RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 SIRPB1O00241 398 aa14.8□□□□□ -0.04
SCARF1-205ENST00000571272 OPN1MWP04001 364 aa14.8□□□□□ -0.04
SCARF1-205ENST00000571272 OPN1MW2P0DN77 364 aa14.8□□□□□ -0.04
SCARF1-205ENST00000571272 OPN1MW3P0DN78 364 aa14.8□□□□□ -0.04
SCARF1-205ENST00000571272 CA6P23280 308 aa14.8□□□□□ -0.04
SCARF1-205ENST00000571272 SPATA46Q5T0L3 261 aa14.8□□□□□ -0.04
SCARF1-205ENST00000571272 OR4X1Q8NH49 305 aa14.8□□□□□ -0.04
SCARF1-205ENST00000571272 RPUSD4Q96CM3 377 aaKnown RBP14.8□□□□□ -0.04
SCARF1-205ENST00000571272 PSMG3Q9BT73 122 aaPredicted RBP14.8□□□□□ -0.04
SCARF1-205ENST00000571272 WDR61Q9GZS3 305 aaKnown RBP14.8□□□□□ -0.04
SCARF1-205ENST00000571272 SLC39A9Q9NUM3 307 aa14.8□□□□□ -0.04
SCARF1-205ENST00000571272 UFSP2Q9NUQ7 469 aa14.8□□□□□ -0.04
SCARF1-205ENST00000571272 PILRBQ9UKJ0 227 aa14.8□□□□□ -0.04
SCARF1-205ENST00000571272 USF3Q68DE3 2245 aa14.8□□□□□ -0.04
SCARF1-205ENST00000571272 TRBV24-1A0A075B6N3 115 aa14.8□□□□□ -0.04
SCARF1-205ENST00000571272 A0A1W2PR80 420 aa14.8□□□□□ -0.04
SCARF1-205ENST00000571272 ANKRD30BLA7E2S9 258 aa14.8□□□□□ -0.04
SCARF1-205ENST00000571272 IGKV1D-33P01593 117 aa14.8□□□□□ -0.04
SCARF1-205ENST00000571272 IGKV1-33P01594 117 aa14.8□□□□□ -0.04
SCARF1-205ENST00000571272 TMEM41BQ5BJD5 291 aa14.8□□□□□ -0.04
SCARF1-205ENST00000571272 TDHQ8IZJ6 230 aa14.8□□□□□ -0.04
SCARF1-205ENST00000571272 LSM10Q969L4 123 aaKnown RBP14.8□□□□□ -0.04
SCARF1-205ENST00000571272 RNF150Q9ULK6 438 aa14.8□□□□□ -0.04
SCARF1-205ENST00000571272 SMCO3A2RU48 225 aa14.79□□□□□ -0.04
SCARF1-205ENST00000571272 IL2RGP31785 369 aa14.79□□□□□ -0.04
SCARF1-205ENST00000571272 SERF2P84101 59 aa14.79□□□□□ -0.04
SCARF1-205ENST00000571272 NRN1LQ496H8 165 aa14.79□□□□□ -0.04
SCARF1-205ENST00000571272 C16orf82Q7Z2V1 217 aa14.79□□□□□ -0.04
SCARF1-205ENST00000571272 VASH2Q86V25 355 aa14.79□□□□□ -0.04
SCARF1-205ENST00000571272 RPP25LQ8N5L8 163 aaKnown RBP14.79□□□□□ -0.04
SCARF1-205ENST00000571272 OR10A7Q8NGE5 316 aa14.79□□□□□ -0.04
SCARF1-205ENST00000571272 SMOC1Q9H4F8 434 aa14.79□□□□□ -0.04
SCARF1-205ENST00000571272 CD81P60033 236 aa14.79□□□□□ -0.04
SCARF1-205ENST00000571272 NCR3LG1Q68D85 454 aa14.79□□□□□ -0.04
SCARF1-205ENST00000571272 GTF3AQ92664 365 aaKnown RBP14.79□□□□□ -0.04
SCARF1-205ENST00000571272 POM121L2Q96KW2 1035 aa14.79□□□□□ -0.04
SCARF1-205ENST00000571272 P2RX4Q99571 388 aa14.79□□□□□ -0.04
SCARF1-205ENST00000571272 HES7Q9BYE0 225 aa14.79□□□□□ -0.04
SCARF1-205ENST00000571272 TNRC6AQ8NDV7 1962 aaKnown RBP14.79□□□□□ -0.04
SCARF1-205ENST00000571272 GTF3C1Q12789 2109 aa14.79□□□□□ -0.04
SCARF1-205ENST00000571272 ERVS71-1P61550 626 aa14.79□□□□□ -0.04
SCARF1-205ENST00000571272 GNG3P63215 75 aa14.79□□□□□ -0.04
SCARF1-205ENST00000571272 ZNF573Q86YE8 665 aa14.79□□□□□ -0.04
SCARF1-205ENST00000571272 TAF15Q92804 592 aaKnown RBP eCLIP14.79□□□□□ -0.04
SCARF1-205ENST00000571272 TRAPPC2LQ9UL33 140 aa14.79□□□□□ -0.04
SCARF1-205ENST00000571272 SIT1Q9Y3P8 196 aa14.79□□□□□ -0.04
SCARF1-205ENST00000571272 TRBV6-6A0A0A6YYG2 114 aa14.78□□□□□ -0.04
SCARF1-205ENST00000571272 A0A1B0GV90 55 aa14.78□□□□□ -0.04
SCARF1-205ENST00000571272 NTN3O00634 580 aaPredicted RBP14.78□□□□□ -0.04
SCARF1-205ENST00000571272 CLDN1O95832 211 aa14.78□□□□□ -0.04
SCARF1-205ENST00000571272 DDTP30046 118 aa14.78□□□□□ -0.04
SCARF1-205ENST00000571272 RPS16P62249 146 aaKnown RBP14.78□□□□□ -0.04
SCARF1-205ENST00000571272 SLC38A11Q08AI6 406 aa14.78□□□□□ -0.04
SCARF1-205ENST00000571272 SLC25A22Q9H936 323 aa14.78□□□□□ -0.04
SCARF1-205ENST00000571272 PITPNC1Q9UKF7 332 aa14.78□□□□□ -0.04
SCARF1-205ENST00000571272 LAMP3Q9UQV4 416 aa14.78□□□□□ -0.04
SCARF1-205ENST00000571272 FAM166BA8MTA8 275 aa14.78□□□□□ -0.04
SCARF1-205ENST00000571272 IFNA1P01562 189 aa14.78□□□□□ -0.04
SCARF1-205ENST00000571272 RTP5Q14D33 572 aa14.78□□□□□ -0.04
SCARF1-205ENST00000571272 GATAD1Q8WUU5 269 aa14.78□□□□□ -0.04
SCARF1-205ENST00000571272 CDH20Q9HBT6 801 aa14.78□□□□□ -0.04
SCARF1-205ENST00000571272 TMEM9BQ9NQ34 198 aa14.78□□□□□ -0.04
SCARF1-205ENST00000571272 PRSS50Q9UI38 385 aa14.78□□□□□ -0.04
SCARF1-205ENST00000571272 IGKV3D-15A0A087WSY6 115 aa14.77□□□□□ -0.04
SCARF1-205ENST00000571272 A0A087X0M5 115 aa14.77□□□□□ -0.04
SCARF1-205ENST00000571272 A0A1B0GX30 115 aa14.77□□□□□ -0.04
SCARF1-205ENST00000571272 WNT5AP41221 380 aa14.77□□□□□ -0.04
SCARF1-205ENST00000571272 MEF2BQ02080 365 aaPredicted RBP14.77□□□□□ -0.04
SCARF1-205ENST00000571272 COL10A1Q03692 680 aa14.77□□□□□ -0.04
SCARF1-205ENST00000571272 SSX9Q7RTT3 188 aa14.77□□□□□ -0.04
SCARF1-205ENST00000571272 LINC00470Q9BZP3 86 aa14.77□□□□□ -0.04
SCARF1-205ENST00000571272 NAT8Q9UHE5 227 aa14.77□□□□□ -0.04
SCARF1-205ENST00000571272 RNF224P0DH78 156 aa14.77□□□□□ -0.05
SCARF1-205ENST00000571272 LHX2P50458 406 aa14.77□□□□□ -0.05
SCARF1-205ENST00000571272 PKIAP61925 76 aa14.77□□□□□ -0.05
SCARF1-205ENST00000571272 PLP2Q04941 152 aa14.77□□□□□ -0.05
SCARF1-205ENST00000571272 C3AR1Q16581 482 aa14.77□□□□□ -0.05
SCARF1-205ENST00000571272 TMEM241Q24JQ0 296 aa14.77□□□□□ -0.05
SCARF1-205ENST00000571272 PMS2CLQ68D20 193 aa14.77□□□□□ -0.05
SCARF1-205ENST00000571272 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.77□□□□□ -0.05
SCARF1-205ENST00000571272 FGFRL1Q8N441 504 aa14.77□□□□□ -0.05
SCARF1-205ENST00000571272 PINX1Q96BK5 328 aaKnown RBP14.77□□□□□ -0.05
SCARF1-205ENST00000571272 GPR87Q9BY21 358 aa14.77□□□□□ -0.05
SCARF1-205ENST00000571272 CTDSP1Q9GZU7 261 aa14.77□□□□□ -0.05
SCARF1-205ENST00000571272 TSTD3H0UI37 97 aa14.76□□□□□ -0.05
SCARF1-205ENST00000571272 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.76□□□□□ -0.05
SCARF1-205ENST00000571272 TGOLN2O43493 480 aa14.76□□□□□ -0.05
SCARF1-205ENST00000571272 SS18L1O75177 396 aaPredicted RBP14.76□□□□□ -0.05
SCARF1-205ENST00000571272 CEACAM6P40199 344 aa14.76□□□□□ -0.05
SCARF1-205ENST00000571272 LINC00596Q86U02 117 aa14.76□□□□□ -0.05
SCARF1-205ENST00000571272 ELOVL1Q9BW60 279 aa14.76□□□□□ -0.05
SCARF1-205ENST00000571272 GZMHP20718 246 aa14.76□□□□□ -0.05
SCARF1-205ENST00000571272 BSXQ3C1V8 233 aa14.76□□□□□ -0.05
SCARF1-205ENST00000571272 Q6P435 159 aa14.76□□□□□ -0.05
SCARF1-205ENST00000571272 ACSM6Q6P461 480 aa14.76□□□□□ -0.05
SCARF1-205ENST00000571272 DRAM1Q8N682 238 aa14.76□□□□□ -0.05
SCARF1-205ENST00000571272 APH1AQ96BI3 265 aa14.76□□□□□ -0.05
SCARF1-205ENST00000571272 LIN7CQ9NUP9 197 aaKnown RBP14.76□□□□□ -0.05
SCARF1-205ENST00000571272 BOKQ9UMX3 212 aaPredicted RBP14.76□□□□□ -0.05
SCARF1-205ENST00000571272 TNRC6BQ9UPQ9 1833 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms