RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 TECRQ9NZ01 308 aaKnown RBP13.97□□□□□ -0.17
GPC1-201ENST00000264039 FBLN5Q9UBX5 448 aa13.97□□□□□ -0.17
GPC1-201ENST00000264039 COL4A4P53420 1690 aaPredicted RBP13.96□□□□□ -0.17
GPC1-201ENST00000264039 SERF2P84101 59 aa13.96□□□□□ -0.17
GPC1-201ENST00000264039 CEACAM16Q2WEN9 425 aa13.96□□□□□ -0.17
GPC1-201ENST00000264039 SPATA46Q5T0L3 261 aa13.96□□□□□ -0.17
GPC1-201ENST00000264039 OR1F12Q8NHA8 337 aa13.96□□□□□ -0.17
GPC1-201ENST00000264039 CDH20Q9HBT6 801 aa13.96□□□□□ -0.17
GPC1-201ENST00000264039 UQCR10Q9UDW1 63 aa13.96□□□□□ -0.17
GPC1-201ENST00000264039 TBL2Q9Y4P3 447 aaKnown RBP13.96□□□□□ -0.17
GPC1-201ENST00000264039 TRAF3IP2O43734 574 aaPredicted RBP13.96□□□□□ -0.17
GPC1-201ENST00000264039 ZIC3O60481 467 aa13.96□□□□□ -0.17
GPC1-201ENST00000264039 LMO1P25800 156 aa13.96□□□□□ -0.17
GPC1-201ENST00000264039 CEACAM8P31997 349 aaPredicted RBP13.96□□□□□ -0.17
GPC1-201ENST00000264039 EXT1Q16394 746 aa13.96□□□□□ -0.17
GPC1-201ENST00000264039 RFESDQ8TAC1 157 aa13.96□□□□□ -0.17
GPC1-201ENST00000264039 RNASEH2CQ8TDP1 164 aaKnown RBP13.96□□□□□ -0.17
GPC1-201ENST00000264039 A0A1B0GW64 132 aa13.95□□□□□ -0.18
GPC1-201ENST00000264039 M0QZ24 198 aa13.95□□□□□ -0.18
GPC1-201ENST00000264039 DEGS1O15121 323 aa13.95□□□□□ -0.18
GPC1-201ENST00000264039 RRP8O43159 456 aaKnown RBP13.95□□□□□ -0.18
GPC1-201ENST00000264039 GLB1P16278 677 aa13.95□□□□□ -0.18
GPC1-201ENST00000264039 H2BFWTQ7Z2G1 175 aa13.95□□□□□ -0.18
GPC1-201ENST00000264039 A0A0G2JRQ6 117 aa13.95□□□□□ -0.18
GPC1-201ENST00000264039 LNP1A1A4G5 178 aa13.95□□□□□ -0.18
GPC1-201ENST00000264039 C5orf49A4QMS7 147 aa13.95□□□□□ -0.18
GPC1-201ENST00000264039 CER1O95813 267 aa13.95□□□□□ -0.18
GPC1-201ENST00000264039 ARL16Q0P5N6 197 aa13.95□□□□□ -0.18
GPC1-201ENST00000264039 GCSAMLQ5JQS6 135 aa13.95□□□□□ -0.18
GPC1-201ENST00000264039 TGIF2LYQ8IUE0 185 aa13.95□□□□□ -0.18
GPC1-201ENST00000264039 WDYHV1Q96HA8 205 aa13.95□□□□□ -0.18
GPC1-201ENST00000264039 ZNF331Q9NQX6 463 aaPredicted RBP13.95□□□□□ -0.18
GPC1-201ENST00000264039 ZFP30Q9Y2G7 519 aa13.95□□□□□ -0.18
GPC1-201ENST00000264039 CA6P23280 308 aa13.95□□□□□ -0.18
GPC1-201ENST00000264039 GABRA2P47869 451 aa13.95□□□□□ -0.18
GPC1-201ENST00000264039 Q5PR19 223 aa13.95□□□□□ -0.18
GPC1-201ENST00000264039 TMEM92Q6UXU6 159 aa13.95□□□□□ -0.18
GPC1-201ENST00000264039 SLC22A18ASQ8N1D0 253 aa13.95□□□□□ -0.18
GPC1-201ENST00000264039 OR8G5Q8NG78 346 aa13.95□□□□□ -0.18
GPC1-201ENST00000264039 KCNIP1Q9NZI2 227 aa13.95□□□□□ -0.18
GPC1-201ENST00000264039 DEFB108AA8MXU0 73 aa13.94□□□□□ -0.18
GPC1-201ENST00000264039 DUX1O43812 170 aa13.94□□□□□ -0.18
GPC1-201ENST00000264039 LILRA1O75019 489 aa13.94□□□□□ -0.18
GPC1-201ENST00000264039 SYNGR4O95473 234 aa13.94□□□□□ -0.18
GPC1-201ENST00000264039 RBM11P57052 281 aaKnown RBP13.94□□□□□ -0.18
GPC1-201ENST00000264039 STUMQ69YW2 141 aa13.94□□□□□ -0.18
GPC1-201ENST00000264039 LCN12Q6JVE5 192 aa13.94□□□□□ -0.18
GPC1-201ENST00000264039 ACSM6Q6P461 480 aa13.94□□□□□ -0.18
GPC1-201ENST00000264039 PLXDC1Q8IUK5 500 aa13.94□□□□□ -0.18
GPC1-201ENST00000264039 PLXNA2O75051 1894 aa13.94□□□□□ -0.18
GPC1-201ENST00000264039 A0A1B0GX78 115 aa13.94□□□□□ -0.18
GPC1-201ENST00000264039 TNFSF13O75888 250 aa13.94□□□□□ -0.18
GPC1-201ENST00000264039 CEACAM6P40199 344 aa13.94□□□□□ -0.18
GPC1-201ENST00000264039 UCP2P55851 309 aa13.94□□□□□ -0.18
GPC1-201ENST00000264039 TMEM242Q9NWH2 141 aa13.94□□□□□ -0.18
GPC1-201ENST00000264039 PRRC2CQ9Y520 2896 aaKnown RBP13.94□□□□□ -0.18
GPC1-201ENST00000264039 SPTY2D1-AS1A0A0U1RR47 76 aa13.94□□□□□ -0.18
GPC1-201ENST00000264039 UMODP07911 640 aa13.94□□□□□ -0.18
GPC1-201ENST00000264039 SRP14P37108 136 aaKnown RBP13.94□□□□□ -0.18
GPC1-201ENST00000264039 DUSP3P51452 185 aaPredicted RBP13.94□□□□□ -0.18
GPC1-201ENST00000264039 PAFAH1B2P68402 229 aa13.94□□□□□ -0.18
GPC1-201ENST00000264039 S100A7AQ86SG5 101 aa13.94□□□□□ -0.18
GPC1-201ENST00000264039 IGKV1-12A0A0C4DH73 117 aa13.93□□□□□ -0.18
GPC1-201ENST00000264039 A0A1W2PQD3 144 aa13.93□□□□□ -0.18
GPC1-201ENST00000264039 SH2D1BO14796 132 aa13.93□□□□□ -0.18
GPC1-201ENST00000264039 IGKV1D-12P01611 117 aa13.93□□□□□ -0.18
GPC1-201ENST00000264039 ID3Q02535 119 aa13.93□□□□□ -0.18
GPC1-201ENST00000264039 ZNF525Q8N782 197 aa13.93□□□□□ -0.18
GPC1-201ENST00000264039 OR4B1Q8NGF8 309 aa13.93□□□□□ -0.18
GPC1-201ENST00000264039 TM2D1Q9BX74 207 aa13.93□□□□□ -0.18
GPC1-201ENST00000264039 SPEGQ15772 3267 aa13.93□□□□□ -0.18
GPC1-201ENST00000264039 A6NCN8 305 aa13.93□□□□□ -0.18
GPC1-201ENST00000264039 OR7C2O60412 319 aa13.93□□□□□ -0.18
GPC1-201ENST00000264039 IGKV3-11P04433 115 aa13.93□□□□□ -0.18
GPC1-201ENST00000264039 MAS1LP35410 378 aa13.93□□□□□ -0.18
GPC1-201ENST00000264039 TFF3Q07654 80 aa13.93□□□□□ -0.18
GPC1-201ENST00000264039 ZNF726P1Q15940 193 aa13.93□□□□□ -0.18
GPC1-201ENST00000264039 STPG4Q8N801 248 aa13.93□□□□□ -0.18
GPC1-201ENST00000264039 NANOS1Q8WY41 292 aaKnown RBP13.93□□□□□ -0.18
GPC1-201ENST00000264039 OR1A1Q9P1Q5 309 aa13.93□□□□□ -0.18
GPC1-201ENST00000264039 WNK2Q9Y3S1 2297 aa13.93□□□□□ -0.18
GPC1-201ENST00000264039 CTXN2P0C2S0 81 aa13.93□□□□□ -0.18
GPC1-201ENST00000264039 PLP2Q04941 152 aa13.93□□□□□ -0.18
GPC1-201ENST00000264039 TMEM211Q6ICI0 200 aa13.93□□□□□ -0.18
GPC1-201ENST00000264039 SLC25A47Q6Q0C1 308 aa13.93□□□□□ -0.18
GPC1-201ENST00000264039 CXCL13O43927 109 aa13.92□□□□□ -0.18
GPC1-201ENST00000264039 SRIP30626 198 aa13.92□□□□□ -0.18
GPC1-201ENST00000264039 LYPD6Q86Y78 171 aa13.92□□□□□ -0.18
GPC1-201ENST00000264039 YPEL4Q96NS1 127 aa13.92□□□□□ -0.18
GPC1-201ENST00000264039 RANBP2P49792 3224 aaKnown RBP13.92□□□□□ -0.18
GPC1-201ENST00000264039 A0A1W2PQF6 199 aa13.92□□□□□ -0.18
GPC1-201ENST00000264039 TMEM210A6NLX4 147 aa13.92□□□□□ -0.18
GPC1-201ENST00000264039 KIR2DL1P43626 348 aaPredicted RBP13.92□□□□□ -0.18
GPC1-201ENST00000264039 SLC24A4Q8NFF2 622 aa13.92□□□□□ -0.18
GPC1-201ENST00000264039 SFRP2Q96HF1 295 aa13.92□□□□□ -0.18
GPC1-201ENST00000264039 IGKV1-27A0A075B6S5 117 aa13.92□□□□□ -0.18
GPC1-201ENST00000264039 IGHV3-43A0A0B4J1X8 118 aa13.92□□□□□ -0.18
GPC1-201ENST00000264039 FBLL1A6NHQ2 334 aaKnown RBP13.92□□□□□ -0.18
GPC1-201ENST00000264039 RPL36A-HNRNPH2H7BZ11 118 aa13.92□□□□□ -0.18
GPC1-201ENST00000264039 GRPP07492 148 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms