RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 OR8U9P0C7N5 309 aa8.7□□□□□ -1.02
VPS25-203ENST00000589520 ARHGDIBP52566 201 aa8.7□□□□□ -1.02
VPS25-203ENST00000589520 VAMP2P63027 116 aa8.7□□□□□ -1.02
VPS25-203ENST00000589520 AANATQ16613 207 aa8.7□□□□□ -1.02
VPS25-203ENST00000589520 TEX36Q5VZQ5 186 aa8.7□□□□□ -1.02
VPS25-203ENST00000589520 C1orf87Q8N0U7 546 aa8.7□□□□□ -1.02
VPS25-203ENST00000589520 PRR18Q8N4B5 295 aa8.7□□□□□ -1.02
VPS25-203ENST00000589520 UBAC2Q8NBM4 344 aa8.7□□□□□ -1.02
VPS25-203ENST00000589520 OR8U1Q8NH10 309 aa8.7□□□□□ -1.02
VPS25-203ENST00000589520 CD300LFQ8TDQ1 290 aa8.7□□□□□ -1.02
VPS25-203ENST00000589520 SAT2Q96F10 170 aaPredicted RBP8.7□□□□□ -1.02
VPS25-203ENST00000589520 YPEL2Q96QA6 119 aa8.7□□□□□ -1.02
VPS25-203ENST00000589520 MS4A5Q9H3V2 200 aa8.7□□□□□ -1.02
VPS25-203ENST00000589520 ZNF665Q9H7R5 613 aa8.7□□□□□ -1.02
VPS25-203ENST00000589520 GCM1Q9NP62 436 aa8.7□□□□□ -1.02
VPS25-203ENST00000589520 OR2S2Q9NQN1 319 aa8.7□□□□□ -1.02
VPS25-203ENST00000589520 COA4Q9NYJ1 87 aa8.7□□□□□ -1.02
VPS25-203ENST00000589520 OR1A1Q9P1Q5 309 aa8.7□□□□□ -1.02
VPS25-203ENST00000589520 CACFD1Q9UGQ2 172 aa8.7□□□□□ -1.02
VPS25-203ENST00000589520 URB1O60287 2271 aaKnown RBP8.7□□□□□ -1.02
VPS25-203ENST00000589520 DOPEY1Q5JWR5 2465 aa8.7□□□□□ -1.02
VPS25-203ENST00000589520 SPTA1P02549 2419 aa8.69□□□□□ -1.02
VPS25-203ENST00000589520 IGKV1D-17A0A075B6S4 117 aa8.69□□□□□ -1.02
VPS25-203ENST00000589520 IGHV3-64DA0A0J9YX35 117 aa8.69□□□□□ -1.02
VPS25-203ENST00000589520 ODAMA1E959 279 aa8.69□□□□□ -1.02
VPS25-203ENST00000589520 NKX2-6A6NCS4 301 aa8.69□□□□□ -1.02
VPS25-203ENST00000589520 MFSD2BA6NFX1 497 aa8.69□□□□□ -1.02
VPS25-203ENST00000589520 C17orf100A8MU93 164 aa8.69□□□□□ -1.02
VPS25-203ENST00000589520 FAM90A26D6RGX4 464 aa8.69□□□□□ -1.02
VPS25-203ENST00000589520 WRBO00258 174 aa8.69□□□□□ -1.02
VPS25-203ENST00000589520 ADAM20O43506 726 aa8.69□□□□□ -1.02
VPS25-203ENST00000589520 PITX3O75364 302 aa8.69□□□□□ -1.02
VPS25-203ENST00000589520 LY86O95711 162 aa8.69□□□□□ -1.02
VPS25-203ENST00000589520 IGLV2-14P01704 120 aa8.69□□□□□ -1.02
VPS25-203ENST00000589520 THBDP07204 575 aa8.69□□□□□ -1.02
VPS25-203ENST00000589520 OR4A8P0C604 315 aa8.69□□□□□ -1.02
VPS25-203ENST00000589520 PLA2G2AP14555 144 aa8.69□□□□□ -1.02
VPS25-203ENST00000589520 CHRNB4P30926 498 aa8.69□□□□□ -1.02
VPS25-203ENST00000589520 P2RX3P56373 397 aa8.69□□□□□ -1.02
VPS25-203ENST00000589520 TMEM33P57088 247 aa8.69□□□□□ -1.02
VPS25-203ENST00000589520 BLOC1S1P78537 153 aa8.69□□□□□ -1.02
VPS25-203ENST00000589520 BAXQ07812 192 aa8.69□□□□□ -1.02
VPS25-203ENST00000589520 NCMAPQ5T1S8 102 aa8.69□□□□□ -1.02
VPS25-203ENST00000589520 UQCC3Q6UW78 93 aa8.69□□□□□ -1.02
VPS25-203ENST00000589520 FOXRED2Q8IWF2 684 aa8.69□□□□□ -1.02
VPS25-203ENST00000589520 OR2C3Q8N628 320 aa8.69□□□□□ -1.02
VPS25-203ENST00000589520 DRAM1Q8N682 238 aa8.69□□□□□ -1.02
VPS25-203ENST00000589520 OR52M1Q8NGK5 317 aa8.69□□□□□ -1.02
VPS25-203ENST00000589520 OR1L1Q8NH94 360 aa8.69□□□□□ -1.02
VPS25-203ENST00000589520 MRGPRDQ8TDS7 321 aa8.69□□□□□ -1.02
VPS25-203ENST00000589520 ARL11Q969Q4 196 aa8.69□□□□□ -1.02
VPS25-203ENST00000589520 C14orf79Q96F83 325 aa8.69□□□□□ -1.02
VPS25-203ENST00000589520 RAB40CQ96S21 281 aa8.69□□□□□ -1.02
VPS25-203ENST00000589520 HSD17B10Q99714 261 aaKnown RBP8.69□□□□□ -1.02
VPS25-203ENST00000589520 SDHAF2Q9NX18 166 aa8.69□□□□□ -1.02
VPS25-203ENST00000589520 COQ3Q9NZJ6 369 aa8.69□□□□□ -1.02
VPS25-203ENST00000589520 KCNS2Q9ULS6 477 aa8.69□□□□□ -1.02
VPS25-203ENST00000589520 TRAV38-1A0A0B4J264 116 aa8.68□□□□□ -1.02
VPS25-203ENST00000589520 RAB19A4D1S5 217 aa8.68□□□□□ -1.02
VPS25-203ENST00000589520 MSGN1A6NI15 193 aa8.68□□□□□ -1.02
VPS25-203ENST00000589520 C15orf65H3BRN8 121 aa8.68□□□□□ -1.02
VPS25-203ENST00000589520 TEX46H3BTG2 121 aa8.68□□□□□ -1.02
VPS25-203ENST00000589520 F2RL2O00254 374 aa8.68□□□□□ -1.02
VPS25-203ENST00000589520 SHOXO15266 292 aa8.68□□□□□ -1.02
VPS25-203ENST00000589520 FGF2P09038 288 aa8.68□□□□□ -1.02
VPS25-203ENST00000589520 SEC11BP0C7V7 166 aa8.68□□□□□ -1.02
VPS25-203ENST00000589520 EGR1P18146 543 aa8.68□□□□□ -1.02
VPS25-203ENST00000589520 GLIPR1P48060 266 aa8.68□□□□□ -1.02
VPS25-203ENST00000589520 CEBPDP49716 269 aaPredicted RBP8.68□□□□□ -1.02
VPS25-203ENST00000589520 RAB5CP51148 216 aa8.68□□□□□ -1.02
VPS25-203ENST00000589520 RAB7AP51149 207 aa8.68□□□□□ -1.02
VPS25-203ENST00000589520 RPL23AP62750 156 aaKnown RBP8.68□□□□□ -1.02
VPS25-203ENST00000589520 BSPH1Q075Z2 132 aa8.68□□□□□ -1.02
VPS25-203ENST00000589520 ZNF266Q14584 549 aa8.68□□□□□ -1.02
VPS25-203ENST00000589520 EFNB3Q15768 340 aa8.68□□□□□ -1.02
VPS25-203ENST00000589520 ADIPOQQ15848 244 aa8.68□□□□□ -1.02
VPS25-203ENST00000589520 C22orf34Q6ZV56 151 aa8.68□□□□□ -1.02
VPS25-203ENST00000589520 DMBX1Q8NFW5 382 aa8.68□□□□□ -1.02
VPS25-203ENST00000589520 OR10A7Q8NGE5 316 aa8.68□□□□□ -1.02
VPS25-203ENST00000589520 OR13A1Q8NGR1 328 aa8.68□□□□□ -1.02
VPS25-203ENST00000589520 RNASE11Q8TAA1 199 aaKnown RBP8.68□□□□□ -1.02
VPS25-203ENST00000589520 CORO2AQ92828 525 aa8.68□□□□□ -1.02
VPS25-203ENST00000589520 RNASE6Q93091 150 aaKnown RBP8.68□□□□□ -1.02
VPS25-203ENST00000589520 ARV1Q9H2C2 271 aa8.68□□□□□ -1.02
VPS25-203ENST00000589520 C11orf1Q9H5F2 150 aa8.68□□□□□ -1.02
VPS25-203ENST00000589520 LYRM2Q9NU23 88 aaPredicted RBP8.68□□□□□ -1.02
VPS25-203ENST00000589520 SH3BGRL2Q9UJC5 107 aa8.68□□□□□ -1.02
VPS25-203ENST00000589520 PPP1R3CQ9UQK1 317 aa8.68□□□□□ -1.02
VPS25-203ENST00000589520 RCL1Q9Y2P8 373 aaKnown RBP8.68□□□□□ -1.02
VPS25-203ENST00000589520 SHANK1Q9Y566 2161 aa8.68□□□□□ -1.02
VPS25-203ENST00000589520 TRAV39A0A0B4J263 110 aa8.67□□□□□ -1.02
VPS25-203ENST00000589520 NKX6-3A6NJ46 265 aa8.67□□□□□ -1.02
VPS25-203ENST00000589520 A8MXK9 166 aa8.67□□□□□ -1.02
VPS25-203ENST00000589520 B9A039 149 aa8.67□□□□□ -1.02
VPS25-203ENST00000589520 I3L521 148 aa8.67□□□□□ -1.02
VPS25-203ENST00000589520 TNFSF12O43508 249 aa8.67□□□□□ -1.02
VPS25-203ENST00000589520 MED6O75586 246 aa8.67□□□□□ -1.02
VPS25-203ENST00000589520 SCAF4O95104 1147 aaKnown RBP8.67□□□□□ -1.02
VPS25-203ENST00000589520 CD3EP07766 207 aa8.67□□□□□ -1.02
VPS25-203ENST00000589520 APOBEC3AP31941 199 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms