RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 PLPPR5Q32ZL2 321 aa13.96□□□□□ -0.17
CLN5-208ENST00000636183 LSMEM1Q8N8F7 131 aa13.96□□□□□ -0.17
CLN5-208ENST00000636183 OR4C5Q8NGB2 326 aa13.96□□□□□ -0.17
CLN5-208ENST00000636183 OR2W1Q9Y3N9 320 aa13.96□□□□□ -0.17
CLN5-208ENST00000636183 C1QBP02746 253 aa13.96□□□□□ -0.18
CLN5-208ENST00000636183 PSG4Q00888 419 aa13.96□□□□□ -0.18
CLN5-208ENST00000636183 HIST1H1AQ02539 215 aaPredicted RBP13.96□□□□□ -0.18
CLN5-208ENST00000636183 C19orf43Q9BQ61 176 aa13.96□□□□□ -0.18
CLN5-208ENST00000636183 MRM2Q9UI43 246 aaKnown RBP13.96□□□□□ -0.18
CLN5-208ENST00000636183 S4R3C0 116 aa13.96□□□□□ -0.18
CLN5-208ENST00000636183 CACNA1CQ13936 2221 aa13.96□□□□□ -0.18
CLN5-208ENST00000636183 NHSQ6T4R5 1651 aa13.96□□□□□ -0.18
CLN5-208ENST00000636183 TRGV2A0A075B6R0 118 aa13.96□□□□□ -0.18
CLN5-208ENST00000636183 ZXDCQ2QGD7 858 aaPredicted RBP13.96□□□□□ -0.18
CLN5-208ENST00000636183 OR4A47Q6IF82 309 aa13.96□□□□□ -0.18
CLN5-208ENST00000636183 GTSCR1Q86UQ5 136 aa13.96□□□□□ -0.18
CLN5-208ENST00000636183 RIMKLAQ8IXN7 391 aa13.96□□□□□ -0.18
CLN5-208ENST00000636183 LRRC3BQ96PB8 259 aa13.96□□□□□ -0.18
CLN5-208ENST00000636183 TMEFF2Q9UIK5 374 aaPredicted RBP13.96□□□□□ -0.18
CLN5-208ENST00000636183 CDC42EP2O14613 210 aa13.95□□□□□ -0.18
CLN5-208ENST00000636183 TGOLN2O43493 480 aa13.95□□□□□ -0.18
CLN5-208ENST00000636183 HBZP02008 142 aa13.95□□□□□ -0.18
CLN5-208ENST00000636183 JUNBP17275 347 aaPredicted RBP13.95□□□□□ -0.18
CLN5-208ENST00000636183 MFAP4P55083 255 aa13.95□□□□□ -0.18
CLN5-208ENST00000636183 C12orf73Q69YU5 71 aa13.95□□□□□ -0.18
CLN5-208ENST00000636183 SIGIRRQ6IA17 410 aa13.95□□□□□ -0.18
CLN5-208ENST00000636183 DUX3Q96PT4 197 aa13.95□□□□□ -0.18
CLN5-208ENST00000636183 SLC17A5Q9NRA2 495 aa13.95□□□□□ -0.18
CLN5-208ENST00000636183 PCM1Q15154 2024 aa13.95□□□□□ -0.18
CLN5-208ENST00000636183 PPYP01298 95 aa13.95□□□□□ -0.18
CLN5-208ENST00000636183 HINT1P49773 126 aaPredicted RBP13.95□□□□□ -0.18
CLN5-208ENST00000636183 MPV17LQ2QL34 196 aa13.95□□□□□ -0.18
CLN5-208ENST00000636183 MARVELD3Q96A59 401 aa13.95□□□□□ -0.18
CLN5-208ENST00000636183 RAB37Q96AX2 223 aa13.95□□□□□ -0.18
CLN5-208ENST00000636183 SLC25A33Q9BSK2 321 aa13.95□□□□□ -0.18
CLN5-208ENST00000636183 IFNL4K9M1U5 179 aa13.95□□□□□ -0.18
CLN5-208ENST00000636183 SYNGR3O43761 229 aa13.95□□□□□ -0.18
CLN5-208ENST00000636183 CTF1Q16619 201 aa13.95□□□□□ -0.18
CLN5-208ENST00000636183 MOGAT2Q3SYC2 334 aa13.95□□□□□ -0.18
CLN5-208ENST00000636183 SLC16A13Q7RTY0 426 aa13.95□□□□□ -0.18
CLN5-208ENST00000636183 BET1LQ9NYM9 111 aa13.95□□□□□ -0.18
CLN5-208ENST00000636183 NINQ8N4C6 2090 aa13.95□□□□□ -0.18
CLN5-208ENST00000636183 MGST3O14880 152 aa13.95□□□□□ -0.18
CLN5-208ENST00000636183 APOBEC3AP31941 199 aaPredicted RBP13.95□□□□□ -0.18
CLN5-208ENST00000636183 HIST3H3Q16695 136 aa13.95□□□□□ -0.18
CLN5-208ENST00000636183 ZAR1Q86SH2 424 aa13.95□□□□□ -0.18
CLN5-208ENST00000636183 RPL36A-HNRNPH2H7BZ11 118 aa13.95□□□□□ -0.18
CLN5-208ENST00000636183 FAM27E3Q08E93 113 aa13.95□□□□□ -0.18
CLN5-208ENST00000636183 LIMS2Q7Z4I7 341 aa13.95□□□□□ -0.18
CLN5-208ENST00000636183 SSBP3Q9BWW4 388 aaPredicted RBP13.95□□□□□ -0.18
CLN5-208ENST00000636183 DTX4Q9Y2E6 619 aa13.95□□□□□ -0.18
CLN5-208ENST00000636183 B9A039 149 aa13.94□□□□□ -0.18
CLN5-208ENST00000636183 TSPOP30536 169 aa13.94□□□□□ -0.18
CLN5-208ENST00000636183 TMEM255AQ5JRV8 349 aa13.94□□□□□ -0.18
CLN5-208ENST00000636183 IDI2-AS1Q9NZ38 188 aa13.94□□□□□ -0.18
CLN5-208ENST00000636183 DDX60LQ5H9U9 1706 aaKnown RBP13.94□□□□□ -0.18
CLN5-208ENST00000636183 GCSAMLQ5JQS6 135 aa13.94□□□□□ -0.18
CLN5-208ENST00000636183 FAM209BQ5JX69 171 aa13.94□□□□□ -0.18
CLN5-208ENST00000636183 HDHD3Q9BSH5 251 aaPredicted RBP13.94□□□□□ -0.18
CLN5-208ENST00000636183 PSCAO43653 123 aa13.94□□□□□ -0.18
CLN5-208ENST00000636183 NDUFA2O43678 99 aa13.94□□□□□ -0.18
CLN5-208ENST00000636183 SUMO2P61956 95 aaKnown RBP13.94□□□□□ -0.18
CLN5-208ENST00000636183 HMGCLL1Q8TB92 370 aa13.94□□□□□ -0.18
CLN5-208ENST00000636183 PGLYRP3Q96LB9 341 aa13.94□□□□□ -0.18
CLN5-208ENST00000636183 F5P12259 2224 aa13.94□□□□□ -0.18
CLN5-208ENST00000636183 FOXS1O43638 330 aa13.94□□□□□ -0.18
CLN5-208ENST00000636183 FGF5P12034 268 aa13.94□□□□□ -0.18
CLN5-208ENST00000636183 MPV17P39210 176 aa13.94□□□□□ -0.18
CLN5-208ENST00000636183 DHRS2Q13268 280 aa13.94□□□□□ -0.18
CLN5-208ENST00000636183 GSX2Q9BZM3 304 aa13.94□□□□□ -0.18
CLN5-208ENST00000636183 CORTO00230 105 aa13.94□□□□□ -0.18
CLN5-208ENST00000636183 PEBP1P30086 187 aaKnown RBP13.94□□□□□ -0.18
CLN5-208ENST00000636183 CX3CL1P78423 397 aa13.94□□□□□ -0.18
CLN5-208ENST00000636183 LINC01587Q99440 93 aa13.94□□□□□ -0.18
CLN5-208ENST00000636183 ELOVL5Q9NYP7 299 aa13.93□□□□□ -0.18
CLN5-208ENST00000636183 RPL29P47914 159 aaKnown RBP13.93□□□□□ -0.18
CLN5-208ENST00000636183 ZNF561Q8N587 486 aa13.93□□□□□ -0.18
CLN5-208ENST00000636183 MANBALQ9NQG1 85 aa13.93□□□□□ -0.18
CLN5-208ENST00000636183 FCGR3AP08637 254 aa13.93□□□□□ -0.18
CLN5-208ENST00000636183 SSTR5P35346 364 aa13.93□□□□□ -0.18
CLN5-208ENST00000636183 TRIP11Q15643 1979 aa13.93□□□□□ -0.18
CLN5-208ENST00000636183 BAK1Q16611 211 aa13.93□□□□□ -0.18
CLN5-208ENST00000636183 WDR73Q6P4I2 378 aa13.93□□□□□ -0.18
CLN5-208ENST00000636183 LINC00596Q86U02 117 aa13.93□□□□□ -0.18
CLN5-208ENST00000636183 KLK15Q9H2R5 256 aa13.93□□□□□ -0.18
CLN5-208ENST00000636183 GP6Q9HCN6 339 aa13.93□□□□□ -0.18
CLN5-208ENST00000636183 FOXD3Q9UJU5 478 aaPredicted RBP13.93□□□□□ -0.18
CLN5-208ENST00000636183 TRPM6Q9BX84 2022 aa13.93□□□□□ -0.18
CLN5-208ENST00000636183 AURKAIP1Q9NWT8 199 aaPredicted RBP13.93□□□□□ -0.18
CLN5-208ENST00000636183 ADAP1O75689 374 aa13.93□□□□□ -0.18
CLN5-208ENST00000636183 ZNF415Q09FC8 603 aa13.93□□□□□ -0.18
CLN5-208ENST00000636183 SP7Q8TDD2 431 aaPredicted RBP13.93□□□□□ -0.18
CLN5-208ENST00000636183 AQP10Q96PS8 301 aa13.93□□□□□ -0.18
CLN5-208ENST00000636183 PLPP2O43688 288 aa13.92□□□□□ -0.18
CLN5-208ENST00000636183 IL24Q13007 206 aa13.92□□□□□ -0.18
CLN5-208ENST00000636183 C12orf54Q6X4T0 127 aa13.92□□□□□ -0.18
CLN5-208ENST00000636183 C17orf47Q8NEP4 570 aa13.92□□□□□ -0.18
CLN5-208ENST00000636183 TMEM101Q96IK0 257 aa13.92□□□□□ -0.18
CLN5-208ENST00000636183 CALYQ9NYX4 217 aa13.92□□□□□ -0.18
CLN5-208ENST00000636183 FRRS1LQ9P0K9 344 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms