RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 H0YIZ8 118 aa18.85■□□□□ 0.61
PTX3-201ENST00000295927 RGS13O14921 159 aa18.85■□□□□ 0.61
PTX3-201ENST00000295927 SERPINE2P07093 398 aa18.85■□□□□ 0.61
PTX3-201ENST00000295927 RPA2P15927 270 aa18.85■□□□□ 0.61
PTX3-201ENST00000295927 ZNF134P52741 427 aa18.85■□□□□ 0.61
PTX3-201ENST00000295927 TMEM200BQ69YZ2 307 aa18.85■□□□□ 0.61
PTX3-201ENST00000295927 LEAP2Q969E1 77 aa18.85■□□□□ 0.61
PTX3-201ENST00000295927 IL22RA2Q969J5 263 aa18.85■□□□□ 0.61
PTX3-201ENST00000295927 MFFQ9GZY8 342 aa18.85■□□□□ 0.61
PTX3-201ENST00000295927 SDHAF2Q9NX18 166 aa18.85■□□□□ 0.61
PTX3-201ENST00000295927 TNFSF18Q9UNG2 199 aa18.85■□□□□ 0.61
PTX3-201ENST00000295927 DUXBA0A1W2PPF3 345 aa18.84■□□□□ 0.61
PTX3-201ENST00000295927 RNF212BA8MTL3 300 aa18.84■□□□□ 0.61
PTX3-201ENST00000295927 MMP23AO75900 390 aa18.84■□□□□ 0.61
PTX3-201ENST00000295927 FAM216AQ8WUB2 273 aa18.84■□□□□ 0.61
PTX3-201ENST00000295927 PLEKHF2Q9H8W4 249 aa18.84■□□□□ 0.61
PTX3-201ENST00000295927 NFYBP25208 207 aa18.84■□□□□ 0.61
PTX3-201ENST00000295927 CDKN1AP38936 164 aa18.84■□□□□ 0.61
PTX3-201ENST00000295927 PRAMEF5Q5TYX0 476 aa18.84■□□□□ 0.61
PTX3-201ENST00000295927 BTNL3Q6UXE8 466 aa18.84■□□□□ 0.61
PTX3-201ENST00000295927 GAL3ST2Q9H3Q3 398 aa18.84■□□□□ 0.61
PTX3-201ENST00000295927 LPAR3Q9UBY5 353 aa18.84■□□□□ 0.61
PTX3-201ENST00000295927 USP9XQ93008 2570 aaPredicted RBP18.83■□□□□ 0.61
PTX3-201ENST00000295927 GPR12P47775 334 aa18.83■□□□□ 0.6
PTX3-201ENST00000295927 S100A10P60903 97 aa18.83■□□□□ 0.6
PTX3-201ENST00000295927 RPL30P62888 115 aaKnown RBP18.83■□□□□ 0.6
PTX3-201ENST00000295927 OPCMLQ14982 345 aa18.83■□□□□ 0.6
PTX3-201ENST00000295927 TMEM30BQ3MIR4 351 aa18.83■□□□□ 0.6
PTX3-201ENST00000295927 Q3ZCU0 254 aa18.83■□□□□ 0.6
PTX3-201ENST00000295927 ZNF585BQ52M93 769 aa18.83■□□□□ 0.6
PTX3-201ENST00000295927 TMUB2Q71RG4 321 aa18.83■□□□□ 0.6
PTX3-201ENST00000295927 OR52M1Q8NGK5 317 aa18.83■□□□□ 0.6
PTX3-201ENST00000295927 HEXA-AS1Q9H8Q6 139 aa18.83■□□□□ 0.6
PTX3-201ENST00000295927 KLF2Q9Y5W3 355 aaPredicted RBP18.83■□□□□ 0.6
PTX3-201ENST00000295927 ARID1AO14497 2285 aa18.83■□□□□ 0.6
PTX3-201ENST00000295927 ITGB1BP1O14713 200 aa18.82■□□□□ 0.6
PTX3-201ENST00000295927 SLC31A2O15432 143 aa18.82■□□□□ 0.6
PTX3-201ENST00000295927 CCL3L1P16619 93 aa18.82■□□□□ 0.6
PTX3-201ENST00000295927 S100A11P31949 105 aa18.82■□□□□ 0.6
PTX3-201ENST00000295927 AP2S1P53680 142 aaPredicted RBP18.82■□□□□ 0.6
PTX3-201ENST00000295927 PRSS54Q6PEW0 395 aa18.82■□□□□ 0.6
PTX3-201ENST00000295927 ZNF714Q96N38 554 aa18.82■□□□□ 0.6
PTX3-201ENST00000295927 IFI27L2Q9H2X8 130 aa18.82■□□□□ 0.6
PTX3-201ENST00000295927 OR5AC2Q9NZP5 309 aa18.82■□□□□ 0.6
PTX3-201ENST00000295927 RPUSD1Q9UJJ7 312 aaKnown RBP18.82■□□□□ 0.6
PTX3-201ENST00000295927 IGKV1-39P01597 117 aa18.82■□□□□ 0.6
PTX3-201ENST00000295927 IGKV1D-39P04432 117 aa18.82■□□□□ 0.6
PTX3-201ENST00000295927 LYL1P12980 280 aa18.82■□□□□ 0.6
PTX3-201ENST00000295927 C4BPBP20851 252 aa18.82■□□□□ 0.6
PTX3-201ENST00000295927 VDAC1P21796 283 aa18.82■□□□□ 0.6
PTX3-201ENST00000295927 DCUN1D4Q92564 292 aa18.82■□□□□ 0.6
PTX3-201ENST00000295927 ABHD14AQ9BUJ0 271 aa18.82■□□□□ 0.6
PTX3-201ENST00000295927 DOCK11Q5JSL3 2073 aa18.81■□□□□ 0.6
PTX3-201ENST00000295927 USF3Q68DE3 2245 aa18.81■□□□□ 0.6
PTX3-201ENST00000295927 PPIHO43447 177 aaKnown RBP18.81■□□□□ 0.6
PTX3-201ENST00000295927 GOSR1O95249 250 aa18.81■□□□□ 0.6
PTX3-201ENST00000295927 ERVFRD-1P60508 538 aa18.81■□□□□ 0.6
PTX3-201ENST00000295927 CATR1Q13166 79 aa18.81■□□□□ 0.6
PTX3-201ENST00000295927 NMSQ5H8A3 153 aa18.81■□□□□ 0.6
PTX3-201ENST00000295927 CT45A1Q5HYN5 189 aa18.81■□□□□ 0.6
PTX3-201ENST00000295927 ZNF841Q6ZN19 808 aa18.81■□□□□ 0.6
PTX3-201ENST00000295927 FOXRED2Q8IWF2 684 aa18.81■□□□□ 0.6
PTX3-201ENST00000295927 CT45A3Q8NHU0 189 aa18.81■□□□□ 0.6
PTX3-201ENST00000295927 RAB1CQ92928 201 aa18.81■□□□□ 0.6
PTX3-201ENST00000295927 TIMD4Q96H15 378 aa18.81■□□□□ 0.6
PTX3-201ENST00000295927 ARL6Q9H0F7 186 aa18.81■□□□□ 0.6
PTX3-201ENST00000295927 PAIP2BQ9ULR5 123 aaKnown RBP18.81■□□□□ 0.6
PTX3-201ENST00000295927 MYO18BQ8IUG5 2567 aa18.81■□□□□ 0.6
PTX3-201ENST00000295927 A0A1W2PPE3 182 aa18.8■□□□□ 0.6
PTX3-201ENST00000295927 RNF222A6NCQ9 220 aa18.8■□□□□ 0.6
PTX3-201ENST00000295927 PROP1O75360 226 aa18.8■□□□□ 0.6
PTX3-201ENST00000295927 CLDN1O95832 211 aa18.8■□□□□ 0.6
PTX3-201ENST00000295927 SCGB1D2O95969 90 aa18.8■□□□□ 0.6
PTX3-201ENST00000295927 PET100P0DJ07 73 aa18.8■□□□□ 0.6
PTX3-201ENST00000295927 RAB7AP51149 207 aa18.8■□□□□ 0.6
PTX3-201ENST00000295927 ZNF66Q6ZN08 573 aa18.8■□□□□ 0.6
PTX3-201ENST00000295927 ZNF439Q8NDP4 499 aa18.8■□□□□ 0.6
PTX3-201ENST00000295927 OR10A7Q8NGE5 316 aa18.8■□□□□ 0.6
PTX3-201ENST00000295927 OR1S1Q8NH92 325 aa18.8■□□□□ 0.6
PTX3-201ENST00000295927 CHODLQ9H9P2 273 aa18.8■□□□□ 0.6
PTX3-201ENST00000295927 PIGBOS1A0A0B4J2F0 54 aa18.8■□□□□ 0.6
PTX3-201ENST00000295927 KCNAB3O43448 404 aa18.8■□□□□ 0.6
PTX3-201ENST00000295927 MBPP02686 304 aaPredicted RBP18.8■□□□□ 0.6
PTX3-201ENST00000295927 HEPN1Q6WQI6 88 aa18.8■□□□□ 0.6
PTX3-201ENST00000295927 ACOT7LQ6ZUV0 252 aa18.8■□□□□ 0.6
PTX3-201ENST00000295927 TCTEX1D2Q8WW35 142 aa18.8■□□□□ 0.6
PTX3-201ENST00000295927 HSD17B10Q99714 261 aaKnown RBP18.8■□□□□ 0.6
PTX3-201ENST00000295927 SPIN2AQ99865 258 aa18.8■□□□□ 0.6
PTX3-201ENST00000295927 SPIN2BQ9BPZ2 258 aa18.8■□□□□ 0.6
PTX3-201ENST00000295927 NDUFS7O75251 213 aa18.79■□□□□ 0.6
PTX3-201ENST00000295927 ESCO2Q56NI9 601 aa18.79■□□□□ 0.6
PTX3-201ENST00000295927 OR2B11Q5JQS5 317 aa18.79■□□□□ 0.6
PTX3-201ENST00000295927 INO80EQ8NBZ0 244 aaPredicted RBP18.79■□□□□ 0.6
PTX3-201ENST00000295927 OR4D5Q8NGN0 318 aa18.79■□□□□ 0.6
PTX3-201ENST00000295927 SPOCK3Q9BQ16 436 aa18.79■□□□□ 0.6
PTX3-201ENST00000295927 LSM5Q9Y4Y9 91 aaKnown RBP18.79■□□□□ 0.6
PTX3-201ENST00000295927 A0A0D9SG52 128 aa18.78■□□□□ 0.6
PTX3-201ENST00000295927 LINC00473A8K010 186 aa18.78■□□□□ 0.6
PTX3-201ENST00000295927 RAMP3O60896 148 aa18.78■□□□□ 0.6
PTX3-201ENST00000295927 OR2F2O95006 317 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms