RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 C3orf36Q3SXR2 165 aa15.04■□□□□ -0
GNE-204ENST00000539208 LURAP1Q96LR2 239 aa15.04■□□□□ -0
GNE-204ENST00000539208 SEBOXQ9HB31 216 aaPredicted RBP15.04■□□□□ -0
GNE-204ENST00000539208 FZR1Q9UM11 496 aa15.04■□□□□ -0
GNE-204ENST00000539208 TM4SF5O14894 197 aa15.04■□□□□ -0
GNE-204ENST00000539208 PTBP3O95758 552 aaKnown RBP15.04■□□□□ -0
GNE-204ENST00000539208 CTRB1P17538 263 aa15.04■□□□□ -0
GNE-204ENST00000539208 TAS2R30P59541 319 aa15.04■□□□□ -0
GNE-204ENST00000539208 HFEQ30201 348 aa15.04■□□□□ -0
GNE-204ENST00000539208 CTRB2Q6GPI1 263 aa15.04■□□□□ -0
GNE-204ENST00000539208 TMEM217Q8N7C4 229 aa15.04■□□□□ -0
GNE-204ENST00000539208 EIF5A2Q9GZV4 153 aaKnown RBP15.04■□□□□ -0
GNE-204ENST00000539208 UFSP2Q9NUQ7 469 aa15.04■□□□□ -0
GNE-204ENST00000539208 EP300Q09472 2414 aaPredicted RBP15.03■□□□□ -0
GNE-204ENST00000539208 BTBD17A6NE02 478 aa15.03■□□□□ -0
GNE-204ENST00000539208 FAM90A26D6RGX4 464 aa15.03■□□□□ -0
GNE-204ENST00000539208 ZNF16P17020 682 aaPredicted RBP15.03■□□□□ -0
GNE-204ENST00000539208 PPT1P50897 306 aa15.03■□□□□ -0
GNE-204ENST00000539208 COL10A1Q03692 680 aa15.03■□□□□ -0
GNE-204ENST00000539208 IZUMO4Q1ZYL8 232 aa15.03■□□□□ -0
GNE-204ENST00000539208 TIMM23BQ5SRD1 257 aa15.03■□□□□ -0
GNE-204ENST00000539208 DPPA3Q6W0C5 159 aa15.03■□□□□ -0
GNE-204ENST00000539208 URB1O60287 2271 aaKnown RBP15.03■□□□□ -0
GNE-204ENST00000539208 SP5Q6BEB4 398 aaPredicted RBP15.02■□□□□ -0
GNE-204ENST00000539208 OR10Z1Q8NGY1 313 aa15.02■□□□□ -0
GNE-204ENST00000539208 FAM215AQ9Y5M1 114 aa15.02■□□□□ -0
GNE-204ENST00000539208 MMP24Q9Y5R2 645 aa15.02■□□□□ -0
GNE-204ENST00000539208 H7C2Y5 167 aa15.02□□□□□ -0.01
GNE-204ENST00000539208 CFHR2P36980 270 aa15.02□□□□□ -0.01
GNE-204ENST00000539208 GABRA2P47869 451 aa15.02□□□□□ -0.01
GNE-204ENST00000539208 KRBOX4Q5JUW0 171 aa15.02□□□□□ -0.01
GNE-204ENST00000539208 TRAT1Q6PIZ9 186 aa15.02□□□□□ -0.01
GNE-204ENST00000539208 FAM90A1Q86YD7 464 aa15.02□□□□□ -0.01
GNE-204ENST00000539208 FGFRL1Q8N441 504 aa15.02□□□□□ -0.01
GNE-204ENST00000539208 TCTEX1D1Q8N7M0 179 aa15.02□□□□□ -0.01
GNE-204ENST00000539208 OR52L2PQ8NGH6 319 aa15.02□□□□□ -0.01
GNE-204ENST00000539208 NINJ1Q92982 152 aa15.02□□□□□ -0.01
GNE-204ENST00000539208 WASF3Q9UPY6 502 aa15.02□□□□□ -0.01
GNE-204ENST00000539208 RFNGQ9Y644 331 aa15.02□□□□□ -0.01
GNE-204ENST00000539208 ATP6V1G2-DDX39BF2Z307 99 aa15.01□□□□□ -0.01
GNE-204ENST00000539208 TIMP3P35625 211 aa15.01□□□□□ -0.01
GNE-204ENST00000539208 PPP1CCP36873 323 aaKnown RBP15.01□□□□□ -0.01
GNE-204ENST00000539208 C1orf185Q5T7R7 199 aa15.01□□□□□ -0.01
GNE-204ENST00000539208 ZNF474Q6S9Z5 364 aaPredicted RBP15.01□□□□□ -0.01
GNE-204ENST00000539208 LRRC29Q8WV35 223 aa15.01□□□□□ -0.01
GNE-204ENST00000539208 OR2D2Q9H210 308 aa15.01□□□□□ -0.01
GNE-204ENST00000539208 IFNA5P01569 189 aa15.01□□□□□ -0.01
GNE-204ENST00000539208 CRYABP02511 175 aaKnown RBP15.01□□□□□ -0.01
GNE-204ENST00000539208 NFYBP25208 207 aa15.01□□□□□ -0.01
GNE-204ENST00000539208 FLI1Q01543 452 aaPredicted RBP15.01□□□□□ -0.01
GNE-204ENST00000539208 SPSB3Q6PJ21 355 aa15.01□□□□□ -0.01
GNE-204ENST00000539208 MRGPRDQ8TDS7 321 aa15.01□□□□□ -0.01
GNE-204ENST00000539208 SLC35B3Q9H1N7 401 aa15.01□□□□□ -0.01
GNE-204ENST00000539208 PSENENQ9NZ42 101 aa15.01□□□□□ -0.01
GNE-204ENST00000539208 METRNQ9UJH8 293 aa15.01□□□□□ -0.01
GNE-204ENST00000539208 SRRM5B3KS81 715 aa15□□□□□ -0.01
GNE-204ENST00000539208 IGHV3-13P01766 116 aa15□□□□□ -0.01
GNE-204ENST00000539208 P0C879 139 aa15□□□□□ -0.01
GNE-204ENST00000539208 PRDX2P32119 198 aa15□□□□□ -0.01
GNE-204ENST00000539208 GLIPR1P48060 266 aa15□□□□□ -0.01
GNE-204ENST00000539208 HTD2P86397 168 aa15□□□□□ -0.01
GNE-204ENST00000539208 HOXA4Q00056 320 aaPredicted RBP15□□□□□ -0.01
GNE-204ENST00000539208 CATR1Q13166 79 aa15□□□□□ -0.01
GNE-204ENST00000539208 CD177Q8N6Q3 437 aa15□□□□□ -0.01
GNE-204ENST00000539208 PRSS33Q8NF86 280 aa15□□□□□ -0.01
GNE-204ENST00000539208 OR2Z1Q8NG97 314 aa15□□□□□ -0.01
GNE-204ENST00000539208 C5orf30Q96GV9 206 aa15□□□□□ -0.01
GNE-204ENST00000539208 ABHD14AQ9BUJ0 271 aa15□□□□□ -0.01
GNE-204ENST00000539208 INTS1Q8N201 2190 aaKnown RBP15□□□□□ -0.01
GNE-204ENST00000539208 H3BP45 60 aa15□□□□□ -0.01
GNE-204ENST00000539208 S100PBPQ96BU1 408 aa15□□□□□ -0.01
GNE-204ENST00000539208 AIFM2Q9BRQ8 373 aa15□□□□□ -0.01
GNE-204ENST00000539208 RNF150Q9ULK6 438 aa15□□□□□ -0.01
GNE-204ENST00000539208 FRYQ5TBA9 3013 aa14.99□□□□□ -0.01
GNE-204ENST00000539208 PAX6P26367 422 aa14.99□□□□□ -0.01
GNE-204ENST00000539208 ZNF83P51522 516 aa14.99□□□□□ -0.01
GNE-204ENST00000539208 TMEM267Q0VDI3 215 aaPredicted RBP14.99□□□□□ -0.01
GNE-204ENST00000539208 MSMPQ1L6U9 139 aa14.99□□□□□ -0.01
GNE-204ENST00000539208 AKR1C8PQ5T2L2 129 aa14.99□□□□□ -0.01
GNE-204ENST00000539208 RBMXL3Q8N7X1 1067 aaKnown RBP14.99□□□□□ -0.01
GNE-204ENST00000539208 OR13A1Q8NGR1 328 aa14.99□□□□□ -0.01
GNE-204ENST00000539208 SMCO4Q9NRQ5 59 aa14.99□□□□□ -0.01
GNE-204ENST00000539208 MED19A0JLT2 244 aaPredicted RBP14.98□□□□□ -0.01
GNE-204ENST00000539208 ZNF737O75373 536 aa14.98□□□□□ -0.01
GNE-204ENST00000539208 TFF1P04155 84 aa14.98□□□□□ -0.01
GNE-204ENST00000539208 ADH4P08319 380 aa14.98□□□□□ -0.01
GNE-204ENST00000539208 OR8U8P0C7N1 319 aa14.98□□□□□ -0.01
GNE-204ENST00000539208 GLRXP35754 106 aa14.98□□□□□ -0.01
GNE-204ENST00000539208 RPL30P62888 115 aaKnown RBP14.98□□□□□ -0.01
GNE-204ENST00000539208 RUNX1Q01196 453 aa14.98□□□□□ -0.01
GNE-204ENST00000539208 TLE4Q04727 773 aa14.98□□□□□ -0.01
GNE-204ENST00000539208 FAM216AQ8WUB2 273 aa14.98□□□□□ -0.01
GNE-204ENST00000539208 PARD6GQ9BYG4 376 aaPredicted RBP14.98□□□□□ -0.01
GNE-204ENST00000539208 KIAA1456Q9P272 454 aa14.98□□□□□ -0.01
GNE-204ENST00000539208 PRRC2CQ9Y520 2896 aaKnown RBP14.98□□□□□ -0.01
GNE-204ENST00000539208 RBFOX3A6NFN3 312 aa14.98□□□□□ -0.01
GNE-204ENST00000539208 C15orf65H3BRN8 121 aa14.98□□□□□ -0.01
GNE-204ENST00000539208 SPINT2O43291 252 aa14.98□□□□□ -0.01
GNE-204ENST00000539208 CRYAAP02489 173 aa14.98□□□□□ -0.01
GNE-204ENST00000539208 UBE2KP61086 200 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms