RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 CD37P11049 281 aa13.48□□□□□ -0.25
RETREG3-210ENST00000590541 PSMA1P25786 263 aaKnown RBP13.48□□□□□ -0.25
RETREG3-210ENST00000590541 HSD17B12Q53GQ0 312 aa13.48□□□□□ -0.25
RETREG3-210ENST00000590541 RBM48Q5RL73 367 aaKnown RBP13.48□□□□□ -0.25
RETREG3-210ENST00000590541 C1orf100Q5SVJ3 147 aa13.48□□□□□ -0.25
RETREG3-210ENST00000590541 ASPHD1Q5U4P2 390 aa13.48□□□□□ -0.25
RETREG3-210ENST00000590541 TGIF2LXQ8IUE1 241 aa13.48□□□□□ -0.25
RETREG3-210ENST00000590541 TMEM104Q8NE00 496 aa13.48□□□□□ -0.25
RETREG3-210ENST00000590541 KCNG3Q8TAE7 436 aa13.48□□□□□ -0.25
RETREG3-210ENST00000590541 TMED9Q9BVK6 235 aa13.48□□□□□ -0.25
RETREG3-210ENST00000590541 LIN7CQ9NUP9 197 aaKnown RBP13.48□□□□□ -0.25
RETREG3-210ENST00000590541 KCNIP1Q9NZI2 227 aa13.48□□□□□ -0.25
RETREG3-210ENST00000590541 SORL1Q92673 2214 aa13.47□□□□□ -0.25
RETREG3-210ENST00000590541 IGHV1-3A0A0C4DH29 117 aa13.47□□□□□ -0.25
RETREG3-210ENST00000590541 C12orf77C9JDV5 145 aa13.47□□□□□ -0.25
RETREG3-210ENST00000590541 RGS10O43665 173 aa13.47□□□□□ -0.25
RETREG3-210ENST00000590541 IGHG4P01861 327 aa13.47□□□□□ -0.25
RETREG3-210ENST00000590541 UCHL1P09936 223 aa13.47□□□□□ -0.25
RETREG3-210ENST00000590541 ZNF137PP52743 207 aa13.47□□□□□ -0.25
RETREG3-210ENST00000590541 FAM27D1Q5T7N8 215 aa13.47□□□□□ -0.25
RETREG3-210ENST00000590541 CEACAM19Q7Z692 300 aa13.47□□□□□ -0.25
RETREG3-210ENST00000590541 Q8N6K4 173 aa13.47□□□□□ -0.25
RETREG3-210ENST00000590541 Q8N9W7 124 aa13.47□□□□□ -0.25
RETREG3-210ENST00000590541 EAF1Q96JC9 268 aaPredicted RBP13.47□□□□□ -0.25
RETREG3-210ENST00000590541 NEDD4LQ96PU5 975 aa13.47□□□□□ -0.25
RETREG3-210ENST00000590541 TM2D3Q9BRN9 247 aa13.47□□□□□ -0.25
RETREG3-210ENST00000590541 MBNL3Q9NUK0 354 aaKnown RBP13.47□□□□□ -0.25
RETREG3-210ENST00000590541 GNG12Q9UBI6 72 aa13.47□□□□□ -0.25
RETREG3-210ENST00000590541 NCBP2LA6PVI3 153 aaKnown RBP13.46□□□□□ -0.25
RETREG3-210ENST00000590541 ARL6IP5O75915 188 aa13.46□□□□□ -0.25
RETREG3-210ENST00000590541 BPNT1O95861 308 aa13.46□□□□□ -0.25
RETREG3-210ENST00000590541 PSMB8P28062 276 aa13.46□□□□□ -0.25
RETREG3-210ENST00000590541 CD1BP29016 333 aa13.46□□□□□ -0.25
RETREG3-210ENST00000590541 TPBGQ13641 420 aa13.46□□□□□ -0.25
RETREG3-210ENST00000590541 SIGIRRQ6IA17 410 aa13.46□□□□□ -0.25
RETREG3-210ENST00000590541 SLC25A48Q6ZT89 311 aaKnown RBP13.46□□□□□ -0.25
RETREG3-210ENST00000590541 PRSS48Q7RTY5 328 aa13.46□□□□□ -0.25
RETREG3-210ENST00000590541 LRRTM1Q86UE6 522 aa13.46□□□□□ -0.25
RETREG3-210ENST00000590541 ZNF429Q86V71 674 aa13.46□□□□□ -0.25
RETREG3-210ENST00000590541 IZUMO1Q8IYV9 350 aa13.46□□□□□ -0.25
RETREG3-210ENST00000590541 OR4K15Q8NH41 348 aa13.46□□□□□ -0.25
RETREG3-210ENST00000590541 MYOZ3Q8TDC0 251 aa13.46□□□□□ -0.25
RETREG3-210ENST00000590541 ST6GALNAC6Q969X2 333 aa13.46□□□□□ -0.25
RETREG3-210ENST00000590541 ISOC1Q96CN7 298 aa13.46□□□□□ -0.25
RETREG3-210ENST00000590541 PLECQ15149 4684 aaKnown RBP13.45□□□□□ -0.26
RETREG3-210ENST00000590541 IGHV3-72A0A0B4J1Y9 119 aa13.45□□□□□ -0.26
RETREG3-210ENST00000590541 A0A1W2PPE3 182 aa13.45□□□□□ -0.26
RETREG3-210ENST00000590541 TRIM64CA6NLI5 447 aa13.45□□□□□ -0.26
RETREG3-210ENST00000590541 SLC22A1O15245 554 aa13.45□□□□□ -0.26
RETREG3-210ENST00000590541 HBZP02008 142 aa13.45□□□□□ -0.26
RETREG3-210ENST00000590541 SPNP16150 400 aa13.45□□□□□ -0.26
RETREG3-210ENST00000590541 HTR2CP28335 458 aa13.45□□□□□ -0.26
RETREG3-210ENST00000590541 RPS27AP62979 156 aaKnown RBP13.45□□□□□ -0.26
RETREG3-210ENST00000590541 MLLT11Q13015 90 aaPredicted RBP13.45□□□□□ -0.26
RETREG3-210ENST00000590541 INSL4Q14641 139 aa13.45□□□□□ -0.26
RETREG3-210ENST00000590541 LIPKQ5VXJ0 399 aa13.45□□□□□ -0.26
RETREG3-210ENST00000590541 MOB3BQ86TA1 216 aa13.45□□□□□ -0.26
RETREG3-210ENST00000590541 OR6M1Q8NGM8 313 aa13.45□□□□□ -0.26
RETREG3-210ENST00000590541 OR2T10Q8NGZ9 312 aa13.45□□□□□ -0.26
RETREG3-210ENST00000590541 RTN4IP1Q8WWV3 396 aaPredicted RBP13.45□□□□□ -0.26
RETREG3-210ENST00000590541 FAM46BQ96A09 425 aa13.45□□□□□ -0.26
RETREG3-210ENST00000590541 TMEM59Q9BXS4 323 aa13.45□□□□□ -0.26
RETREG3-210ENST00000590541 PLSCR3Q9NRY6 295 aa13.45□□□□□ -0.26
RETREG3-210ENST00000590541 BLOC1S6Q9UL45 172 aa13.45□□□□□ -0.26
RETREG3-210ENST00000590541 UBE2QL1A1L167 161 aa13.44□□□□□ -0.26
RETREG3-210ENST00000590541 I3L521 148 aa13.44□□□□□ -0.26
RETREG3-210ENST00000590541 RRP9O43818 475 aaKnown RBP13.44□□□□□ -0.26
RETREG3-210ENST00000590541 RGS11O94810 467 aa13.44□□□□□ -0.26
RETREG3-210ENST00000590541 OR8U8P0C7N1 319 aa13.44□□□□□ -0.26
RETREG3-210ENST00000590541 GP9P14770 177 aa13.44□□□□□ -0.26
RETREG3-210ENST00000590541 CPEP16870 476 aa13.44□□□□□ -0.26
RETREG3-210ENST00000590541 RCC1P18754 421 aaPredicted RBP13.44□□□□□ -0.26
RETREG3-210ENST00000590541 CRHBPP24387 322 aa13.44□□□□□ -0.26
RETREG3-210ENST00000590541 HTD2P86397 168 aa13.44□□□□□ -0.26
RETREG3-210ENST00000590541 KIAA0141Q14154 515 aaPredicted RBP13.44□□□□□ -0.26
RETREG3-210ENST00000590541 LY6G6FQ5SQ64 297 aa13.44□□□□□ -0.26
RETREG3-210ENST00000590541 ZNF439Q8NDP4 499 aa13.44□□□□□ -0.26
RETREG3-210ENST00000590541 OR8H1Q8NGG4 311 aa13.44□□□□□ -0.26
RETREG3-210ENST00000590541 OR1N2Q8NGR9 330 aa13.44□□□□□ -0.26
RETREG3-210ENST00000590541 HSPB9Q9BQS6 159 aa13.44□□□□□ -0.26
RETREG3-210ENST00000590541 TM2D1Q9BX74 207 aa13.44□□□□□ -0.26
RETREG3-210ENST00000590541 GNB4Q9HAV0 340 aa13.44□□□□□ -0.26
RETREG3-210ENST00000590541 TAF9BQ9HBM6 251 aa13.44□□□□□ -0.26
RETREG3-210ENST00000590541 OR2S2Q9NQN1 319 aa13.44□□□□□ -0.26
RETREG3-210ENST00000590541 JPT1Q9UK76 154 aa13.44□□□□□ -0.26
RETREG3-210ENST00000590541 IGHV3-43A0A0B4J1X8 118 aa13.43□□□□□ -0.26
RETREG3-210ENST00000590541 HSMCR30P0CW71 290 aa13.43□□□□□ -0.26
RETREG3-210ENST00000590541 IGHV3-43DP0DP04 118 aa13.43□□□□□ -0.26
RETREG3-210ENST00000590541 VDAC1P21796 283 aa13.43□□□□□ -0.26
RETREG3-210ENST00000590541 VHLP40337 213 aa13.43□□□□□ -0.26
RETREG3-210ENST00000590541 VEGFCP49767 419 aa13.43□□□□□ -0.26
RETREG3-210ENST00000590541 PSMD7P51665 324 aa13.43□□□□□ -0.26
RETREG3-210ENST00000590541 FAM53AQ6NSI3 398 aaPredicted RBP13.43□□□□□ -0.26
RETREG3-210ENST00000590541 PRR18Q8N4B5 295 aa13.43□□□□□ -0.26
RETREG3-210ENST00000590541 OR1L1Q8NH94 360 aa13.43□□□□□ -0.26
RETREG3-210ENST00000590541 MRPL30Q8TCC3 161 aaKnown RBP13.43□□□□□ -0.26
RETREG3-210ENST00000590541 DCUN1D4Q92564 292 aa13.43□□□□□ -0.26
RETREG3-210ENST00000590541 GALMQ96C23 342 aa13.43□□□□□ -0.26
RETREG3-210ENST00000590541 KCTD7Q96MP8 289 aa13.43□□□□□ -0.26
RETREG3-210ENST00000590541 URM1Q9BTM9 101 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms