RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 GAFA1Q96PS6 74 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 TP53RKQ96S44 253 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 V9GY05 133 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 TMEM8BA6NDV4 472 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 DUS4LO95620 317 aaKnown RBP4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 CSN2P05814 226 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 FAM157CP0CG43 387 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 ARSBP15848 533 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 PAX1P15863 534 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 ZBTB25P24278 435 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 G0S2P27469 103 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 CXADRP78310 365 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 ZNF273Q14593 569 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 DHRS11Q6UWP2 260 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 DTX2Q86UW9 622 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 SCCPDHQ8NBX0 429 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 ZNRF1Q8ND25 227 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 OR1F12Q8NHA8 337 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 SLC25A21Q9BQT8 299 aaPredicted RBP4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 UQCC2Q9BRT2 126 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 RHOFQ9HBH0 211 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 MRPL15Q9P015 296 aaKnown RBP4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 MTFP1Q9UDX5 166 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 SCGB1D2O95969 90 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 CRYBA1P05813 215 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 RRASP10301 218 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 DEFA4P12838 97 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 ADCYAP1P18509 176 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 SRSF3P84103 164 aaKnown RBP4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 PDZK1IP1Q13113 114 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 NCMAPQ5T1S8 102 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 ZNF497Q6ZNH5 498 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 WNT2BQ93097 391 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 APOBEC3DQ96AK3 386 aaPredicted RBP4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 LIN7CQ9NUP9 197 aaKnown RBP4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 IL36GQ9NZH8 169 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 TRAV3A0A0B4J244 114 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 IGKV1-16P04430 117 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 HTR5AP47898 357 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 ZNF718Q3SXZ3 478 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 LCE2DQ5TA82 110 aaPredicted RBP4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 OR56B4Q8NH76 319 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 POM121Q96HA1 1249 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 S1PR3Q99500 378 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 HRASLSQ9HDD0 168 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 DHRS3O75911 302 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 CLEC3BP05452 202 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 CAMLGP49069 296 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 RAB1AP62820 205 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 NDPQ00604 133 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 HABP2Q14520 560 aaPredicted RBP4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 SMIM21Q3B7S5 101 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 BSXQ3C1V8 233 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 PRAMEF6Q5VXH4 476 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 TEX36Q5VZQ5 186 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 PDZD9Q8IXQ8 264 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 FAAP24Q9BTP7 215 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 PHOX2AO14813 284 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 IGKV1D-33P01593 117 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 IGKV1-33P01594 117 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 CRYAAP02489 173 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 TRAPPC2P0DI81 140 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 TRAPPC2BP0DI82 140 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 UCP2P55851 309 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 TIGITQ495A1 244 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 KRTCAP3Q53RY4 240 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 MOB3CQ70IA8 216 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 SLC25A40Q8TBP6 338 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 SLC35E1Q96K37 410 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 RAB1BQ9H0U4 201 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 C17orf98A8MV24 154 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 SRRM5B3KS81 715 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 MPGP29372 298 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 RAP2BP61225 183 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 IL13RA1P78552 427 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 SNTB2Q13425 540 aaKnown RBP4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 C4orf17Q53FE4 359 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 OR2W3Q7Z3T1 314 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 PNKDQ8N490 385 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 C9orf62Q8N4C0 152 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 SAMD12Q8N8I0 201 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 UBALD1Q8TB05 177 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 ESM1Q9NQ30 184 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 SLC2A8Q9NY64 477 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 STRAPQ9Y3F4 350 aaKnown RBP4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 A0A1W2PPV4 95 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 RNASEK-C17orf49H0YIS7 233 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 WDR1O75083 606 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 IGHV2-70P01814 119 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 MAS1P04201 325 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 SULT1A3P0DMM9 295 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 SULT1A4P0DMN0 295 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 LYL1P12980 280 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 ASCL1P50553 236 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 TLE1Q04724 770 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 IDO2Q6ZQW0 420 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 SLC35G3Q8N808 338 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 C15orf54Q8N8G6 183 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 SUN5Q8TC36 379 aa4.55□□□□□ -1.68
TOPBP1-201ENST00000260810 IFI27L2Q9H2X8 130 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms