RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 RNF170Q96K19 258 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 TBX15Q96SF7 602 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 CNN2Q99439 309 aaKnown RBP2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 CIB1Q99828 191 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 SLC6A7Q99884 636 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 FGF23Q9GZV9 251 aaPredicted RBP2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 PBOV1Q9GZY1 135 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 SIRPDQ9H106 197 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 SLITRK2Q9H156 845 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 OR51I2Q9H344 312 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 ADGRL4Q9HBW9 690 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 FAM212BQ9NTI7 297 aaPredicted RBP2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 CLN6Q9NWW5 311 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 RASL12Q9NYN1 266 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 USE1Q9NZ43 259 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 WARS2Q9UGM6 360 aaKnown RBP2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 MRM2Q9UI43 246 aaKnown RBP2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 RPUSD1Q9UJJ7 312 aaKnown RBP2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 ZNF222Q9UK12 451 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 TP53TG3Q9ULZ0 132 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 MGAT4AQ9UM21 535 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 COPS3Q9UNS2 423 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 KPTNQ9Y664 436 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 V9GYS6 101 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 IGHV1-69DA0A0B4J2H0 117 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 IGHV3-64DA0A0J9YX35 117 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 TEX48A0A1B0GUV7 120 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 A0A1B0GVI7 797 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 PQLC2LA1A4F0 135 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 OR2AT4A6NND4 320 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 ZNF850A8MQ14 1090 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 LOC110117498-PIK3R3F6TDL0 507 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 J3QRE1 110 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 M0R1W7 72 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 CDIPTO14735 213 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 NDUFB3O43676 98 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 CIB2O75838 187 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 NDUFA7O95182 113 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 NRASP01111 189 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 IGHV1-69P01742 117 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 GYPAP02724 150 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 ISG15P05161 165 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 RPSAP08865 295 aaKnown RBP2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 PGA5P0DJD9 388 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 PSG2P11465 335 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 GLRA1P23415 457 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 POLR2IP36954 125 aaKnown RBP2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 ID1P41134 155 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 CXCR4P61073 352 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 FGF12P61328 243 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 SNRPGP62308 76 aaKnown RBP2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 ACTG1P63261 375 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 ACTC1P68032 377 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 ACTA1P68133 377 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 MFGE8Q08431 387 aaPredicted RBP2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 BAMBIQ13145 260 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 SPHARQ15513 63 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 SLC9A3R2Q15599 337 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 LRRC10Q5BKY1 277 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 CLVS2Q5SYC1 327 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 METTL11BQ5VVY1 283 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 MEDAGQ5VYS4 303 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 C16orf87Q6PH81 154 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 ACP7Q6ZNF0 438 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 PLEKHG7Q6ZR37 379 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 SH2D6Q7Z4S9 175 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 ZNF573Q86YE8 665 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 CALHM1Q8IU99 346 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 LAX1Q8IWV1 398 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 SLC35F2Q8IXU6 374 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 ZNF561Q8N587 486 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 Q8N7P7 452 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 C19orf18Q8NEA5 215 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 OR51G2Q8NGK0 314 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 SGMS2Q8NHU3 365 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 FAM81AQ8TBF8 368 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 OR51E1Q8TCB6 317 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 C22orf15Q8WYQ4 148 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 AQP3Q92482 292 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 PIGCQ92535 297 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 GGHQ92820 318 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 RPL3LQ92901 407 aaKnown RBP2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 TNFRSF14Q92956 283 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 TMIGD2Q96BF3 282 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 SDSLQ96GA7 329 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 IL4I1Q96RQ9 567 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 MYCBPQ99417 103 aaPredicted RBP2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 CCL13Q99616 98 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 PKIBQ9C010 78 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 HES4Q9HCC6 221 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 GPR84Q9NQS5 396 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 ACOXLQ9NUZ1 547 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 PSORS1C1Q9UIG5 152 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 ZNF107Q9UII5 783 aaPredicted RBP2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 ENPP5Q9UJA9 477 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 OR52A1Q9UKL2 312 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 IKZF2Q9UKS7 526 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 SLC22A13Q9Y226 551 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 POLDIP2Q9Y2S7 368 aa2.72□□□□□ -1.97
CKS1BP3-201ENST00000600888 CAB39Q9Y376 341 aaPredicted RBP2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms