RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 ZNF705FA8MVS1 300 aaPredicted RBP11.93□□□□□ -0.5
RABGGTA-220ENST00000560998 CDX4O14627 284 aaPredicted RBP11.93□□□□□ -0.5
RABGGTA-220ENST00000560998 ZNF705DP0CH99 300 aaPredicted RBP11.93□□□□□ -0.5
RABGGTA-220ENST00000560998 ZNF705BP0CI00 300 aaPredicted RBP11.93□□□□□ -0.5
RABGGTA-220ENST00000560998 OMGP23515 440 aa11.93□□□□□ -0.5
RABGGTA-220ENST00000560998 RBX1P62877 108 aa11.93□□□□□ -0.5
RABGGTA-220ENST00000560998 RUNX1Q01196 453 aa11.93□□□□□ -0.5
RABGGTA-220ENST00000560998 OR5I1Q13606 314 aa11.93□□□□□ -0.5
RABGGTA-220ENST00000560998 MPV17LQ2QL34 196 aa11.93□□□□□ -0.5
RABGGTA-220ENST00000560998 PHLDA2Q53GA4 152 aa11.93□□□□□ -0.5
RABGGTA-220ENST00000560998 TSPO2Q5TGU0 170 aa11.93□□□□□ -0.5
RABGGTA-220ENST00000560998 MYO7BQ6PIF6 2116 aa11.93□□□□□ -0.5
RABGGTA-220ENST00000560998 SSX7Q7RTT5 188 aa11.93□□□□□ -0.5
RABGGTA-220ENST00000560998 C6orf201Q7Z4U5 140 aa11.93□□□□□ -0.5
RABGGTA-220ENST00000560998 OR1F12Q8NHA8 337 aa11.93□□□□□ -0.5
RABGGTA-220ENST00000560998 Q96M66 194 aa11.93□□□□□ -0.5
RABGGTA-220ENST00000560998 TMEM56Q96MV1 263 aa11.93□□□□□ -0.5
RABGGTA-220ENST00000560998 ALKBH3Q96Q83 286 aaPredicted RBP11.93□□□□□ -0.5
RABGGTA-220ENST00000560998 TMEM222Q9H0R3 208 aa11.93□□□□□ -0.5
RABGGTA-220ENST00000560998 ZNF665Q9H7R5 613 aa11.93□□□□□ -0.5
RABGGTA-220ENST00000560998 ELL3Q9HB65 397 aaPredicted RBP11.93□□□□□ -0.5
RABGGTA-220ENST00000560998 MSL2Q9HCI7 577 aa11.93□□□□□ -0.5
RABGGTA-220ENST00000560998 TMEM56-RWDD3S4R434 201 aa11.93□□□□□ -0.5
RABGGTA-220ENST00000560998 OR6C6A6NF89 314 aa11.92□□□□□ -0.5
RABGGTA-220ENST00000560998 C21orf140B9A014 251 aa11.92□□□□□ -0.5
RABGGTA-220ENST00000560998 TMEM250H0YL14 139 aa11.92□□□□□ -0.5
RABGGTA-220ENST00000560998 NEURL1O76050 574 aa11.92□□□□□ -0.5
RABGGTA-220ENST00000560998 CD55P08174 381 aa11.92□□□□□ -0.5
RABGGTA-220ENST00000560998 FCGR2AP12318 317 aa11.92□□□□□ -0.5
RABGGTA-220ENST00000560998 B4GALT1P15291 398 aa11.92□□□□□ -0.5
RABGGTA-220ENST00000560998 UCP1P25874 307 aa11.92□□□□□ -0.5
RABGGTA-220ENST00000560998 CDKN1BP46527 198 aa11.92□□□□□ -0.5
RABGGTA-220ENST00000560998 KRTAP27-1Q3LI81 207 aa11.92□□□□□ -0.5
RABGGTA-220ENST00000560998 RIPPLY2Q5TAB7 128 aa11.92□□□□□ -0.5
RABGGTA-220ENST00000560998 TMEM37Q8WXS4 190 aa11.92□□□□□ -0.5
RABGGTA-220ENST00000560998 FAM173AQ9BQD7 235 aa11.92□□□□□ -0.5
RABGGTA-220ENST00000560998 PCGF1Q9BSM1 259 aa11.92□□□□□ -0.5
RABGGTA-220ENST00000560998 DNAJC4Q9NNZ3 241 aa11.92□□□□□ -0.5
RABGGTA-220ENST00000560998 BDP1A6H8Y1 2624 aa11.92□□□□□ -0.5
RABGGTA-220ENST00000560998 C3orf85A0A1B0GTC6 90 aa11.92□□□□□ -0.5
RABGGTA-220ENST00000560998 TCF21O43680 179 aa11.92□□□□□ -0.5
RABGGTA-220ENST00000560998 MT-CO3P00414 261 aa11.92□□□□□ -0.5
RABGGTA-220ENST00000560998 ZNF32P17041 273 aa11.92□□□□□ -0.5
RABGGTA-220ENST00000560998 NPBWR2P48146 333 aa11.92□□□□□ -0.5
RABGGTA-220ENST00000560998 FXYD4P59646 89 aa11.92□□□□□ -0.5
RABGGTA-220ENST00000560998 SELENOTP62341 195 aa11.92□□□□□ -0.5
RABGGTA-220ENST00000560998 TMEM164Q5U3C3 297 aa11.92□□□□□ -0.5
RABGGTA-220ENST00000560998 ODF3L1Q8IXM7 274 aa11.92□□□□□ -0.5
RABGGTA-220ENST00000560998 OR2M7Q8NG81 312 aa11.92□□□□□ -0.5
RABGGTA-220ENST00000560998 PIGTQ969N2 578 aa11.92□□□□□ -0.5
RABGGTA-220ENST00000560998 SIGLEC12Q96PQ1 595 aa11.92□□□□□ -0.5
RABGGTA-220ENST00000560998 RBKSQ9H477 322 aa11.92□□□□□ -0.5
RABGGTA-220ENST00000560998 AURKAIP1Q9NWT8 199 aaPredicted RBP11.92□□□□□ -0.5
RABGGTA-220ENST00000560998 PIGBOS1A0A0B4J2F0 54 aa11.91□□□□□ -0.5
RABGGTA-220ENST00000560998 CEBPZOSA8MTT3 80 aa11.91□□□□□ -0.5
RABGGTA-220ENST00000560998 RAB7AP51149 207 aa11.91□□□□□ -0.5
RABGGTA-220ENST00000560998 HERV-K104P61576 105 aa11.91□□□□□ -0.5
RABGGTA-220ENST00000560998 RPL23P62829 140 aaKnown RBP11.91□□□□□ -0.5
RABGGTA-220ENST00000560998 GNB2P62879 340 aa11.91□□□□□ -0.5
RABGGTA-220ENST00000560998 PAFAH1B2P68402 229 aa11.91□□□□□ -0.5
RABGGTA-220ENST00000560998 ID3Q02535 119 aa11.91□□□□□ -0.5
RABGGTA-220ENST00000560998 OR8B8Q15620 311 aa11.91□□□□□ -0.5
RABGGTA-220ENST00000560998 CEACAM16Q2WEN9 425 aa11.91□□□□□ -0.5
RABGGTA-220ENST00000560998 ABHD17BQ5VST6 288 aa11.91□□□□□ -0.5
RABGGTA-220ENST00000560998 LEMD1Q68G75 181 aa11.91□□□□□ -0.5
RABGGTA-220ENST00000560998 ABHD3Q8WU67 409 aa11.91□□□□□ -0.5
RABGGTA-220ENST00000560998 FOXB1Q99853 325 aa11.91□□□□□ -0.5
RABGGTA-220ENST00000560998 REPIN1Q9BWE0 567 aaKnown RBP11.91□□□□□ -0.5
RABGGTA-220ENST00000560998 MPPED1O15442 326 aa11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 YPEL1O60688 119 aa11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 CST7O76096 145 aa11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 PATE4P0C8F1 98 aa11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 SELEP16581 610 aa11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 SOX8P57073 446 aa11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 RPP30P78346 268 aaKnown RBP11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 SERF2P84101 59 aa11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 PSG4Q00888 419 aa11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 AARDQ4LEZ3 155 aa11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 SLC25A24Q6NUK1 477 aa11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 MEX3BQ6ZN04 569 aaKnown RBP11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 ZNF695Q8IW36 515 aa11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 NECAP1Q8NC96 275 aa11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 OR2AE1Q8NHA4 323 aa11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 ORAOV1Q8WV07 137 aa11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 TMEM45BQ96B21 275 aa11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 PINX1Q96BK5 328 aaKnown RBP11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 YPEL2Q96QA6 119 aa11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 TP53RKQ96S44 253 aa11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 SPOCK3Q9BQ16 436 aa11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 HDHD3Q9BSH5 251 aaPredicted RBP11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 OR2H1Q9GZK4 316 aa11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 NCOR1P1Q9H4R4 102 aa11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 GSX1Q9H4S2 264 aaPredicted RBP11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 ZNF703Q9H7S9 590 aaPredicted RBP11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 ZNF286AQ9HBT8 521 aa11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 TMEM106BQ9NUM4 274 aa11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 NCOR1O75376 2440 aa11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 AHCTF1Q8WYP5 2266 aa11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 C20orf202A1L168 122 aa11.9□□□□□ -0.5
RABGGTA-220ENST00000560998 K7EP13 123 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms