RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 RAB12Q6IQ22 244 aa17.93■□□□□ 0.46
MMP28-203ENST00000612672 STX19Q8N4C7 294 aa17.93■□□□□ 0.46
MMP28-203ENST00000612672 GPR148Q8TDV2 347 aa17.93■□□□□ 0.46
MMP28-203ENST00000612672 MRPL48Q96GC5 212 aaKnown RBP17.93■□□□□ 0.46
MMP28-203ENST00000612672 OR4C12Q96R67 309 aa17.93■□□□□ 0.46
MMP28-203ENST00000612672 ZNF184Q99676 751 aaPredicted RBP17.93■□□□□ 0.46
MMP28-203ENST00000612672 SPATA25Q9BR10 227 aa17.93■□□□□ 0.46
MMP28-203ENST00000612672 FAM103A1Q9BTL3 118 aaKnown RBP17.93■□□□□ 0.46
MMP28-203ENST00000612672 NKX1-2Q9UD57 310 aaPredicted RBP17.93■□□□□ 0.46
MMP28-203ENST00000612672 NUBP2Q9Y5Y2 271 aa17.93■□□□□ 0.46
MMP28-203ENST00000612672 SAA2-SAA4A0A096LPE2 208 aa17.92■□□□□ 0.46
MMP28-203ENST00000612672 HSPB1P04792 205 aaKnown RBP17.92■□□□□ 0.46
MMP28-203ENST00000612672 SAA2P0DJI9 122 aaPredicted RBP17.92■□□□□ 0.46
MMP28-203ENST00000612672 GTF2F2P13984 249 aa17.92■□□□□ 0.46
MMP28-203ENST00000612672 BDKRB2P30411 391 aa17.92■□□□□ 0.46
MMP28-203ENST00000612672 SIGIRRQ6IA17 410 aa17.92■□□□□ 0.46
MMP28-203ENST00000612672 MS4A10Q96PG2 267 aa17.92■□□□□ 0.46
MMP28-203ENST00000612672 MBNL3Q9NUK0 354 aaKnown RBP17.92■□□□□ 0.46
MMP28-203ENST00000612672 MCRIP1C9JLW8 97 aa17.91■□□□□ 0.46
MMP28-203ENST00000612672 SC5DO75845 299 aa17.91■□□□□ 0.46
MMP28-203ENST00000612672 MRPL28Q13084 256 aaKnown RBP17.91■□□□□ 0.46
MMP28-203ENST00000612672 FAM131AQ6UXB0 335 aa17.91■□□□□ 0.46
MMP28-203ENST00000612672 MRPL30Q8TCC3 161 aaKnown RBP17.91■□□□□ 0.46
MMP28-203ENST00000612672 RHOVQ96L33 236 aa17.91■□□□□ 0.46
MMP28-203ENST00000612672 RSRP1Q9BUV0 290 aa17.91■□□□□ 0.46
MMP28-203ENST00000612672 CST11Q9H112 138 aa17.91■□□□□ 0.46
MMP28-203ENST00000612672 IFI27L2Q9H2X8 130 aa17.91■□□□□ 0.46
MMP28-203ENST00000612672 TRAV8-7A0A075B6U6 113 aa17.9■□□□□ 0.46
MMP28-203ENST00000612672 ARSBP15848 533 aa17.9■□□□□ 0.46
MMP28-203ENST00000612672 PPP3R1P63098 170 aa17.9■□□□□ 0.46
MMP28-203ENST00000612672 C1orf146Q5VVC0 180 aa17.9■□□□□ 0.46
MMP28-203ENST00000612672 SGPP2Q8IWX5 399 aa17.9■□□□□ 0.46
MMP28-203ENST00000612672 MUL1Q969V5 352 aa17.9■□□□□ 0.46
MMP28-203ENST00000612672 S100A13Q99584 98 aa17.9■□□□□ 0.46
MMP28-203ENST00000612672 THAP7Q9BT49 309 aaPredicted RBP17.9■□□□□ 0.46
MMP28-203ENST00000612672 BANF2Q9H503 90 aa17.9■□□□□ 0.46
MMP28-203ENST00000612672 STUB1Q9UNE7 303 aa17.9■□□□□ 0.46
MMP28-203ENST00000612672 PEX16Q9Y5Y5 336 aa17.9■□□□□ 0.46
MMP28-203ENST00000612672 UBE2QL1A1L167 161 aa17.89■□□□□ 0.45
MMP28-203ENST00000612672 ZNF780AO75290 641 aaPredicted RBP17.89■□□□□ 0.45
MMP28-203ENST00000612672 FADS2O95864 444 aaKnown RBP17.89■□□□□ 0.45
MMP28-203ENST00000612672 CD2P06729 351 aa17.89■□□□□ 0.45
MMP28-203ENST00000612672 ZNF660Q6AZW8 331 aaPredicted RBP17.89■□□□□ 0.45
MMP28-203ENST00000612672 CD200R1LQ6Q8B3 271 aa17.89■□□□□ 0.45
MMP28-203ENST00000612672 IL34Q6ZMJ4 242 aa17.89■□□□□ 0.45
MMP28-203ENST00000612672 PAK1IP1Q9NWT1 392 aaPredicted RBP17.89■□□□□ 0.45
MMP28-203ENST00000612672 CHCHD3Q9NX63 227 aaKnown RBP17.89■□□□□ 0.45
MMP28-203ENST00000612672 JPT1Q9UK76 154 aa17.89■□□□□ 0.45
MMP28-203ENST00000612672 RRHO14718 337 aa17.88■□□□□ 0.45
MMP28-203ENST00000612672 LALBAP00709 142 aa17.88■□□□□ 0.45
MMP28-203ENST00000612672 TPPP2P59282 170 aa17.88■□□□□ 0.45
MMP28-203ENST00000612672 RAB40BQ12829 278 aa17.88■□□□□ 0.45
MMP28-203ENST00000612672 RIPK1Q13546 671 aa17.88■□□□□ 0.45
MMP28-203ENST00000612672 OR2G6Q5TZ20 316 aa17.88■□□□□ 0.45
MMP28-203ENST00000612672 GLIPR1L1Q6UWM5 242 aa17.88■□□□□ 0.45
MMP28-203ENST00000612672 GLDNQ6ZMI3 551 aaPredicted RBP17.88■□□□□ 0.45
MMP28-203ENST00000612672 APH1BQ8WW43 257 aa17.88■□□□□ 0.45
MMP28-203ENST00000612672 FAM110AQ9BQ89 295 aa17.88■□□□□ 0.45
MMP28-203ENST00000612672 PARP12Q9H0J9 701 aaKnown RBP17.88■□□□□ 0.45
MMP28-203ENST00000612672 SPACA1Q9HBV2 294 aa17.88■□□□□ 0.45
MMP28-203ENST00000612672 ADAM30Q9UKF2 790 aa17.88■□□□□ 0.45
MMP28-203ENST00000612672 SNTNA6NMZ2 147 aa17.87■□□□□ 0.45
MMP28-203ENST00000612672 ETV1P50549 477 aa17.87■□□□□ 0.45
MMP28-203ENST00000612672 ACTBL2Q562R1 376 aa17.87■□□□□ 0.45
MMP28-203ENST00000612672 RPL39P5Q59GN2 51 aa17.87■□□□□ 0.45
MMP28-203ENST00000612672 RPL22L1Q6P5R6 122 aaKnown RBP17.87■□□□□ 0.45
MMP28-203ENST00000612672 TRAT1Q6PIZ9 186 aa17.87■□□□□ 0.45
MMP28-203ENST00000612672 PPP1R27Q86WC6 154 aa17.87■□□□□ 0.45
MMP28-203ENST00000612672 ANKRD13BQ86YJ7 626 aa17.87■□□□□ 0.45
MMP28-203ENST00000612672 TCTEX1D1Q8N7M0 179 aa17.87■□□□□ 0.45
MMP28-203ENST00000612672 RHOXF1Q8NHV9 184 aa17.87■□□□□ 0.45
MMP28-203ENST00000612672 ABHD5Q8WTS1 349 aa17.87■□□□□ 0.45
MMP28-203ENST00000612672 FLYWCH2Q96CP2 140 aaKnown RBP17.87■□□□□ 0.45
MMP28-203ENST00000612672 RAB9BQ9NP90 201 aa17.87■□□□□ 0.45
MMP28-203ENST00000612672 CNOT2Q9NZN8 540 aaKnown RBP17.87■□□□□ 0.45
MMP28-203ENST00000612672 GMPPBQ9Y5P6 360 aa17.87■□□□□ 0.45
MMP28-203ENST00000612672 TRBV5-5A0A0J9YX44 114 aa17.86■□□□□ 0.45
MMP28-203ENST00000612672 ST8SIA5O15466 376 aa17.86■□□□□ 0.45
MMP28-203ENST00000612672 YPEL1O60688 119 aa17.86■□□□□ 0.45
MMP28-203ENST00000612672 JTBO76095 146 aa17.86■□□□□ 0.45
MMP28-203ENST00000612672 MAS1P04201 325 aa17.86■□□□□ 0.45
MMP28-203ENST00000612672 CT45A6P0DMU7 189 aa17.86■□□□□ 0.45
MMP28-203ENST00000612672 CT45A5P0DMU8 189 aa17.86■□□□□ 0.45
MMP28-203ENST00000612672 CT45A7P0DMV0 189 aa17.86■□□□□ 0.45
MMP28-203ENST00000612672 RPS11P62280 158 aaKnown RBP eCLIP17.86■□□□□ 0.45
MMP28-203ENST00000612672 C6orf141Q5SZD1 244 aa17.86■□□□□ 0.45
MMP28-203ENST00000612672 UNQ5815/PRO19632Q6UWF5 114 aa17.86■□□□□ 0.45
MMP28-203ENST00000612672 LFNGQ8NES3 379 aa17.86■□□□□ 0.45
MMP28-203ENST00000612672 PYDC1Q8WXC3 89 aa17.86■□□□□ 0.45
MMP28-203ENST00000612672 MRPS24Q96EL2 167 aaKnown RBP17.86■□□□□ 0.45
MMP28-203ENST00000612672 Q96M66 194 aa17.86■□□□□ 0.45
MMP28-203ENST00000612672 RDH12Q96NR8 316 aa17.86■□□□□ 0.45
MMP28-203ENST00000612672 YPEL2Q96QA6 119 aa17.86■□□□□ 0.45
MMP28-203ENST00000612672 CLCC1Q96S66 551 aa17.86■□□□□ 0.45
MMP28-203ENST00000612672 ELOVL1Q9BW60 279 aa17.86■□□□□ 0.45
MMP28-203ENST00000612672 SELENOIQ9C0D9 397 aa17.86■□□□□ 0.45
MMP28-203ENST00000612672 MRPS18AQ9NVS2 196 aaKnown RBP17.86■□□□□ 0.45
MMP28-203ENST00000612672 IZUMO1RA6ND01 250 aa17.85■□□□□ 0.45
MMP28-203ENST00000612672 ALDH3A2P51648 485 aa17.85■□□□□ 0.45
MMP28-203ENST00000612672 HTD2P86397 168 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms