RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 UMODP07911 640 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 IGKV1-13P0DP09 117 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 BCL3P20749 454 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 TUBG1P23258 451 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 CD82P27701 267 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 SRD5A2P31213 254 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 OR5I1Q13606 314 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 DAZAP2Q15038 168 aaPredicted RBP7.44□□□□□ -1.22
VCL-207ENST00000624354 P2RY6Q15077 328 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 BATFQ16520 125 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 AARDQ4LEZ3 155 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 LRP11Q86VZ4 500 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 Q8NFD4 153 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 OR5D13Q8NGL4 314 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 IL22RA2Q969J5 263 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 SH2D2AQ9NP31 389 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 POLR3KQ9Y2Y1 108 aaPredicted RBP7.44□□□□□ -1.22
VCL-207ENST00000624354 PIGBOS1A0A0B4J2F0 54 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 LY6G6EA0A0G2JKS1 128 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 ZNF705FA8MVS1 300 aaPredicted RBP7.44□□□□□ -1.22
VCL-207ENST00000624354 H0Y980 276 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 GDF9O60383 454 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 TUSC2O75896 110 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 ZNF705DP0CH99 300 aaPredicted RBP7.44□□□□□ -1.22
VCL-207ENST00000624354 ZNF705BP0CI00 300 aaPredicted RBP7.44□□□□□ -1.22
VCL-207ENST00000624354 IDH3GP51553 393 aaPredicted RBP7.44□□□□□ -1.22
VCL-207ENST00000624354 FGF12P61328 243 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 C17orf78Q8N4C9 275 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 SPEM1Q8N4L4 309 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 C22orf15Q8WYQ4 148 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 SPSB4Q96A44 273 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 C1QTNF5Q9BXJ0 243 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 CTDSP1Q9GZU7 261 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 PRDM14Q9GZV8 571 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 GPR35Q9HC97 309 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 PARD6AQ9NPB6 346 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 GNG13Q9P2W3 67 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 LAMP3Q9UQV4 416 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 U3KQA8 63 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 HEATR1Q9H583 2144 aaKnown RBP7.43□□□□□ -1.22
VCL-207ENST00000624354 DMXL2Q8TDJ6 3036 aa7.43□□□□□ -1.22
VCL-207ENST00000624354 HSPB6O14558 160 aa7.43□□□□□ -1.22
VCL-207ENST00000624354 P04436 131 aa7.43□□□□□ -1.22
VCL-207ENST00000624354 OR10J1P30954 320 aa7.43□□□□□ -1.22
VCL-207ENST00000624354 BRS3P32247 399 aa7.43□□□□□ -1.22
VCL-207ENST00000624354 ELLP55199 621 aaPredicted RBP7.43□□□□□ -1.22
VCL-207ENST00000624354 IL11RAQ14626 422 aa7.43□□□□□ -1.22
VCL-207ENST00000624354 ZNF468Q5VIY5 522 aaPredicted RBP7.43□□□□□ -1.22
VCL-207ENST00000624354 OR56B2PQ8NGI1 322 aa7.43□□□□□ -1.22
VCL-207ENST00000624354 OR10G4Q8NGN3 311 aa7.43□□□□□ -1.22
VCL-207ENST00000624354 PLPPR1Q8TBJ4 325 aa7.43□□□□□ -1.22
VCL-207ENST00000624354 SGCZQ96LD1 299 aa7.43□□□□□ -1.22
VCL-207ENST00000624354 LRFN1Q9P244 771 aa7.43□□□□□ -1.22
VCL-207ENST00000624354 ATP23Q9Y6H3 246 aa7.43□□□□□ -1.22
VCL-207ENST00000624354 R4GN57 208 aa7.43□□□□□ -1.22
VCL-207ENST00000624354 TRAV1-1A0A0B4J248 108 aa7.43□□□□□ -1.22
VCL-207ENST00000624354 LOC102723971A0A1B0GUV8 181 aa7.43□□□□□ -1.22
VCL-207ENST00000624354 H3BP45 60 aa7.43□□□□□ -1.22
VCL-207ENST00000624354 HPRT1P00492 218 aa7.43□□□□□ -1.22
VCL-207ENST00000624354 SELEP16581 610 aa7.43□□□□□ -1.22
VCL-207ENST00000624354 CCNOP22674 350 aa7.43□□□□□ -1.22
VCL-207ENST00000624354 PAX9P55771 341 aa7.43□□□□□ -1.22
VCL-207ENST00000624354 MLF1P58340 268 aa7.43□□□□□ -1.22
VCL-207ENST00000624354 B3GALT5-AS1P59052 145 aa7.43□□□□□ -1.22
VCL-207ENST00000624354 MPV17LQ2QL34 196 aa7.43□□□□□ -1.22
VCL-207ENST00000624354 GGNQ86UU5 652 aa7.43□□□□□ -1.22
VCL-207ENST00000624354 H1FOOQ8IZA3 346 aaPredicted RBP7.43□□□□□ -1.22
VCL-207ENST00000624354 AGBL5Q8NDL9 886 aa7.43□□□□□ -1.22
VCL-207ENST00000624354 OR10D3Q8NH80 312 aa7.43□□□□□ -1.22
VCL-207ENST00000624354 OR51B6Q9H340 312 aa7.43□□□□□ -1.22
VCL-207ENST00000624354 CALHM2Q9HA72 323 aa7.43□□□□□ -1.22
VCL-207ENST00000624354 NAGKQ9UJ70 344 aa7.43□□□□□ -1.22
VCL-207ENST00000624354 RNF115Q9Y4L5 304 aa7.43□□□□□ -1.22
VCL-207ENST00000624354 ZFP92A6NM28 416 aa7.42□□□□□ -1.22
VCL-207ENST00000624354 TRAPPC2LH3BP13 241 aa7.42□□□□□ -1.22
VCL-207ENST00000624354 PGLYRP1O75594 196 aaPredicted RBP7.42□□□□□ -1.22
VCL-207ENST00000624354 CNOT4O95628 575 aaKnown RBP7.42□□□□□ -1.22
VCL-207ENST00000624354 SERPINE2P07093 398 aa7.42□□□□□ -1.22
VCL-207ENST00000624354 F2RP25116 425 aa7.42□□□□□ -1.22
VCL-207ENST00000624354 PDLIM4P50479 330 aa7.42□□□□□ -1.22
VCL-207ENST00000624354 PRDX4Q13162 271 aa7.42□□□□□ -1.22
VCL-207ENST00000624354 TRIM61Q5EBN2 209 aa7.42□□□□□ -1.22
VCL-207ENST00000624354 MKXQ8IYA7 352 aa7.42□□□□□ -1.22
VCL-207ENST00000624354 SAXO1Q8IYX7 474 aa7.42□□□□□ -1.22
VCL-207ENST00000624354 OR2V1Q8NHB1 315 aa7.42□□□□□ -1.22
VCL-207ENST00000624354 SCGB1C1Q8TD33 95 aa7.42□□□□□ -1.22
VCL-207ENST00000624354 TMEM37Q8WXS4 190 aa7.42□□□□□ -1.22
VCL-207ENST00000624354 GAL3ST2Q9H3Q3 398 aa7.42□□□□□ -1.22
VCL-207ENST00000624354 DNAJC4Q9NNZ3 241 aa7.42□□□□□ -1.22
VCL-207ENST00000624354 TAAR3PQ9P1P4 343 aa7.42□□□□□ -1.22
VCL-207ENST00000624354 DNAJC13O75165 2243 aa7.42□□□□□ -1.22
VCL-207ENST00000624354 KLF7O75840 302 aaPredicted RBP7.42□□□□□ -1.22
VCL-207ENST00000624354 TRAPPC6AO75865 159 aa7.42□□□□□ -1.22
VCL-207ENST00000624354 GPM6AP51674 278 aa7.42□□□□□ -1.22
VCL-207ENST00000624354 FBXW9Q5XUX1 488 aa7.42□□□□□ -1.22
VCL-207ENST00000624354 WDR25Q64LD2 544 aaPredicted RBP7.42□□□□□ -1.22
VCL-207ENST00000624354 ETFRF1Q6IPR1 90 aa7.42□□□□□ -1.22
VCL-207ENST00000624354 SSX7Q7RTT5 188 aa7.42□□□□□ -1.22
VCL-207ENST00000624354 CPEB3Q8NE35 698 aaKnown RBP7.42□□□□□ -1.22
VCL-207ENST00000624354 RAB40CQ96S21 281 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms