RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 EBI3Q14213 229 aa13.35□□□□□ -0.27
SSBP4-213ENST00000602088 TIMM50Q3ZCQ8 353 aa13.35□□□□□ -0.27
SSBP4-213ENST00000602088 PRR31Q5SQ13 230 aa13.35□□□□□ -0.27
SSBP4-213ENST00000602088 MOB3BQ86TA1 216 aa13.35□□□□□ -0.27
SSBP4-213ENST00000602088 KLHDC1Q8N7A1 406 aa13.35□□□□□ -0.27
SSBP4-213ENST00000602088 IL1F10Q8WWZ1 152 aa13.35□□□□□ -0.27
SSBP4-213ENST00000602088 M0QZK8 103 aa13.34□□□□□ -0.27
SSBP4-213ENST00000602088 MFNGO00587 321 aa13.34□□□□□ -0.27
SSBP4-213ENST00000602088 TXNL1O43396 289 aa13.34□□□□□ -0.27
SSBP4-213ENST00000602088 IGKV1D-33P01593 117 aa13.34□□□□□ -0.27
SSBP4-213ENST00000602088 IGKV1-33P01594 117 aa13.34□□□□□ -0.27
SSBP4-213ENST00000602088 HLA-DRB3P79483 266 aa13.34□□□□□ -0.27
SSBP4-213ENST00000602088 HES1Q14469 280 aa13.34□□□□□ -0.27
SSBP4-213ENST00000602088 TGIF2LXQ8IUE1 241 aa13.34□□□□□ -0.27
SSBP4-213ENST00000602088 LYG1Q8N1E2 194 aa13.34□□□□□ -0.27
SSBP4-213ENST00000602088 YIPF6Q96EC8 236 aa13.34□□□□□ -0.27
SSBP4-213ENST00000602088 ABHD14AQ9BUJ0 271 aa13.34□□□□□ -0.27
SSBP4-213ENST00000602088 ATG5Q9H1Y0 275 aa13.34□□□□□ -0.27
SSBP4-213ENST00000602088 IGHV3-72A0A0B4J1Y9 119 aa13.33□□□□□ -0.28
SSBP4-213ENST00000602088 LANCL1O43813 399 aa13.33□□□□□ -0.28
SSBP4-213ENST00000602088 AIREO43918 545 aa13.33□□□□□ -0.28
SSBP4-213ENST00000602088 LPLP06858 475 aa13.33□□□□□ -0.28
SSBP4-213ENST00000602088 SCTP09683 121 aa13.33□□□□□ -0.28
SSBP4-213ENST00000602088 CD3GP09693 182 aa13.33□□□□□ -0.28
SSBP4-213ENST00000602088 SNRPBP14678 240 aaKnown RBP13.33□□□□□ -0.28
SSBP4-213ENST00000602088 HIST1H1DP16402 221 aaKnown RBP13.33□□□□□ -0.28
SSBP4-213ENST00000602088 GNB3P16520 340 aa13.33□□□□□ -0.28
SSBP4-213ENST00000602088 TMEM11P17152 192 aa13.33□□□□□ -0.28
SSBP4-213ENST00000602088 CD1BP29016 333 aa13.33□□□□□ -0.28
SSBP4-213ENST00000602088 MRPS15P82914 257 aaKnown RBP13.33□□□□□ -0.28
SSBP4-213ENST00000602088 HNF4GQ14541 408 aa13.33□□□□□ -0.28
SSBP4-213ENST00000602088 HERPUD1Q15011 391 aa13.33□□□□□ -0.28
SSBP4-213ENST00000602088 ABCA11PQ4W5N1 156 aa13.33□□□□□ -0.28
SSBP4-213ENST00000602088 ARSJQ5FYB0 599 aaPredicted RBP13.33□□□□□ -0.28
SSBP4-213ENST00000602088 ODF3L1Q8IXM7 274 aa13.33□□□□□ -0.28
SSBP4-213ENST00000602088 IZUMO1Q8IYV9 350 aa13.33□□□□□ -0.28
SSBP4-213ENST00000602088 OR2AK2Q8NG84 335 aa13.33□□□□□ -0.28
SSBP4-213ENST00000602088 WNT10AQ9GZT5 417 aa13.33□□□□□ -0.28
SSBP4-213ENST00000602088 A0A075B6Q4 140 aa13.32□□□□□ -0.28
SSBP4-213ENST00000602088 SERPINE3A8MV23 424 aa13.32□□□□□ -0.28
SSBP4-213ENST00000602088 TRDCB7Z8K6 153 aa13.32□□□□□ -0.28
SSBP4-213ENST00000602088 VSIG10L2P0DP72 767 aa13.32□□□□□ -0.28
SSBP4-213ENST00000602088 SCAND1P57086 179 aa13.32□□□□□ -0.28
SSBP4-213ENST00000602088 TMEM95Q3KNT9 176 aa13.32□□□□□ -0.28
SSBP4-213ENST00000602088 OR2T10Q8NGZ9 312 aa13.32□□□□□ -0.28
SSBP4-213ENST00000602088 LGALS14Q8TCE9 139 aa13.32□□□□□ -0.28
SSBP4-213ENST00000602088 WIPF2Q8TF74 440 aaPredicted RBP13.32□□□□□ -0.28
SSBP4-213ENST00000602088 EAF1Q96JC9 268 aaPredicted RBP13.32□□□□□ -0.28
SSBP4-213ENST00000602088 MOB4Q9Y3A3 225 aa13.32□□□□□ -0.28
SSBP4-213ENST00000602088 IGKV1-6A0A0C4DH72 117 aa13.31□□□□□ -0.28
SSBP4-213ENST00000602088 ZNF736B4DX44 427 aaPredicted RBP13.31□□□□□ -0.28
SSBP4-213ENST00000602088 M0QZ24 198 aa13.31□□□□□ -0.28
SSBP4-213ENST00000602088 FCGR3AP08637 254 aa13.31□□□□□ -0.28
SSBP4-213ENST00000602088 ZBTB25P24278 435 aa13.31□□□□□ -0.28
SSBP4-213ENST00000602088 TGFBR1P36897 503 aa13.31□□□□□ -0.28
SSBP4-213ENST00000602088 CEACAM6P40199 344 aa13.31□□□□□ -0.28
SSBP4-213ENST00000602088 VDAC2P45880 294 aaPredicted RBP13.31□□□□□ -0.28
SSBP4-213ENST00000602088 ARL6IP1Q15041 203 aa13.31□□□□□ -0.28
SSBP4-213ENST00000602088 CDNFQ49AH0 187 aa13.31□□□□□ -0.28
SSBP4-213ENST00000602088 Q8N6K4 173 aa13.31□□□□□ -0.28
SSBP4-213ENST00000602088 AGMATQ9BSE5 352 aa13.31□□□□□ -0.28
SSBP4-213ENST00000602088 PARP12Q9H0J9 701 aaKnown RBP13.31□□□□□ -0.28
SSBP4-213ENST00000602088 IFI27L2Q9H2X8 130 aa13.31□□□□□ -0.28
SSBP4-213ENST00000602088 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.31□□□□□ -0.28
SSBP4-213ENST00000602088 OR1A1Q9P1Q5 309 aa13.31□□□□□ -0.28
SSBP4-213ENST00000602088 SLC23A1Q9UHI7 598 aa13.31□□□□□ -0.28
SSBP4-213ENST00000602088 SH2D7A6NKC9 451 aaPredicted RBP13.3□□□□□ -0.28
SSBP4-213ENST00000602088 ITGB1BP1O14713 200 aa13.3□□□□□ -0.28
SSBP4-213ENST00000602088 HSPA12AO43301 675 aa13.3□□□□□ -0.28
SSBP4-213ENST00000602088 FGF16O43320 207 aa13.3□□□□□ -0.28
SSBP4-213ENST00000602088 TMEM127O75204 238 aa13.3□□□□□ -0.28
SSBP4-213ENST00000602088 PEX14O75381 377 aa13.3□□□□□ -0.28
SSBP4-213ENST00000602088 SCGNO76038 276 aa13.3□□□□□ -0.28
SSBP4-213ENST00000602088 OR3A3P47888 321 aa13.3□□□□□ -0.28
SSBP4-213ENST00000602088 IDNKQ5T6J7 187 aa13.3□□□□□ -0.28
SSBP4-213ENST00000602088 ZNF833PQ6ZTB9 187 aa13.3□□□□□ -0.28
SSBP4-213ENST00000602088 C5orf56Q8N8D9 126 aa13.3□□□□□ -0.28
SSBP4-213ENST00000602088 OR4A4PQ8NGN8 299 aa13.3□□□□□ -0.28
SSBP4-213ENST00000602088 ELF5Q9UKW6 265 aaPredicted RBP13.3□□□□□ -0.28
SSBP4-213ENST00000602088 ETV7Q9Y603 341 aa13.3□□□□□ -0.28
SSBP4-213ENST00000602088 WNK1Q9H4A3 2382 aa13.3□□□□□ -0.28
SSBP4-213ENST00000602088 SAA2-SAA4A0A096LPE2 208 aa13.29□□□□□ -0.28
SSBP4-213ENST00000602088 ST8SIA5O15466 376 aa13.29□□□□□ -0.28
SSBP4-213ENST00000602088 MOSP00540 346 aa13.29□□□□□ -0.28
SSBP4-213ENST00000602088 SAA2P0DJI9 122 aaPredicted RBP13.29□□□□□ -0.28
SSBP4-213ENST00000602088 RPS19P39019 145 aaKnown RBP13.29□□□□□ -0.28
SSBP4-213ENST00000602088 LSM3P62310 102 aaKnown RBP13.29□□□□□ -0.28
SSBP4-213ENST00000602088 LSAMPQ13449 338 aa13.29□□□□□ -0.28
SSBP4-213ENST00000602088 ARFRP1Q13795 201 aa13.29□□□□□ -0.28
SSBP4-213ENST00000602088 KIR2DS1Q14954 304 aa13.29□□□□□ -0.28
SSBP4-213ENST00000602088 C11orf44Q8N8P7 122 aa13.29□□□□□ -0.28
SSBP4-213ENST00000602088 OR5H6Q8NGV6 325 aa13.29□□□□□ -0.28
SSBP4-213ENST00000602088 EDARADDQ8WWZ3 215 aa13.29□□□□□ -0.28
SSBP4-213ENST00000602088 NABP2Q9BQ15 211 aa13.29□□□□□ -0.28
SSBP4-213ENST00000602088 ZNF251Q9BRH9 671 aa13.29□□□□□ -0.28
SSBP4-213ENST00000602088 FUNDC2Q9BWH2 189 aa13.29□□□□□ -0.28
SSBP4-213ENST00000602088 C11orf54Q9H0W9 315 aaPredicted RBP13.29□□□□□ -0.28
SSBP4-213ENST00000602088 GHITMQ9H3K2 345 aa13.29□□□□□ -0.28
SSBP4-213ENST00000602088 PLSCR3Q9NRY6 295 aa13.29□□□□□ -0.28
SSBP4-213ENST00000602088 RHBDL2Q9NX52 303 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms