RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, human

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDHD-209	ENST00000640554	OR8H1	Q8NGG4	311 aa		11.4	□□□□□ -0.58
SDHD-209	ENST00000640554	OR52L2P	Q8NGH6	319 aa		11.4	□□□□□ -0.58
SDHD-209	ENST00000640554	OR2T10	Q8NGZ9	312 aa		11.4	□□□□□ -0.58
SDHD-209	ENST00000640554	SETD6	Q8TBK2	473 aa		11.4	□□□□□ -0.58
SDHD-209	ENST00000640554	IL1F10	Q8WWZ1	152 aa		11.4	□□□□□ -0.58
SDHD-209	ENST00000640554	ATG5	Q9H1Y0	275 aa		11.4	□□□□□ -0.58
SDHD-209	ENST00000640554	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	11.4	□□□□□ -0.58
SDHD-209	ENST00000640554	PIPOX	Q9P0Z9	390 aa		11.4	□□□□□ -0.58
SDHD-209	ENST00000640554	DAPK2	Q9UIK4	370 aa		11.4	□□□□□ -0.58
SDHD-209	ENST00000640554	MOB4	Q9Y3A3	225 aa		11.4	□□□□□ -0.58
SDHD-209	ENST00000640554	ETV7	Q9Y603	341 aa		11.4	□□□□□ -0.58
SDHD-209	ENST00000640554	FBN3	Q75N90	2809 aa		11.39	□□□□□ -0.59
SDHD-209	ENST00000640554	TRDC	B7Z8K6	153 aa		11.39	□□□□□ -0.59
SDHD-209	ENST00000640554	AIRE	O43918	545 aa		11.39	□□□□□ -0.59
SDHD-209	ENST00000640554	SLC2A2	P11168	524 aa	Predicted RBP	11.39	□□□□□ -0.59
SDHD-209	ENST00000640554	HIST1H1D	P16402	221 aa	Known RBP	11.39	□□□□□ -0.59
SDHD-209	ENST00000640554	TMEM11	P17152	192 aa		11.39	□□□□□ -0.59
SDHD-209	ENST00000640554	PPP1CC	P36873	323 aa	Known RBP	11.39	□□□□□ -0.59
SDHD-209	ENST00000640554	VDAC2	P45880	294 aa	Predicted RBP	11.39	□□□□□ -0.59
SDHD-209	ENST00000640554	HLA-DRB3	P79483	266 aa		11.39	□□□□□ -0.59
SDHD-209	ENST00000640554	PITPNA	Q00169	270 aa		11.39	□□□□□ -0.59
SDHD-209	ENST00000640554	DIAPH2-AS1	Q14236	149 aa		11.39	□□□□□ -0.59
SDHD-209	ENST00000640554	LYG1	Q8N1E2	194 aa		11.39	□□□□□ -0.59
SDHD-209	ENST00000640554	OR4A4P	Q8NGN8	299 aa		11.39	□□□□□ -0.59
SDHD-209	ENST00000640554	PHF21A	Q96BD5	680 aa		11.39	□□□□□ -0.59
SDHD-209	ENST00000640554	SERTAD4	Q9NUC0	356 aa		11.39	□□□□□ -0.59
SDHD-209	ENST00000640554		A0A0A6YYH2	397 aa		11.38	□□□□□ -0.59
SDHD-209	ENST00000640554		A6NJ64	397 aa		11.38	□□□□□ -0.59
SDHD-209	ENST00000640554	MFNG	O00587	321 aa		11.38	□□□□□ -0.59
SDHD-209	ENST00000640554	RAB29	O14966	203 aa		11.38	□□□□□ -0.59
SDHD-209	ENST00000640554	SLC31A2	O15432	143 aa		11.38	□□□□□ -0.59
SDHD-209	ENST00000640554	HSPA12A	O43301	675 aa		11.38	□□□□□ -0.59
SDHD-209	ENST00000640554	IGKV1D-33	P01593	117 aa		11.38	□□□□□ -0.59
SDHD-209	ENST00000640554	IGKV1-33	P01594	117 aa		11.38	□□□□□ -0.59
SDHD-209	ENST00000640554	TALDO1	P37837	337 aa		11.38	□□□□□ -0.59
SDHD-209	ENST00000640554		Q6ZS49	121 aa		11.38	□□□□□ -0.59
SDHD-209	ENST00000640554	KLHDC1	Q8N7A1	406 aa		11.38	□□□□□ -0.59
SDHD-209	ENST00000640554	YIPF6	Q96EC8	236 aa		11.38	□□□□□ -0.59
SDHD-209	ENST00000640554	S1PR3	Q99500	378 aa		11.38	□□□□□ -0.59
SDHD-209	ENST00000640554	WNT10A	Q9GZT5	417 aa		11.38	□□□□□ -0.59
SDHD-209	ENST00000640554	SLC23A1	Q9UHI7	598 aa		11.38	□□□□□ -0.59
SDHD-209	ENST00000640554	KCNK7	Q9Y2U2	307 aa		11.38	□□□□□ -0.59
SDHD-209	ENST00000640554	SIGLEC9	Q9Y336	463 aa		11.38	□□□□□ -0.59
SDHD-209	ENST00000640554	MOS	P00540	346 aa		11.37	□□□□□ -0.59
SDHD-209	ENST00000640554	GSTP1	P09211	210 aa	Known RBP	11.37	□□□□□ -0.59
SDHD-209	ENST00000640554	VSIG10L2	P0DP72	767 aa		11.37	□□□□□ -0.59
SDHD-209	ENST00000640554	DTYMK	P23919	212 aa		11.37	□□□□□ -0.59
SDHD-209	ENST00000640554	CEACAM6	P40199	344 aa		11.37	□□□□□ -0.59
SDHD-209	ENST00000640554	REG1B	P48304	166 aa		11.37	□□□□□ -0.59
SDHD-209	ENST00000640554	KRTAP10-3	P60369	221 aa		11.37	□□□□□ -0.59
SDHD-209	ENST00000640554	MXD1	Q05195	221 aa		11.37	□□□□□ -0.59
SDHD-209	ENST00000640554	PLA2G7	Q13093	441 aa		11.37	□□□□□ -0.59
SDHD-209	ENST00000640554	ARFRP1	Q13795	201 aa		11.37	□□□□□ -0.59
SDHD-209	ENST00000640554	GNMT	Q14749	295 aa		11.37	□□□□□ -0.59
SDHD-209	ENST00000640554	MOGAT2	Q3SYC2	334 aa		11.37	□□□□□ -0.59
SDHD-209	ENST00000640554	CDNF	Q49AH0	187 aa		11.37	□□□□□ -0.59
SDHD-209	ENST00000640554	ABCA11P	Q4W5N1	156 aa		11.37	□□□□□ -0.59
SDHD-209	ENST00000640554	EAF1	Q96JC9	268 aa	Predicted RBP	11.37	□□□□□ -0.59
SDHD-209	ENST00000640554	HDHD3	Q9BSH5	251 aa	Predicted RBP	11.37	□□□□□ -0.59
SDHD-209	ENST00000640554	TOLLIP	Q9H0E2	274 aa		11.37	□□□□□ -0.59
SDHD-209	ENST00000640554	DCSTAMP	Q9H295	470 aa		11.37	□□□□□ -0.59
SDHD-209	ENST00000640554		A0A0B4J203	849 aa		11.36	□□□□□ -0.59
SDHD-209	ENST00000640554	FABP7	O15540	132 aa		11.36	□□□□□ -0.59
SDHD-209	ENST00000640554	AMY1A	P04745	511 aa		11.36	□□□□□ -0.59
SDHD-209	ENST00000640554	AMY2A	P04746	511 aa		11.36	□□□□□ -0.59
SDHD-209	ENST00000640554	SCT	P09683	121 aa		11.36	□□□□□ -0.59
SDHD-209	ENST00000640554	GNB3	P16520	340 aa		11.36	□□□□□ -0.59
SDHD-209	ENST00000640554	SRSF4	Q08170	494 aa	Known RBP	11.36	□□□□□ -0.59
SDHD-209	ENST00000640554	HNF4G	Q14541	408 aa		11.36	□□□□□ -0.59
SDHD-209	ENST00000640554	PNLIPRP3	Q17RR3	467 aa		11.36	□□□□□ -0.59
SDHD-209	ENST00000640554	C2orf68	Q2NKX9	166 aa		11.36	□□□□□ -0.59
SDHD-209	ENST00000640554	IDNK	Q5T6J7	187 aa		11.36	□□□□□ -0.59
SDHD-209	ENST00000640554	FAM53A	Q6NSI3	398 aa	Predicted RBP	11.36	□□□□□ -0.59
SDHD-209	ENST00000640554		Q6ZPA2	131 aa		11.36	□□□□□ -0.59
SDHD-209	ENST00000640554	ZNF833P	Q6ZTB9	187 aa		11.36	□□□□□ -0.59
SDHD-209	ENST00000640554		Q8N6K4	173 aa		11.36	□□□□□ -0.59
SDHD-209	ENST00000640554	RHBDL2	Q9NX52	303 aa		11.36	□□□□□ -0.59
SDHD-209	ENST00000640554	SMIM30	A4D0T7	59 aa		11.35	□□□□□ -0.59
SDHD-209	ENST00000640554	FCGR3A	P08637	254 aa		11.35	□□□□□ -0.59
SDHD-209	ENST00000640554	CTXN2	P0C2S0	81 aa		11.35	□□□□□ -0.59
SDHD-209	ENST00000640554	SNRPB	P14678	240 aa	Known RBP	11.35	□□□□□ -0.59
SDHD-209	ENST00000640554	MC5R	P33032	325 aa		11.35	□□□□□ -0.59
SDHD-209	ENST00000640554	LSAMP	Q13449	338 aa		11.35	□□□□□ -0.59
SDHD-209	ENST00000640554	HACD4	Q5VWC8	232 aa		11.35	□□□□□ -0.59
SDHD-209	ENST00000640554	TREML4	Q6UXN2	200 aa		11.35	□□□□□ -0.59
SDHD-209	ENST00000640554	CENPV	Q7Z7K6	275 aa	Predicted RBP	11.35	□□□□□ -0.59
SDHD-209	ENST00000640554	ODF3L1	Q8IXM7	274 aa		11.35	□□□□□ -0.59
SDHD-209	ENST00000640554	C5orf56	Q8N8D9	126 aa		11.35	□□□□□ -0.59
SDHD-209	ENST00000640554	OR10J5	Q8NHC4	309 aa		11.35	□□□□□ -0.59
SDHD-209	ENST00000640554	LGALS14	Q8TCE9	139 aa		11.35	□□□□□ -0.59
SDHD-209	ENST00000640554	WIPF2	Q8TF74	440 aa	Predicted RBP	11.35	□□□□□ -0.59
SDHD-209	ENST00000640554	CYYR1	Q96J86	154 aa		11.35	□□□□□ -0.59
SDHD-209	ENST00000640554	AGMAT	Q9BSE5	352 aa		11.35	□□□□□ -0.59
SDHD-209	ENST00000640554	C11orf54	Q9H0W9	315 aa	Predicted RBP	11.35	□□□□□ -0.59
SDHD-209	ENST00000640554	RNF167	Q9H6Y7	350 aa		11.35	□□□□□ -0.59
SDHD-209	ENST00000640554	DIABLO	Q9NR28	239 aa		11.35	□□□□□ -0.59
SDHD-209	ENST00000640554	LIN7C	Q9NUP9	197 aa	Known RBP	11.35	□□□□□ -0.59
SDHD-209	ENST00000640554	SPATA2	Q9UM82	520 aa		11.35	□□□□□ -0.59
SDHD-209	ENST00000640554		A0A075B6Q4	140 aa		11.34	□□□□□ -0.59
SDHD-209	ENST00000640554	NCBP2L	A6PVI3	153 aa	Known RBP	11.34	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms