RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 LINC00311Q8N616 119 aa8.84□□□□□ -0.99
DDB1-222ENST00000543627 DTX3Q8N9I9 347 aa8.84□□□□□ -0.99
DDB1-222ENST00000543627 LGALS14Q8TCE9 139 aa8.84□□□□□ -0.99
DDB1-222ENST00000543627 RTN4IP1Q8WWV3 396 aaPredicted RBP8.84□□□□□ -0.99
DDB1-222ENST00000543627 ABHD14AQ9BUJ0 271 aa8.84□□□□□ -0.99
DDB1-222ENST00000543627 RANBP3Q9H6Z4 567 aaPredicted RBP8.84□□□□□ -0.99
DDB1-222ENST00000543627 Q9N2K0 584 aa8.84□□□□□ -0.99
DDB1-222ENST00000543627 C12orf4Q9NQ89 552 aa8.84□□□□□ -0.99
DDB1-222ENST00000543627 ZNF230Q9UIE0 474 aaPredicted RBP8.84□□□□□ -0.99
DDB1-222ENST00000543627 RNF150Q9ULK6 438 aa8.84□□□□□ -0.99
DDB1-222ENST00000543627 HSF4Q9ULV5 492 aa8.84□□□□□ -0.99
DDB1-222ENST00000543627 J3QRK9 145 aa8.83□□□□□ -1
DDB1-222ENST00000543627 BET1O15155 118 aa8.83□□□□□ -1
DDB1-222ENST00000543627 YPEL1O60688 119 aa8.83□□□□□ -1
DDB1-222ENST00000543627 OR2F2O95006 317 aa8.83□□□□□ -1
DDB1-222ENST00000543627 NAPSAO96009 420 aa8.83□□□□□ -1
DDB1-222ENST00000543627 OR3A3P47888 321 aa8.83□□□□□ -1
DDB1-222ENST00000543627 HTD2P86397 168 aa8.83□□□□□ -1
DDB1-222ENST00000543627 ZNF816Q0VGE8 651 aaPredicted RBP8.83□□□□□ -1
DDB1-222ENST00000543627 NSUN5P1Q3KNT7 163 aa8.83□□□□□ -1
DDB1-222ENST00000543627 TMEM30BQ3MIR4 351 aa8.83□□□□□ -1
DDB1-222ENST00000543627 CDNFQ49AH0 187 aa8.83□□□□□ -1
DDB1-222ENST00000543627 Q6ZPA2 131 aa8.83□□□□□ -1
DDB1-222ENST00000543627 MOB1BQ7L9L4 216 aa8.83□□□□□ -1
DDB1-222ENST00000543627 C16orf82Q7Z2V1 217 aa8.83□□□□□ -1
DDB1-222ENST00000543627 ZNF439Q8NDP4 499 aa8.83□□□□□ -1
DDB1-222ENST00000543627 OR5H6Q8NGV6 325 aa8.83□□□□□ -1
DDB1-222ENST00000543627 ABHD14BQ96IU4 210 aa8.83□□□□□ -1
DDB1-222ENST00000543627 YPEL2Q96QA6 119 aa8.83□□□□□ -1
DDB1-222ENST00000543627 ST6GALNAC5Q9BVH7 336 aa8.83□□□□□ -1
DDB1-222ENST00000543627 ZNF696Q9H7X3 374 aa8.83□□□□□ -1
DDB1-222ENST00000543627 OR1A1Q9P1Q5 309 aa8.83□□□□□ -1
DDB1-222ENST00000543627 ELF5Q9UKW6 265 aaPredicted RBP8.83□□□□□ -1
DDB1-222ENST00000543627 MOB4Q9Y3A3 225 aa8.83□□□□□ -1
DDB1-222ENST00000543627 RBM7Q9Y580 266 aaKnown RBP8.83□□□□□ -1
DDB1-222ENST00000543627 FOXI3A8MTJ6 420 aaPredicted RBP8.82□□□□□ -1
DDB1-222ENST00000543627 TRDCB7Z8K6 153 aa8.82□□□□□ -1
DDB1-222ENST00000543627 M0QZ24 198 aa8.82□□□□□ -1
DDB1-222ENST00000543627 RAB27BO00194 218 aa8.82□□□□□ -1
DDB1-222ENST00000543627 GSTT2P0CG29 244 aa8.82□□□□□ -1
DDB1-222ENST00000543627 GSTT2BP0CG30 244 aa8.82□□□□□ -1
DDB1-222ENST00000543627 HIST1H1DP16402 221 aaKnown RBP8.82□□□□□ -1
DDB1-222ENST00000543627 ZBTB25P24278 435 aa8.82□□□□□ -1
DDB1-222ENST00000543627 SERPINB10P48595 397 aa8.82□□□□□ -1
DDB1-222ENST00000543627 HERPUD1Q15011 391 aa8.82□□□□□ -1
DDB1-222ENST00000543627 ZNF880Q6PDB4 577 aa8.82□□□□□ -1
DDB1-222ENST00000543627 ZNF554Q86TJ5 538 aa8.82□□□□□ -1
DDB1-222ENST00000543627 THNSL2Q86YJ6 484 aa8.82□□□□□ -1
DDB1-222ENST00000543627 OR2T10Q8NGZ9 312 aa8.82□□□□□ -1
DDB1-222ENST00000543627 FAM110DQ8TAY7 271 aaPredicted RBP8.82□□□□□ -1
DDB1-222ENST00000543627 CFHR4Q92496 578 aa8.82□□□□□ -1
DDB1-222ENST00000543627 YIPF6Q96EC8 236 aa8.82□□□□□ -1
DDB1-222ENST00000543627 EAF1Q96JC9 268 aaPredicted RBP8.82□□□□□ -1
DDB1-222ENST00000543627 CITED1Q99966 193 aa8.82□□□□□ -1
DDB1-222ENST00000543627 MGAT4AQ9UM21 535 aa8.82□□□□□ -1
DDB1-222ENST00000543627 KCNK7Q9Y2U2 307 aa8.82□□□□□ -1
DDB1-222ENST00000543627 ANK2Q01484 3957 aa8.82□□□□□ -1
DDB1-222ENST00000543627 TRAV18A0A075B6X5 111 aa8.81□□□□□ -1
DDB1-222ENST00000543627 A0A1W2PRX2 142 aa8.81□□□□□ -1
DDB1-222ENST00000543627 FAM90A9PA6NNJ1 464 aa8.81□□□□□ -1
DDB1-222ENST00000543627 FBXO24O75426 580 aa8.81□□□□□ -1
DDB1-222ENST00000543627 FCER2P06734 321 aa8.81□□□□□ -1
DDB1-222ENST00000543627 FCGR3AP08637 254 aa8.81□□□□□ -1
DDB1-222ENST00000543627 CD28P10747 220 aa8.81□□□□□ -1
DDB1-222ENST00000543627 RPS19P39019 145 aaKnown RBP8.81□□□□□ -1
DDB1-222ENST00000543627 GNG2P59768 71 aa8.81□□□□□ -1
DDB1-222ENST00000543627 Q3ZCU0 254 aa8.81□□□□□ -1
DDB1-222ENST00000543627 RPL39P5Q59GN2 51 aa8.81□□□□□ -1
DDB1-222ENST00000543627 KHDC1LQ5JSQ8 128 aa8.81□□□□□ -1
DDB1-222ENST00000543627 STEAP3Q658P3 488 aa8.81□□□□□ -1
DDB1-222ENST00000543627 C11orf88Q6PI97 169 aa8.81□□□□□ -1
DDB1-222ENST00000543627 C8orf31Q8N9H6 132 aa8.81□□□□□ -1
DDB1-222ENST00000543627 PTX4Q96A99 478 aa8.81□□□□□ -1
DDB1-222ENST00000543627 S1PR3Q99500 378 aa8.81□□□□□ -1
DDB1-222ENST00000543627 RASL11BQ9BPW5 248 aa8.81□□□□□ -1
DDB1-222ENST00000543627 GINS4Q9BRT9 223 aa8.81□□□□□ -1
DDB1-222ENST00000543627 FUNDC2Q9BWH2 189 aa8.81□□□□□ -1
DDB1-222ENST00000543627 MRPL20Q9BYC9 149 aaKnown RBP8.81□□□□□ -1
DDB1-222ENST00000543627 PARP12Q9H0J9 701 aaKnown RBP8.81□□□□□ -1
DDB1-222ENST00000543627 SERTAD4Q9NUC0 356 aa8.81□□□□□ -1
DDB1-222ENST00000543627 RHBDL2Q9NX52 303 aa8.81□□□□□ -1
DDB1-222ENST00000543627 LINC00527Q9UJ94 153 aa8.81□□□□□ -1
DDB1-222ENST00000543627 NBEAL1Q6ZS30 2694 aa8.8□□□□□ -1
DDB1-222ENST00000543627 SAA2-SAA4A0A096LPE2 208 aa8.8□□□□□ -1
DDB1-222ENST00000543627 TRBV6-6A0A0A6YYG2 114 aa8.8□□□□□ -1
DDB1-222ENST00000543627 TMEM235A6NFC5 223 aa8.8□□□□□ -1
DDB1-222ENST00000543627 SERPINE3A8MV23 424 aa8.8□□□□□ -1
DDB1-222ENST00000543627 H7C2Y5 167 aa8.8□□□□□ -1
DDB1-222ENST00000543627 M0QZK8 103 aa8.8□□□□□ -1
DDB1-222ENST00000543627 MFNGO00587 321 aa8.8□□□□□ -1
DDB1-222ENST00000543627 FABP7O15540 132 aa8.8□□□□□ -1
DDB1-222ENST00000543627 TXNL1O43396 289 aa8.8□□□□□ -1
DDB1-222ENST00000543627 MOSP00540 346 aa8.8□□□□□ -1
DDB1-222ENST00000543627 CSF1P09603 554 aa8.8□□□□□ -1
DDB1-222ENST00000543627 SAA2P0DJI9 122 aaPredicted RBP8.8□□□□□ -1
DDB1-222ENST00000543627 CD1BP29016 333 aa8.8□□□□□ -1
DDB1-222ENST00000543627 VBP1P61758 197 aa8.8□□□□□ -1
DDB1-222ENST00000543627 NCS1P62166 190 aa8.8□□□□□ -1
DDB1-222ENST00000543627 IGSF11Q5DX21 431 aa8.8□□□□□ -1
DDB1-222ENST00000543627 TREML4Q6UXN2 200 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms