RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 ZNRD1Q9P1U0 126 aa11.78□□□□□ -0.52
NPLOC4-209ENST00000572760 RBM7Q9Y580 266 aaKnown RBP11.78□□□□□ -0.52
NPLOC4-209ENST00000572760 HILPDAQ9Y5L2 63 aa11.78□□□□□ -0.52
NPLOC4-209ENST00000572760 TRBV6-7A0A0A0MS04 114 aa11.77□□□□□ -0.53
NPLOC4-209ENST00000572760 IGKV1-6A0A0C4DH72 117 aa11.77□□□□□ -0.53
NPLOC4-209ENST00000572760 SLC31A2O15432 143 aa11.77□□□□□ -0.53
NPLOC4-209ENST00000572760 RBBP9O75884 186 aa11.77□□□□□ -0.53
NPLOC4-209ENST00000572760 DIRAS3O95661 229 aa11.77□□□□□ -0.53
NPLOC4-209ENST00000572760 OR3A3P47888 321 aa11.77□□□□□ -0.53
NPLOC4-209ENST00000572760 ARHGDIBP52566 201 aa11.77□□□□□ -0.53
NPLOC4-209ENST00000572760 HERPUD1Q15011 391 aa11.77□□□□□ -0.53
NPLOC4-209ENST00000572760 PLA1AQ53H76 456 aa11.77□□□□□ -0.53
NPLOC4-209ENST00000572760 CT45A1Q5HYN5 189 aa11.77□□□□□ -0.53
NPLOC4-209ENST00000572760 LY6G6FQ5SQ64 297 aa11.77□□□□□ -0.53
NPLOC4-209ENST00000572760 SLC25A48Q6ZT89 311 aaKnown RBP11.77□□□□□ -0.53
NPLOC4-209ENST00000572760 C8orf31Q8N9H6 132 aa11.77□□□□□ -0.53
NPLOC4-209ENST00000572760 OR6Q1Q8NGQ2 317 aa11.77□□□□□ -0.53
NPLOC4-209ENST00000572760 OR52I2Q8NH67 350 aa11.77□□□□□ -0.53
NPLOC4-209ENST00000572760 CT45A3Q8NHU0 189 aa11.77□□□□□ -0.53
NPLOC4-209ENST00000572760 C17orf50Q8WW18 174 aa11.77□□□□□ -0.53
NPLOC4-209ENST00000572760 JMJD8Q96S16 334 aa11.77□□□□□ -0.53
NPLOC4-209ENST00000572760 RDH8Q9NYR8 311 aa11.77□□□□□ -0.53
NPLOC4-209ENST00000572760 ANK3Q12955 4377 aaKnown RBP11.77□□□□□ -0.53
NPLOC4-209ENST00000572760 BTBD17A6NE02 478 aa11.76□□□□□ -0.53
NPLOC4-209ENST00000572760 GABARAPH6UMI1 98 aa11.76□□□□□ -0.53
NPLOC4-209ENST00000572760 ST8SIA5O15466 376 aa11.76□□□□□ -0.53
NPLOC4-209ENST00000572760 TCF21O43680 179 aa11.76□□□□□ -0.53
NPLOC4-209ENST00000572760 RCVRNP35243 200 aa11.76□□□□□ -0.53
NPLOC4-209ENST00000572760 RAB7AP51149 207 aa11.76□□□□□ -0.53
NPLOC4-209ENST00000572760 ZNF134P52741 427 aa11.76□□□□□ -0.53
NPLOC4-209ENST00000572760 TAS2R46P59540 309 aa11.76□□□□□ -0.53
NPLOC4-209ENST00000572760 ACTBP60709 375 aa11.76□□□□□ -0.53
NPLOC4-209ENST00000572760 ACTG1P63261 375 aa11.76□□□□□ -0.53
NPLOC4-209ENST00000572760 BAMBIQ13145 260 aa11.76□□□□□ -0.53
NPLOC4-209ENST00000572760 PYDC2Q56P42 97 aa11.76□□□□□ -0.53
NPLOC4-209ENST00000572760 ZNF439Q8NDP4 499 aa11.76□□□□□ -0.53
NPLOC4-209ENST00000572760 OR5AP2Q8NGF4 316 aa11.76□□□□□ -0.53
NPLOC4-209ENST00000572760 OR5H2Q8NGV7 314 aa11.76□□□□□ -0.53
NPLOC4-209ENST00000572760 TOMM40LQ969M1 308 aa11.76□□□□□ -0.53
NPLOC4-209ENST00000572760 ZNF48Q96MX3 618 aaPredicted RBP11.76□□□□□ -0.53
NPLOC4-209ENST00000572760 C11orf54Q9H0W9 315 aaPredicted RBP11.76□□□□□ -0.53
NPLOC4-209ENST00000572760 ABCB10Q9NRK6 738 aa11.76□□□□□ -0.53
NPLOC4-209ENST00000572760 NECAP2Q9NVZ3 263 aa11.76□□□□□ -0.53
NPLOC4-209ENST00000572760 CTDSPLO15194 276 aa11.75□□□□□ -0.53
NPLOC4-209ENST00000572760 PAX6P26367 422 aa11.75□□□□□ -0.53
NPLOC4-209ENST00000572760 HLA-DMAP28067 261 aa11.75□□□□□ -0.53
NPLOC4-209ENST00000572760 DGCR2P98153 550 aa11.75□□□□□ -0.53
NPLOC4-209ENST00000572760 CDK10Q15131 360 aa11.75□□□□□ -0.53
NPLOC4-209ENST00000572760 TPTE2P1Q5T6R2 138 aa11.75□□□□□ -0.53
NPLOC4-209ENST00000572760 CCDC144NLQ6NUI1 221 aa11.75□□□□□ -0.53
NPLOC4-209ENST00000572760 Q6YL49 198 aa11.75□□□□□ -0.53
NPLOC4-209ENST00000572760 SSX3Q99909 188 aa11.75□□□□□ -0.53
NPLOC4-209ENST00000572760 MEGF9Q9H1U4 602 aa11.75□□□□□ -0.53
NPLOC4-209ENST00000572760 DPAGT1Q9H3H5 408 aa11.75□□□□□ -0.53
NPLOC4-209ENST00000572760 EHFQ9NZC4 300 aa11.75□□□□□ -0.53
NPLOC4-209ENST00000572760 RNF150Q9ULK6 438 aa11.75□□□□□ -0.53
NPLOC4-209ENST00000572760 JMJD1CQ15652 2540 aa11.75□□□□□ -0.53
NPLOC4-209ENST00000572760 OOSP1A8MZH6 123 aa11.74□□□□□ -0.53
NPLOC4-209ENST00000572760 J3QRK9 145 aa11.74□□□□□ -0.53
NPLOC4-209ENST00000572760 ITGB1BP1O14713 200 aa11.74□□□□□ -0.53
NPLOC4-209ENST00000572760 HSD17B6O14756 317 aa11.74□□□□□ -0.53
NPLOC4-209ENST00000572760 PMP2P02689 132 aa11.74□□□□□ -0.53
NPLOC4-209ENST00000572760 GAPDHP04406 335 aaKnown RBP11.74□□□□□ -0.53
NPLOC4-209ENST00000572760 OR5H8P0DN80 308 aa11.74□□□□□ -0.53
NPLOC4-209ENST00000572760 NAT1P18440 290 aa11.74□□□□□ -0.53
NPLOC4-209ENST00000572760 NFYAP23511 347 aaPredicted RBP11.74□□□□□ -0.53
NPLOC4-209ENST00000572760 PTBP1P26599 531 aaKnown RBP eCLIP11.74□□□□□ -0.53
NPLOC4-209ENST00000572760 BRS3P32247 399 aa11.74□□□□□ -0.53
NPLOC4-209ENST00000572760 LRRC75BQ2VPJ9 315 aa11.74□□□□□ -0.53
NPLOC4-209ENST00000572760 LDLRAD2Q5SZI1 272 aa11.74□□□□□ -0.53
NPLOC4-209ENST00000572760 CCDC190Q86UF4 302 aa11.74□□□□□ -0.53
NPLOC4-209ENST00000572760 LDLRAD3Q86YD5 345 aa11.74□□□□□ -0.53
NPLOC4-209ENST00000572760 H1FOOQ8IZA3 346 aaPredicted RBP11.74□□□□□ -0.53
NPLOC4-209ENST00000572760 SMIM4Q8WVI0 70 aa11.74□□□□□ -0.53
NPLOC4-209ENST00000572760 SNAPC3Q92966 411 aa11.74□□□□□ -0.53
NPLOC4-209ENST00000572760 S1PR3Q99500 378 aa11.74□□□□□ -0.53
NPLOC4-209ENST00000572760 PARP12Q9H0J9 701 aaKnown RBP11.74□□□□□ -0.53
NPLOC4-209ENST00000572760 GHITMQ9H3K2 345 aa11.74□□□□□ -0.53
NPLOC4-209ENST00000572760 TNFRSF19Q9NS68 423 aa11.74□□□□□ -0.53
NPLOC4-209ENST00000572760 PTTG2Q9NZH5 202 aa11.74□□□□□ -0.53
NPLOC4-209ENST00000572760 PIPOXQ9P0Z9 390 aa11.74□□□□□ -0.53
NPLOC4-209ENST00000572760 KLK11Q9UBX7 282 aa11.74□□□□□ -0.53
NPLOC4-209ENST00000572760 MTFP1Q9UDX5 166 aa11.74□□□□□ -0.53
NPLOC4-209ENST00000572760 ZNF221Q9UK13 617 aa11.74□□□□□ -0.53
NPLOC4-209ENST00000572760 ANAPC10Q9UM13 185 aa11.74□□□□□ -0.53
NPLOC4-209ENST00000572760 A0A0A6YYJ9 748 aa11.73□□□□□ -0.53
NPLOC4-209ENST00000572760 LY6LH3BQJ8 138 aa11.73□□□□□ -0.53
NPLOC4-209ENST00000572760 RAB29O14966 203 aa11.73□□□□□ -0.53
NPLOC4-209ENST00000572760 HOXA3O43365 443 aaPredicted RBP11.73□□□□□ -0.53
NPLOC4-209ENST00000572760 OR8U9P0C7N5 309 aa11.73□□□□□ -0.53
NPLOC4-209ENST00000572760 FCGR2CP31995 323 aa11.73□□□□□ -0.53
NPLOC4-209ENST00000572760 GPR12P47775 334 aa11.73□□□□□ -0.53
NPLOC4-209ENST00000572760 REG1BP48304 166 aa11.73□□□□□ -0.53
NPLOC4-209ENST00000572760 TSPAN5P62079 268 aa11.73□□□□□ -0.53
NPLOC4-209ENST00000572760 SSBP1Q04837 148 aaKnown RBP11.73□□□□□ -0.53
NPLOC4-209ENST00000572760 ACTBL2Q562R1 376 aa11.73□□□□□ -0.53
NPLOC4-209ENST00000572760 MOB3BQ86TA1 216 aa11.73□□□□□ -0.53
NPLOC4-209ENST00000572760 TGIF2LXQ8IUE1 241 aa11.73□□□□□ -0.53
NPLOC4-209ENST00000572760 DYNAPQ8N1N2 210 aa11.73□□□□□ -0.53
NPLOC4-209ENST00000572760 OR8U1Q8NH10 309 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms