RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 RNF212BA8MTL3 300 aa24.18■■□□□ 1.46
CTDNEP1-208ENST00000573600 TMPRSS2O15393 492 aa24.18■■□□□ 1.46
CTDNEP1-208ENST00000573600 LYL1P12980 280 aa24.18■■□□□ 1.46
CTDNEP1-208ENST00000573600 PPP1CCP36873 323 aaKnown RBP24.18■■□□□ 1.46
CTDNEP1-208ENST00000573600 ACOT7LQ6ZUV0 252 aa24.18■■□□□ 1.46
CTDNEP1-208ENST00000573600 DRAM1Q8N682 238 aa24.18■■□□□ 1.46
CTDNEP1-208ENST00000573600 EDARADDQ8WWZ3 215 aa24.18■■□□□ 1.46
CTDNEP1-208ENST00000573600 GPHA2Q96T91 129 aa24.18■■□□□ 1.46
CTDNEP1-208ENST00000573600 ROS1P08922 2347 aa24.18■■□□□ 1.46
CTDNEP1-208ENST00000573600 CGB3P0DN86 165 aa24.18■■□□□ 1.46
CTDNEP1-208ENST00000573600 CGB7P0DN87 165 aa24.18■■□□□ 1.46
CTDNEP1-208ENST00000573600 RAB32Q13637 225 aa24.18■■□□□ 1.46
CTDNEP1-208ENST00000573600 TEX261Q6UWH6 196 aa24.18■■□□□ 1.46
CTDNEP1-208ENST00000573600 INO80EQ8NBZ0 244 aaPredicted RBP24.18■■□□□ 1.46
CTDNEP1-208ENST00000573600 RBPMSQ93062 196 aaKnown RBP24.18■■□□□ 1.46
CTDNEP1-208ENST00000573600 RNF126Q9BV68 326 aa24.18■■□□□ 1.46
CTDNEP1-208ENST00000573600 CALYQ9NYX4 217 aa24.18■■□□□ 1.46
CTDNEP1-208ENST00000573600 U3KQ87 197 aa24.18■■□□□ 1.46
CTDNEP1-208ENST00000573600 HIVEP3Q5T1R4 2406 aa24.17■■□□□ 1.46
CTDNEP1-208ENST00000573600 HFEQ30201 348 aa24.17■■□□□ 1.46
CTDNEP1-208ENST00000573600 OR2D2Q9H210 308 aa24.17■■□□□ 1.46
CTDNEP1-208ENST00000573600 CBLN4Q9NTU7 201 aa24.17■■□□□ 1.46
CTDNEP1-208ENST00000573600 ZFP57Q9NU63 452 aa24.17■■□□□ 1.46
CTDNEP1-208ENST00000573600 LIN7CQ9NUP9 197 aaKnown RBP24.17■■□□□ 1.46
CTDNEP1-208ENST00000573600 IGHV3-43A0A0B4J1X8 118 aa24.16■■□□□ 1.46
CTDNEP1-208ENST00000573600 YPEL1O60688 119 aa24.16■■□□□ 1.46
CTDNEP1-208ENST00000573600 IGHV3-43DP0DP04 118 aa24.16■■□□□ 1.46
CTDNEP1-208ENST00000573600 NDUFA5Q16718 116 aa24.16■■□□□ 1.46
CTDNEP1-208ENST00000573600 KCNRGQ8N5I3 272 aa24.16■■□□□ 1.46
CTDNEP1-208ENST00000573600 OR51H1Q8NH63 302 aa24.16■■□□□ 1.46
CTDNEP1-208ENST00000573600 DCUN1D4Q92564 292 aa24.16■■□□□ 1.46
CTDNEP1-208ENST00000573600 CORO2AQ92828 525 aa24.16■■□□□ 1.46
CTDNEP1-208ENST00000573600 YPEL2Q96QA6 119 aa24.16■■□□□ 1.46
CTDNEP1-208ENST00000573600 PLEKHF2Q9H8W4 249 aa24.16■■□□□ 1.46
CTDNEP1-208ENST00000573600 DSCAML1Q8TD84 2053 aa24.16■■□□□ 1.46
CTDNEP1-208ENST00000573600 TNFRSF13BO14836 293 aaPredicted RBP24.15■■□□□ 1.46
CTDNEP1-208ENST00000573600 RP2O75695 350 aa24.15■■□□□ 1.46
CTDNEP1-208ENST00000573600 CNTNAP3BQ96NU0 1288 aa24.15■■□□□ 1.46
CTDNEP1-208ENST00000573600 SPIN2AQ99865 258 aa24.15■■□□□ 1.46
CTDNEP1-208ENST00000573600 SPIN2BQ9BPZ2 258 aa24.15■■□□□ 1.46
CTDNEP1-208ENST00000573600 CNTNAP3Q9BZ76 1288 aa24.15■■□□□ 1.46
CTDNEP1-208ENST00000573600 GNG12Q9UBI6 72 aa24.15■■□□□ 1.46
CTDNEP1-208ENST00000573600 SLC25A10Q9UBX3 287 aaPredicted RBP24.15■■□□□ 1.46
CTDNEP1-208ENST00000573600 MEX3AA1L020 520 aaKnown RBP24.15■■□□□ 1.46
CTDNEP1-208ENST00000573600 H0YIZ8 118 aa24.15■■□□□ 1.46
CTDNEP1-208ENST00000573600 NDUFA2O43678 99 aa24.15■■□□□ 1.46
CTDNEP1-208ENST00000573600 AP2S1P53680 142 aaPredicted RBP24.15■■□□□ 1.46
CTDNEP1-208ENST00000573600 S100A10P60903 97 aa24.15■■□□□ 1.46
CTDNEP1-208ENST00000573600 SMCO1Q147U7 214 aa24.15■■□□□ 1.46
CTDNEP1-208ENST00000573600 ACACBO00763 2458 aa24.14■■□□□ 1.46
CTDNEP1-208ENST00000573600 KBTBD11-OT1A0A1B0GTJ5 212 aa24.14■■□□□ 1.45
CTDNEP1-208ENST00000573600 RNF222A6NCQ9 220 aa24.14■■□□□ 1.45
CTDNEP1-208ENST00000573600 ZNF729A6NN14 1252 aaPredicted RBP24.14■■□□□ 1.45
CTDNEP1-208ENST00000573600 RLN2P04090 185 aa24.14■■□□□ 1.45
CTDNEP1-208ENST00000573600 SERPINE2P07093 398 aa24.14■■□□□ 1.45
CTDNEP1-208ENST00000573600 C17orf58Q2M2W7 97 aa24.14■■□□□ 1.45
CTDNEP1-208ENST00000573600 TMEM30BQ3MIR4 351 aa24.14■■□□□ 1.45
CTDNEP1-208ENST00000573600 MORN2Q502X0 79 aa24.14■■□□□ 1.45
CTDNEP1-208ENST00000573600 CLN8Q9UBY8 286 aa24.14■■□□□ 1.45
CTDNEP1-208ENST00000573600 RNF150Q9ULK6 438 aa24.14■■□□□ 1.45
CTDNEP1-208ENST00000573600 hADV38S2A0JD32 116 aa24.13■■□□□ 1.45
CTDNEP1-208ENST00000573600 VDAC1P21796 283 aa24.13■■□□□ 1.45
CTDNEP1-208ENST00000573600 NUP62P37198 522 aaPredicted RBP24.13■■□□□ 1.45
CTDNEP1-208ENST00000573600 ZNF680Q8NEM1 530 aa24.13■■□□□ 1.45
CTDNEP1-208ENST00000573600 RAB1BQ9H0U4 201 aa24.13■■□□□ 1.45
CTDNEP1-208ENST00000573600 KAAG1Q9UBP8 84 aa24.13■■□□□ 1.45
CTDNEP1-208ENST00000573600 ITGB1BP2Q9UKP3 347 aa24.13■■□□□ 1.45
CTDNEP1-208ENST00000573600 IFNA7P01567 189 aa24.13■■□□□ 1.45
CTDNEP1-208ENST00000573600 NDUFB7P17568 137 aa24.13■■□□□ 1.45
CTDNEP1-208ENST00000573600 LOXL3P58215 753 aa24.13■■□□□ 1.45
CTDNEP1-208ENST00000573600 MEF2CQ06413 473 aaPredicted RBP24.13■■□□□ 1.45
CTDNEP1-208ENST00000573600 LTC4SQ16873 150 aa24.13■■□□□ 1.45
CTDNEP1-208ENST00000573600 FAM53AQ6NSI3 398 aaPredicted RBP24.13■■□□□ 1.45
CTDNEP1-208ENST00000573600 NBEAQ8NFP9 2946 aa24.13■■□□□ 1.45
CTDNEP1-208ENST00000573600 PKDREJQ9NTG1 2253 aa24.13■■□□□ 1.45
CTDNEP1-208ENST00000573600 ITGB1BP1O14713 200 aa24.12■■□□□ 1.45
CTDNEP1-208ENST00000573600 FSTL3O95633 263 aa24.12■■□□□ 1.45
CTDNEP1-208ENST00000573600 LINC00574Q9H8X3 128 aa24.12■■□□□ 1.45
CTDNEP1-208ENST00000573600 OR5AC2Q9NZP5 309 aa24.12■■□□□ 1.45
CTDNEP1-208ENST00000573600 ADAM20O43506 726 aa24.11■■□□□ 1.45
CTDNEP1-208ENST00000573600 NDUFB3O43676 98 aa24.11■■□□□ 1.45
CTDNEP1-208ENST00000573600 CATR1Q13166 79 aa24.11■■□□□ 1.45
CTDNEP1-208ENST00000573600 LRRC10Q5BKY1 277 aa24.11■■□□□ 1.45
CTDNEP1-208ENST00000573600 TAS2R3Q9NYW6 316 aa24.11■■□□□ 1.45
CTDNEP1-208ENST00000573600 PSG11Q9UQ72 335 aa24.11■■□□□ 1.45
CTDNEP1-208ENST00000573600 LINC00312Q9Y6C7 94 aa24.11■■□□□ 1.45
CTDNEP1-208ENST00000573600 KANTRA0A1W2PQU2 76 aa24.1■■□□□ 1.45
CTDNEP1-208ENST00000573600 CLEC18AA5D8T8 446 aa24.1■■□□□ 1.45
CTDNEP1-208ENST00000573600 C11orf71Q6IPW1 123 aa24.1■■□□□ 1.45
CTDNEP1-208ENST00000573600 CLEC18CQ8NCF0 446 aa24.1■■□□□ 1.45
CTDNEP1-208ENST00000573600 OR1S1Q8NH92 325 aa24.1■■□□□ 1.45
CTDNEP1-208ENST00000573600 AGMATQ9BSE5 352 aa24.1■■□□□ 1.45
CTDNEP1-208ENST00000573600 LPAR3Q9UBY5 353 aa24.1■■□□□ 1.45
CTDNEP1-208ENST00000573600 DEDDO75618 318 aa24.1■■□□□ 1.45
CTDNEP1-208ENST00000573600 EIF4EBP1Q13541 118 aaPredicted RBP24.1■■□□□ 1.45
CTDNEP1-208ENST00000573600 NMSQ5H8A3 153 aa24.1■■□□□ 1.45
CTDNEP1-208ENST00000573600 TCF23Q7RTU1 214 aa24.1■■□□□ 1.45
CTDNEP1-208ENST00000573600 SLC51BQ86UW2 128 aa24.1■■□□□ 1.45
CTDNEP1-208ENST00000573600 TCTEX1D1Q8N7M0 179 aa24.1■■□□□ 1.45
CTDNEP1-208ENST00000573600 OR4D5Q8NGN0 318 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms