RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 RIMS4Q9H426 269 aaPredicted RBP14.67□□□□□ -0.06
SHKBP1-202ENST00000593764 RAB22AQ9UL26 194 aa14.67□□□□□ -0.06
SHKBP1-202ENST00000593764 LANCL1O43813 399 aa14.66□□□□□ -0.06
SHKBP1-202ENST00000593764 RAB3BP20337 219 aa14.66□□□□□ -0.06
SHKBP1-202ENST00000593764 MYL9P24844 172 aa14.66□□□□□ -0.06
SHKBP1-202ENST00000593764 FGF9P31371 208 aaPredicted RBP14.66□□□□□ -0.06
SHKBP1-202ENST00000593764 CD83Q01151 205 aa14.66□□□□□ -0.06
SHKBP1-202ENST00000593764 NSUN5P1Q3KNT7 163 aa14.66□□□□□ -0.06
SHKBP1-202ENST00000593764 C9orf152Q5JTZ5 239 aa14.66□□□□□ -0.06
SHKBP1-202ENST00000593764 C10orf99Q6UWK7 81 aa14.66□□□□□ -0.06
SHKBP1-202ENST00000593764 CENPVQ7Z7K6 275 aaPredicted RBP14.66□□□□□ -0.06
SHKBP1-202ENST00000593764 NDUFA11Q86Y39 141 aa14.66□□□□□ -0.06
SHKBP1-202ENST00000593764 TGIF2LXQ8IUE1 241 aa14.66□□□□□ -0.06
SHKBP1-202ENST00000593764 ABHD14AQ9BUJ0 271 aa14.66□□□□□ -0.06
SHKBP1-202ENST00000593764 CHMP1AQ9HD42 196 aaPredicted RBP14.66□□□□□ -0.06
SHKBP1-202ENST00000593764 PLSCR3Q9NRY6 295 aa14.66□□□□□ -0.06
SHKBP1-202ENST00000593764 TXNL4BQ9NX01 149 aaKnown RBP14.66□□□□□ -0.06
SHKBP1-202ENST00000593764 KCNK7Q9Y2U2 307 aa14.66□□□□□ -0.06
SHKBP1-202ENST00000593764 A0A0B4J203 849 aa14.65□□□□□ -0.06
SHKBP1-202ENST00000593764 RANBP1P43487 201 aa14.65□□□□□ -0.06
SHKBP1-202ENST00000593764 MOB1BQ7L9L4 216 aa14.65□□□□□ -0.06
SHKBP1-202ENST00000593764 OR56B1Q8NGI3 324 aa14.65□□□□□ -0.06
SHKBP1-202ENST00000593764 OR2T10Q8NGZ9 312 aa14.65□□□□□ -0.06
SHKBP1-202ENST00000593764 IL1F10Q8WWZ1 152 aa14.65□□□□□ -0.06
SHKBP1-202ENST00000593764 ABRACLQ9P1F3 81 aa14.65□□□□□ -0.06
SHKBP1-202ENST00000593764 NOTCH3Q9UM47 2321 aa14.64□□□□□ -0.07
SHKBP1-202ENST00000593764 TXNL1O43396 289 aa14.64□□□□□ -0.07
SHKBP1-202ENST00000593764 RGS11O94810 467 aa14.64□□□□□ -0.07
SHKBP1-202ENST00000593764 MOSP00540 346 aa14.64□□□□□ -0.07
SHKBP1-202ENST00000593764 OPN1MWP04001 364 aa14.64□□□□□ -0.07
SHKBP1-202ENST00000593764 OPN1MW2P0DN77 364 aa14.64□□□□□ -0.07
SHKBP1-202ENST00000593764 OPN1MW3P0DN78 364 aa14.64□□□□□ -0.07
SHKBP1-202ENST00000593764 MOGAT2Q3SYC2 334 aa14.64□□□□□ -0.07
SHKBP1-202ENST00000593764 SETD6Q8TBK2 473 aa14.64□□□□□ -0.07
SHKBP1-202ENST00000593764 Q9N2K0 584 aa14.64□□□□□ -0.07
SHKBP1-202ENST00000593764 STUB1Q9UNE7 303 aa14.64□□□□□ -0.07
SHKBP1-202ENST00000593764 KCNAB3O43448 404 aa14.63□□□□□ -0.07
SHKBP1-202ENST00000593764 IGHG2P01859 326 aa14.63□□□□□ -0.07
SHKBP1-202ENST00000593764 KCTD21Q4G0X4 260 aa14.63□□□□□ -0.07
SHKBP1-202ENST00000593764 Q8N9W7 124 aa14.63□□□□□ -0.07
SHKBP1-202ENST00000593764 CMSS1Q9BQ75 279 aaKnown RBP14.63□□□□□ -0.07
SHKBP1-202ENST00000593764 PARP12Q9H0J9 701 aaKnown RBP14.63□□□□□ -0.07
SHKBP1-202ENST00000593764 OR51E2Q9H255 320 aa14.63□□□□□ -0.07
SHKBP1-202ENST00000593764 C12orf4Q9NQ89 552 aa14.63□□□□□ -0.07
SHKBP1-202ENST00000593764 SMIM30A4D0T7 59 aa14.62□□□□□ -0.07
SHKBP1-202ENST00000593764 LINC01548A6NM66 108 aa14.62□□□□□ -0.07
SHKBP1-202ENST00000593764 NCBP2LA6PVI3 153 aaKnown RBP14.62□□□□□ -0.07
SHKBP1-202ENST00000593764 RAB27BO00194 218 aa14.62□□□□□ -0.07
SHKBP1-202ENST00000593764 WIPF1O43516 503 aa14.62□□□□□ -0.07
SHKBP1-202ENST00000593764 SCTP09683 121 aa14.62□□□□□ -0.07
SHKBP1-202ENST00000593764 SLC2A2P11168 524 aaPredicted RBP14.62□□□□□ -0.07
SHKBP1-202ENST00000593764 RAB6AP20340 208 aa14.62□□□□□ -0.07
SHKBP1-202ENST00000593764 OR3A3P47888 321 aa14.62□□□□□ -0.07
SHKBP1-202ENST00000593764 F2RL1P55085 397 aa14.62□□□□□ -0.07
SHKBP1-202ENST00000593764 HLA-DRB3P79483 266 aa14.62□□□□□ -0.07
SHKBP1-202ENST00000593764 DEFA6Q01524 100 aa14.62□□□□□ -0.07
SHKBP1-202ENST00000593764 LSAMPQ13449 338 aa14.62□□□□□ -0.07
SHKBP1-202ENST00000593764 ZNF833PQ6ZTB9 187 aa14.62□□□□□ -0.07
SHKBP1-202ENST00000593764 OR2AK2Q8NG84 335 aa14.62□□□□□ -0.07
SHKBP1-202ENST00000593764 RAB3CQ96E17 227 aa14.62□□□□□ -0.07
SHKBP1-202ENST00000593764 NOL4LQ96MY1 436 aaPredicted RBP14.62□□□□□ -0.07
SHKBP1-202ENST00000593764 MRPL20Q9BYC9 149 aaKnown RBP14.62□□□□□ -0.07
SHKBP1-202ENST00000593764 IFI27L2Q9H2X8 130 aa14.62□□□□□ -0.07
SHKBP1-202ENST00000593764 SAA2-SAA4A0A096LPE2 208 aa14.61□□□□□ -0.07
SHKBP1-202ENST00000593764 ST8SIA5O15466 376 aa14.61□□□□□ -0.07
SHKBP1-202ENST00000593764 PLXNB1O43157 2135 aa14.61□□□□□ -0.07
SHKBP1-202ENST00000593764 SAA2P0DJI9 122 aaPredicted RBP14.61□□□□□ -0.07
SHKBP1-202ENST00000593764 OR10R2Q8NGX6 335 aa14.61□□□□□ -0.07
SHKBP1-202ENST00000593764 PTX4Q96A99 478 aa14.61□□□□□ -0.07
SHKBP1-202ENST00000593764 S1PR3Q99500 378 aa14.61□□□□□ -0.07
SHKBP1-202ENST00000593764 NABP2Q9BQ15 211 aa14.61□□□□□ -0.07
SHKBP1-202ENST00000593764 ZNF251Q9BRH9 671 aa14.61□□□□□ -0.07
SHKBP1-202ENST00000593764 AGMATQ9BSE5 352 aa14.61□□□□□ -0.07
SHKBP1-202ENST00000593764 ABCG5Q9H222 651 aa14.61□□□□□ -0.07
SHKBP1-202ENST00000593764 OR1A1Q9P1Q5 309 aa14.61□□□□□ -0.07
SHKBP1-202ENST00000593764 SLC23A1Q9UHI7 598 aa14.61□□□□□ -0.07
SHKBP1-202ENST00000593764 MGAT4AQ9UM21 535 aa14.61□□□□□ -0.07
SHKBP1-202ENST00000593764 SSR3Q9UNL2 185 aa14.61□□□□□ -0.07
SHKBP1-202ENST00000593764 IGKV1-6A0A0C4DH72 117 aa14.6□□□□□ -0.07
SHKBP1-202ENST00000593764 NOTOA8MTQ0 251 aa14.6□□□□□ -0.07
SHKBP1-202ENST00000593764 ITGB1BP1O14713 200 aa14.6□□□□□ -0.07
SHKBP1-202ENST00000593764 GNB3P16520 340 aa14.6□□□□□ -0.07
SHKBP1-202ENST00000593764 NEDD8Q15843 81 aa14.6□□□□□ -0.07
SHKBP1-202ENST00000593764 ZNF329Q86UD4 541 aa14.6□□□□□ -0.07
SHKBP1-202ENST00000593764 TPRA1Q86W33 373 aa14.6□□□□□ -0.07
SHKBP1-202ENST00000593764 FAM71E2Q8N5Q1 922 aa14.6□□□□□ -0.07
SHKBP1-202ENST00000593764 OR8H1Q8NGG4 311 aa14.6□□□□□ -0.07
SHKBP1-202ENST00000593764 R3HDM4Q96D70 268 aa14.6□□□□□ -0.07
SHKBP1-202ENST00000593764 RITA1Q96K30 269 aa14.6□□□□□ -0.07
SHKBP1-202ENST00000593764 LIN7CQ9NUP9 197 aaKnown RBP14.6□□□□□ -0.07
SHKBP1-202ENST00000593764 LINC00527Q9UJ94 153 aa14.6□□□□□ -0.07
SHKBP1-202ENST00000593764 A0A1W2PRX2 142 aa14.59□□□□□ -0.07
SHKBP1-202ENST00000593764 TCRBV4S1A1TA0A5B7 111 aa14.59□□□□□ -0.07
SHKBP1-202ENST00000593764 PSMB11A5LHX3 300 aa14.59□□□□□ -0.07
SHKBP1-202ENST00000593764 TRDCB7Z8K6 153 aa14.59□□□□□ -0.07
SHKBP1-202ENST00000593764 MFNGO00587 321 aa14.59□□□□□ -0.07
SHKBP1-202ENST00000593764 ZBTB25P24278 435 aa14.59□□□□□ -0.07
SHKBP1-202ENST00000593764 CEACAM6P40199 344 aa14.59□□□□□ -0.07
SHKBP1-202ENST00000593764 SLC35E3Q7Z769 313 aa14.59□□□□□ -0.07
SHKBP1-202ENST00000593764 OR4X2Q8NGF9 303 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 175.7 ms