RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 DYNLRB2Q8TF09 96 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 CT55Q8WUE5 264 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 MIEN1Q9BRT3 115 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 EVPLQ92817 2033 aa8.69□□□□□ -1.02
COL4A6-208ENST00000538570 SYNGR1O43759 233 aa8.69□□□□□ -1.02
COL4A6-208ENST00000538570 PSG2P11465 335 aa8.69□□□□□ -1.02
COL4A6-208ENST00000538570 RCC1P18754 421 aaPredicted RBP8.69□□□□□ -1.02
COL4A6-208ENST00000538570 CTGFP29279 349 aa8.69□□□□□ -1.02
COL4A6-208ENST00000538570 SPEM2Q0P670 501 aa8.69□□□□□ -1.02
COL4A6-208ENST00000538570 FLRT3Q9NZU0 649 aa8.69□□□□□ -1.02
COL4A6-208ENST00000538570 LOC389332A0A1B0GUA5 103 aa8.69□□□□□ -1.02
COL4A6-208ENST00000538570 HYAL1Q12794 435 aa8.69□□□□□ -1.02
COL4A6-208ENST00000538570 PIGYQ3MUY2 71 aa8.69□□□□□ -1.02
COL4A6-208ENST00000538570 ZNF764Q96H86 408 aaPredicted RBP8.69□□□□□ -1.02
COL4A6-208ENST00000538570 TMEM204Q9BSN7 226 aa8.69□□□□□ -1.02
COL4A6-208ENST00000538570 ELOVL5Q9NYP7 299 aa8.69□□□□□ -1.02
COL4A6-208ENST00000538570 HIGD1AQ9Y241 93 aa8.69□□□□□ -1.02
COL4A6-208ENST00000538570 SPINK2P20155 84 aa8.69□□□□□ -1.02
COL4A6-208ENST00000538570 KIR3DL2P43630 455 aa8.69□□□□□ -1.02
COL4A6-208ENST00000538570 SNAI3Q3KNW1 292 aa8.69□□□□□ -1.02
COL4A6-208ENST00000538570 CYB561D1Q8N8Q1 229 aa8.69□□□□□ -1.02
COL4A6-208ENST00000538570 OR2V2Q96R30 315 aa8.69□□□□□ -1.02
COL4A6-208ENST00000538570 RABAC1Q9UI14 185 aa8.69□□□□□ -1.02
COL4A6-208ENST00000538570 CDC42EP3Q9UKI2 254 aa8.69□□□□□ -1.02
COL4A6-208ENST00000538570 TMSB15BA0A087X1C1 80 aa8.69□□□□□ -1.02
COL4A6-208ENST00000538570 HBZP02008 142 aa8.69□□□□□ -1.02
COL4A6-208ENST00000538570 SNRPCP09234 159 aaKnown RBP8.69□□□□□ -1.02
COL4A6-208ENST00000538570 TWIST1Q15672 202 aa8.69□□□□□ -1.02
COL4A6-208ENST00000538570 ASB5Q8WWX0 329 aa8.69□□□□□ -1.02
COL4A6-208ENST00000538570 LHX9Q9NQ69 397 aa8.69□□□□□ -1.02
COL4A6-208ENST00000538570 AURKAIP1Q9NWT8 199 aaPredicted RBP8.69□□□□□ -1.02
COL4A6-208ENST00000538570 OR51B2Q9Y5P1 312 aa8.69□□□□□ -1.02
COL4A6-208ENST00000538570 DHRS7CA6NNS2 312 aa8.69□□□□□ -1.02
COL4A6-208ENST00000538570 CA11O75493 328 aa8.69□□□□□ -1.02
COL4A6-208ENST00000538570 MMP16P51512 607 aa8.69□□□□□ -1.02
COL4A6-208ENST00000538570 OR1K1Q8NGR3 316 aa8.69□□□□□ -1.02
COL4A6-208ENST00000538570 ZNF519Q8TB69 540 aa8.69□□□□□ -1.02
COL4A6-208ENST00000538570 DNASE2BQ8WZ79 361 aa8.69□□□□□ -1.02
COL4A6-208ENST00000538570 COX14Q96I36 57 aa8.69□□□□□ -1.02
COL4A6-208ENST00000538570 RASL10BQ96S79 203 aa8.69□□□□□ -1.02
COL4A6-208ENST00000538570 IGHV1OR15-9A0A0B4J2B8 117 aa8.68□□□□□ -1.02
COL4A6-208ENST00000538570 C7orf66A4D0T2 115 aa8.68□□□□□ -1.02
COL4A6-208ENST00000538570 AGFG2O95081 481 aa8.68□□□□□ -1.02
COL4A6-208ENST00000538570 LINC00614P0C842 121 aa8.68□□□□□ -1.02
COL4A6-208ENST00000538570 NXPH1P58417 271 aa8.68□□□□□ -1.02
COL4A6-208ENST00000538570 ZNF660Q6AZW8 331 aaPredicted RBP8.68□□□□□ -1.02
COL4A6-208ENST00000538570 MRPL52Q86TS9 123 aaKnown RBP8.68□□□□□ -1.02
COL4A6-208ENST00000538570 PAXXQ9BUH6 204 aa8.68□□□□□ -1.02
COL4A6-208ENST00000538570 SMDT1Q9H4I9 107 aa8.68□□□□□ -1.02
COL4A6-208ENST00000538570 KNL1Q8NG31 2342 aa8.68□□□□□ -1.02
COL4A6-208ENST00000538570 COL22A1Q8NFW1 1626 aaPredicted RBP8.68□□□□□ -1.02
COL4A6-208ENST00000538570 MAP1BP46821 2468 aaKnown RBP8.68□□□□□ -1.02
COL4A6-208ENST00000538570 KCNAB3O43448 404 aa8.68□□□□□ -1.02
COL4A6-208ENST00000538570 ATP6V0CP27449 155 aa8.68□□□□□ -1.02
COL4A6-208ENST00000538570 WNT16Q9UBV4 365 aa8.68□□□□□ -1.02
COL4A6-208ENST00000538570 TCFL5Q9UL49 500 aa8.68□□□□□ -1.02
COL4A6-208ENST00000538570 WFDC3Q8IUB2 231 aa8.68□□□□□ -1.02
COL4A6-208ENST00000538570 OR10S1Q8NGN2 331 aa8.68□□□□□ -1.02
COL4A6-208ENST00000538570 SPCS1Q9Y6A9 102 aa8.68□□□□□ -1.02
COL4A6-208ENST00000538570 NPIPB9F8W1W9 429 aa8.68□□□□□ -1.02
COL4A6-208ENST00000538570 J3QR06 171 aa8.68□□□□□ -1.02
COL4A6-208ENST00000538570 CFDP00746 253 aaPredicted RBP8.68□□□□□ -1.02
COL4A6-208ENST00000538570 MT-ND6P03923 174 aa8.68□□□□□ -1.02
COL4A6-208ENST00000538570 CELA2BP08218 269 aaPredicted RBP8.68□□□□□ -1.02
COL4A6-208ENST00000538570 GPR35Q9HC97 309 aa8.68□□□□□ -1.02
COL4A6-208ENST00000538570 WIPI2Q9Y4P8 454 aa8.68□□□□□ -1.02
COL4A6-208ENST00000538570 DDX60LQ5H9U9 1706 aaKnown RBP8.68□□□□□ -1.02
COL4A6-208ENST00000538570 NUTF2P61970 127 aaKnown RBP8.68□□□□□ -1.02
COL4A6-208ENST00000538570 RELBQ01201 579 aa8.68□□□□□ -1.02
COL4A6-208ENST00000538570 AMMECR1LQ6DCA0 310 aa8.68□□□□□ -1.02
COL4A6-208ENST00000538570 H1FOOQ8IZA3 346 aaPredicted RBP8.68□□□□□ -1.02
COL4A6-208ENST00000538570 AUP1Q9Y679 476 aa8.68□□□□□ -1.02
COL4A6-208ENST00000538570 PRSS23O95084 383 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 ZNF205O95201 554 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 COX6CP09669 75 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 MAGEA5P43359 124 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 C3AR1Q16581 482 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 C1QL3Q5VWW1 255 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 OR4D11Q8NGI4 311 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 ZNF502Q8TBZ5 544 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 RND1Q92730 232 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 PGLYRP3Q96LB9 341 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 TLNRD1Q9H1K6 362 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 FAM60AQ9NP50 221 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 CLN8Q9UBY8 286 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 ZNF324O75467 553 aaPredicted RBP8.67□□□□□ -1.02
COL4A6-208ENST00000538570 ZNF735P0CB33 412 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 APELAP0DMC3 54 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 KCNMB1Q16558 191 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 LRRC75BQ2VPJ9 315 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 C9orf50Q5SZB4 431 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 SGMS2Q8NHU3 365 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 HIST1H2BAQ96A08 127 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 HIST1H4GQ99525 98 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 PCGF1Q9BSM1 259 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 DLEU1O43261 78 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 ZFAND6Q6FIF0 208 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 HOGA1Q86XE5 327 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 LTBP4Q8N2S1 1624 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 PARLQ9H300 379 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms