00000296861 CEACAM21Q3KPI0 293 aa11.31□□□□□ -0.6
TNFRSF21-201ENST00000296861 PRR31Q5SQ13 230 aa11.31□□□□□ -0.6
TNFRSF21-201ENST00000296861 DEFB108BQ8NET1 73 aa11.31□□□□□ -0.6
TNFRSF21-201ENST00000296861 OR4X1Q8NH49 305 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms