RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 IL5P05113 134 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 PCOLCEQ15113 449 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 SLC18B1Q6NT16 456 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 C10orf126Q8N4M7 172 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 OR51G1Q8NGK1 321 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 APOBEC4Q8WW27 367 aaKnown RBP7.64□□□□□ -1.19
VPS13D-212ENST00000543766 MUCL1Q96DR8 90 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 GGTLC1Q9BX51 225 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 WNT10AQ9GZT5 417 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 MUC21A0A140T8X8 626 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 IFITM5A6NNB3 132 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 SNRPGP15A8MWD9 76 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 DUSP11O75319 330 aaKnown RBP7.64□□□□□ -1.19
VPS13D-212ENST00000543766 NXPH3O95157 252 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 SYNGR4O95473 234 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 WDR5P61964 334 aaKnown RBP7.64□□□□□ -1.19
VPS13D-212ENST00000543766 MUC21Q5SSG8 566 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 SLC25A47Q6Q0C1 308 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 DTX1Q86Y01 620 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 PTPMT1Q8WUK0 201 aaPredicted RBP7.64□□□□□ -1.19
VPS13D-212ENST00000543766 C15orf40Q8WUR7 153 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 ZMAT4Q9H898 229 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 NUDT4Q9NZJ9 180 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 CLCF1Q9UBD9 225 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 POLDIP2Q9Y2S7 368 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 F11RQ9Y624 299 aaKnown RBP7.64□□□□□ -1.19
VPS13D-212ENST00000543766 MCM3APO60318 1980 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 CASP8AP2Q9UKL3 1982 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 DNAH14Q0VDD8 3507 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 FAM90A7PA6NKC0 464 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 FAM90A22PA8MWA6 464 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 FAM90A12PA8MX19 464 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 FAM90A23PA8MXZ1 464 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 A8MZ25 164 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 TMEM50AO95807 157 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 HBZP02008 142 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 MT-ATP8P03928 68 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 SLC25A6P12236 298 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 HIST1H1DP16402 221 aaKnown RBP7.64□□□□□ -1.19
VPS13D-212ENST00000543766 ATF1P18846 271 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 TNFRSF1BP20333 461 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 SSR2P43308 183 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 FOXE3Q13461 319 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 ACSF3Q4G176 576 aaPredicted RBP7.64□□□□□ -1.19
VPS13D-212ENST00000543766 TRMT12Q53H54 448 aaKnown RBP7.64□□□□□ -1.19
VPS13D-212ENST00000543766 PEAR1Q5VY43 1037 aaPredicted RBP7.64□□□□□ -1.19
VPS13D-212ENST00000543766 RPTNQ6XPR3 784 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 C11orf44Q8N8P7 122 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 OR10S1Q8NGN2 331 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 THEM6Q8WUY1 208 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 METRNQ9UJH8 293 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.63□□□□□ -1.19
VPS13D-212ENST00000543766 FAM90A8PA6NJQ4 464 aa7.63□□□□□ -1.19
VPS13D-212ENST00000543766 CCL22O00626 93 aa7.63□□□□□ -1.19
VPS13D-212ENST00000543766 TNFRSF10CO14798 259 aa7.63□□□□□ -1.19
VPS13D-212ENST00000543766 KLF7O75840 302 aaPredicted RBP7.63□□□□□ -1.19
VPS13D-212ENST00000543766 FAM90A13PP0C7W8 464 aa7.63□□□□□ -1.19
VPS13D-212ENST00000543766 FAM90A24PP0C7X0 464 aa7.63□□□□□ -1.19
VPS13D-212ENST00000543766 TPPP2P59282 170 aa7.63□□□□□ -1.19
VPS13D-212ENST00000543766 RPS14P62263 151 aaKnown RBP7.63□□□□□ -1.19
VPS13D-212ENST00000543766 FZD2Q14332 565 aa7.63□□□□□ -1.19
VPS13D-212ENST00000543766 PDGFRLQ15198 375 aa7.63□□□□□ -1.19
VPS13D-212ENST00000543766 FBXW12Q6X9E4 464 aa7.63□□□□□ -1.19
VPS13D-212ENST00000543766 SSX8Q7RTT4 187 aa7.63□□□□□ -1.19
VPS13D-212ENST00000543766 PPTC7Q8NI37 304 aa7.63□□□□□ -1.19
VPS13D-212ENST00000543766 NAT6Q93015 286 aa7.63□□□□□ -1.19
VPS13D-212ENST00000543766 SFXN3Q9BWM7 321 aa7.63□□□□□ -1.19
VPS13D-212ENST00000543766 HELZP42694 1942 aaKnown RBP7.63□□□□□ -1.19
VPS13D-212ENST00000543766 DUXBA0A1W2PPF3 345 aa7.63□□□□□ -1.19
VPS13D-212ENST00000543766 TAX1BP3O14907 124 aa7.63□□□□□ -1.19
VPS13D-212ENST00000543766 MPPED1O15442 326 aa7.63□□□□□ -1.19
VPS13D-212ENST00000543766 GRB2P62993 217 aaKnown RBP7.63□□□□□ -1.19
VPS13D-212ENST00000543766 SYPL1Q16563 259 aa7.63□□□□□ -1.19
VPS13D-212ENST00000543766 SYT14P1Q58G82 188 aa7.63□□□□□ -1.19
VPS13D-212ENST00000543766 ALG10BQ5I7T1 473 aa7.63□□□□□ -1.19
VPS13D-212ENST00000543766 HFE2Q6ZVN8 426 aa7.63□□□□□ -1.19
VPS13D-212ENST00000543766 BHLHA9Q7RTU4 235 aa7.63□□□□□ -1.19
VPS13D-212ENST00000543766 MDS2Q8NDY4 140 aa7.63□□□□□ -1.19
VPS13D-212ENST00000543766 PRRG4Q9BZD6 226 aa7.63□□□□□ -1.19
VPS13D-212ENST00000543766 TAS2R5Q9NYW4 299 aa7.63□□□□□ -1.19
VPS13D-212ENST00000543766 TRIOBPQ9H2D6 2365 aa7.63□□□□□ -1.19
VPS13D-212ENST00000543766 TRAV38-1A0A0B4J264 116 aa7.63□□□□□ -1.19
VPS13D-212ENST00000543766 CDC14CA4D256 554 aa7.63□□□□□ -1.19
VPS13D-212ENST00000543766 S100A3P33764 101 aa7.63□□□□□ -1.19
VPS13D-212ENST00000543766 H2BFSP57053 126 aa7.63□□□□□ -1.19
VPS13D-212ENST00000543766 RPS24P62847 133 aaKnown RBP7.63□□□□□ -1.19
VPS13D-212ENST00000543766 DGCR2P98153 550 aa7.63□□□□□ -1.19
VPS13D-212ENST00000543766 TAF10Q12962 218 aa7.63□□□□□ -1.19
VPS13D-212ENST00000543766 BCDIN3DQ7Z5W3 292 aaKnown RBP7.63□□□□□ -1.19
VPS13D-212ENST00000543766 MRGPREQ86SM8 312 aa7.63□□□□□ -1.19
VPS13D-212ENST00000543766 CMTM2Q8TAZ6 248 aa7.63□□□□□ -1.19
VPS13D-212ENST00000543766 MRPL17Q9NRX2 175 aaKnown RBP7.63□□□□□ -1.19
VPS13D-212ENST00000543766 TMEM106BQ9NUM4 274 aa7.63□□□□□ -1.19
VPS13D-212ENST00000543766 TAPBPO15533 448 aa7.62□□□□□ -1.19
VPS13D-212ENST00000543766 PSG7Q13046 419 aa7.62□□□□□ -1.19
VPS13D-212ENST00000543766 DUSP5Q16690 384 aa7.62□□□□□ -1.19
VPS13D-212ENST00000543766 LINC00303Q3SY05 128 aa7.62□□□□□ -1.19
VPS13D-212ENST00000543766 ZNF587Q96SQ5 575 aaPredicted RBP7.62□□□□□ -1.19
VPS13D-212ENST00000543766 NIPSNAP3BQ9BS92 247 aa7.62□□□□□ -1.19
VPS13D-212ENST00000543766 DUSP23Q9BVJ7 150 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms