RNA–Protein interactions for RNA: ENST00000536915.5

CYB561A3-208, Transcript of cytochrome b561 family member A3, human

APPRIS P1 TSL 2 BASIC

Gene CYB561A3, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYB561A3-208	ENST00000536915	KCNIP1	Q9NZI2	227 aa		10.79	□□□□□ -0.68
CYB561A3-208	ENST00000536915	CCDC59	Q9P031	241 aa	Known RBP	10.79	□□□□□ -0.68
CYB561A3-208	ENST00000536915	TRAV18	A0A075B6X5	111 aa		10.78	□□□□□ -0.68
CYB561A3-208	ENST00000536915	IGHV2-26	A0A0B4J1V2	119 aa		10.78	□□□□□ -0.68
CYB561A3-208	ENST00000536915	CCDC160	A6NGH7	325 aa		10.78	□□□□□ -0.68
CYB561A3-208	ENST00000536915	C12orf77	C9JDV5	145 aa		10.78	□□□□□ -0.68
CYB561A3-208	ENST00000536915		G3V4G9	280 aa		10.78	□□□□□ -0.68
CYB561A3-208	ENST00000536915	CD3G	P09693	182 aa		10.78	□□□□□ -0.68
CYB561A3-208	ENST00000536915	HTR1D	P28221	377 aa		10.78	□□□□□ -0.68
CYB561A3-208	ENST00000536915	SSTR5	P35346	364 aa		10.78	□□□□□ -0.68
CYB561A3-208	ENST00000536915	SRSF7	Q16629	238 aa	Known RBP eCLIP	10.78	□□□□□ -0.68
CYB561A3-208	ENST00000536915	PRAMEF5	Q5TYX0	476 aa		10.78	□□□□□ -0.68
CYB561A3-208	ENST00000536915	HACD4	Q5VWC8	232 aa		10.78	□□□□□ -0.68
CYB561A3-208	ENST00000536915	MOB1B	Q7L9L4	216 aa		10.78	□□□□□ -0.68
CYB561A3-208	ENST00000536915	PIFO	Q8TCI5	191 aa		10.78	□□□□□ -0.68
CYB561A3-208	ENST00000536915	HDHD3	Q9BSH5	251 aa	Predicted RBP	10.78	□□□□□ -0.68
CYB561A3-208	ENST00000536915	TAF9B	Q9HBM6	251 aa		10.78	□□□□□ -0.68
CYB561A3-208	ENST00000536915		Q9N2K0	584 aa		10.78	□□□□□ -0.68
CYB561A3-208	ENST00000536915	C12orf4	Q9NQ89	552 aa		10.78	□□□□□ -0.68
CYB561A3-208	ENST00000536915	MGAT4A	Q9UM21	535 aa		10.78	□□□□□ -0.68
CYB561A3-208	ENST00000536915	CMYA5	Q8N3K9	4069 aa		10.78	□□□□□ -0.68
CYB561A3-208	ENST00000536915		A0A075B6Q4	140 aa		10.77	□□□□□ -0.69
CYB561A3-208	ENST00000536915	SPINT2	O43291	252 aa		10.77	□□□□□ -0.69
CYB561A3-208	ENST00000536915	HPGDS	O60760	199 aa		10.77	□□□□□ -0.69
CYB561A3-208	ENST00000536915	HBZ	P02008	142 aa		10.77	□□□□□ -0.69
CYB561A3-208	ENST00000536915	EIF4E	P06730	217 aa	Known RBP	10.77	□□□□□ -0.69
CYB561A3-208	ENST00000536915	PF4V1	P10720	104 aa		10.77	□□□□□ -0.69
CYB561A3-208	ENST00000536915	LOXL3	P58215	753 aa		10.77	□□□□□ -0.69
CYB561A3-208	ENST00000536915	PITPNA	Q00169	270 aa		10.77	□□□□□ -0.69
CYB561A3-208	ENST00000536915	HMGN3	Q15651	99 aa		10.77	□□□□□ -0.69
CYB561A3-208	ENST00000536915	TMEM30B	Q3MIR4	351 aa		10.77	□□□□□ -0.69
CYB561A3-208	ENST00000536915	CCDC144NL	Q6NUI1	221 aa		10.77	□□□□□ -0.69
CYB561A3-208	ENST00000536915	BAIAP2L2	Q6UXY1	529 aa		10.77	□□□□□ -0.69
CYB561A3-208	ENST00000536915		Q6ZS49	121 aa		10.77	□□□□□ -0.69
CYB561A3-208	ENST00000536915	TMEM219	Q86XT9	240 aa		10.77	□□□□□ -0.69
CYB561A3-208	ENST00000536915	ABHD12	Q8N2K0	398 aa		10.77	□□□□□ -0.69
CYB561A3-208	ENST00000536915	OR4X2	Q8NGF9	303 aa		10.77	□□□□□ -0.69
CYB561A3-208	ENST00000536915	SLIRP	Q9GZT3	109 aa	Known RBP	10.77	□□□□□ -0.69
CYB561A3-208	ENST00000536915	NXF2	Q9GZY0	626 aa	Known RBP	10.77	□□□□□ -0.69
CYB561A3-208	ENST00000536915	AUNIP	Q9H7T9	357 aa		10.77	□□□□□ -0.69
CYB561A3-208	ENST00000536915	CHMP1A	Q9HD42	196 aa	Predicted RBP	10.77	□□□□□ -0.69
CYB561A3-208	ENST00000536915	SERTAD4	Q9NUC0	356 aa		10.77	□□□□□ -0.69
CYB561A3-208	ENST00000536915	NECAP2	Q9NVZ3	263 aa		10.77	□□□□□ -0.69
CYB561A3-208	ENST00000536915	ELF5	Q9UKW6	265 aa	Predicted RBP	10.77	□□□□□ -0.69
CYB561A3-208	ENST00000536915	HILPDA	Q9Y5L2	63 aa		10.77	□□□□□ -0.69
CYB561A3-208	ENST00000536915	LEUTX	A8MZ59	168 aa		10.76	□□□□□ -0.69
CYB561A3-208	ENST00000536915		M0QZK8	103 aa		10.76	□□□□□ -0.69
CYB561A3-208	ENST00000536915	CTDSP2	O14595	271 aa		10.76	□□□□□ -0.69
CYB561A3-208	ENST00000536915	TOR1A	O14656	332 aa		10.76	□□□□□ -0.69
CYB561A3-208	ENST00000536915	IGLV1-47	P01700	117 aa		10.76	□□□□□ -0.69
CYB561A3-208	ENST00000536915	ELK1	P19419	428 aa		10.76	□□□□□ -0.69
CYB561A3-208	ENST00000536915	CD33	P20138	364 aa		10.76	□□□□□ -0.69
CYB561A3-208	ENST00000536915	NFYB	P25208	207 aa		10.76	□□□□□ -0.69
CYB561A3-208	ENST00000536915	PAX6	P26367	422 aa		10.76	□□□□□ -0.69
CYB561A3-208	ENST00000536915	MNDA	P41218	407 aa		10.76	□□□□□ -0.69
CYB561A3-208	ENST00000536915	RAB13	P51153	203 aa		10.76	□□□□□ -0.69
CYB561A3-208	ENST00000536915	MRPS15	P82914	257 aa	Known RBP	10.76	□□□□□ -0.69
CYB561A3-208	ENST00000536915	HTD2	P86397	168 aa		10.76	□□□□□ -0.69
CYB561A3-208	ENST00000536915	ARFRP1	Q13795	201 aa		10.76	□□□□□ -0.69
CYB561A3-208	ENST00000536915	C5orf24	Q7Z6I8	188 aa		10.76	□□□□□ -0.69
CYB561A3-208	ENST00000536915	OR1L1	Q8NH94	360 aa		10.76	□□□□□ -0.69
CYB561A3-208	ENST00000536915	MRAP	Q8TCY5	172 aa		10.76	□□□□□ -0.69
CYB561A3-208	ENST00000536915	GALM	Q96C23	342 aa		10.76	□□□□□ -0.69
CYB561A3-208	ENST00000536915	GFOD1	Q9NXC2	390 aa		10.76	□□□□□ -0.69
CYB561A3-208	ENST00000536915	DPM3	Q9P2X0	92 aa		10.76	□□□□□ -0.69
CYB561A3-208	ENST00000536915	TMEM235	A6NFC5	223 aa		10.75	□□□□□ -0.69
CYB561A3-208	ENST00000536915		A6NHS1	94 aa		10.75	□□□□□ -0.69
CYB561A3-208	ENST00000536915	TRDC	B7Z8K6	153 aa		10.75	□□□□□ -0.69
CYB561A3-208	ENST00000536915	SDCBP	O00560	298 aa	Predicted RBP	10.75	□□□□□ -0.69
CYB561A3-208	ENST00000536915	SSX5	O60225	188 aa		10.75	□□□□□ -0.69
CYB561A3-208	ENST00000536915	TPPP	O94811	219 aa		10.75	□□□□□ -0.69
CYB561A3-208	ENST00000536915	DUS4L	O95620	317 aa	Known RBP	10.75	□□□□□ -0.69
CYB561A3-208	ENST00000536915	HLA-DQB1	P01920	261 aa		10.75	□□□□□ -0.69
CYB561A3-208	ENST00000536915	PF4	P02776	101 aa		10.75	□□□□□ -0.69
CYB561A3-208	ENST00000536915	FCGR3A	P08637	254 aa		10.75	□□□□□ -0.69
CYB561A3-208	ENST00000536915	CD28	P10747	220 aa		10.75	□□□□□ -0.69
CYB561A3-208	ENST00000536915	DTYMK	P23919	212 aa		10.75	□□□□□ -0.69
CYB561A3-208	ENST00000536915	TALDO1	P37837	337 aa		10.75	□□□□□ -0.69
CYB561A3-208	ENST00000536915	PRRX1	P54821	245 aa		10.75	□□□□□ -0.69
CYB561A3-208	ENST00000536915		Q3ZCU0	254 aa		10.75	□□□□□ -0.69
CYB561A3-208	ENST00000536915	LY6G6F	Q5SQ64	297 aa		10.75	□□□□□ -0.69
CYB561A3-208	ENST00000536915	UTF1	Q5T230	341 aa		10.75	□□□□□ -0.69
CYB561A3-208	ENST00000536915	CENPV	Q7Z7K6	275 aa	Predicted RBP	10.75	□□□□□ -0.69
CYB561A3-208	ENST00000536915	C8orf31	Q8N9H6	132 aa		10.75	□□□□□ -0.69
CYB561A3-208	ENST00000536915	OR9G1	Q8NH87	305 aa		10.75	□□□□□ -0.69
CYB561A3-208	ENST00000536915	UBALD1	Q8TB05	177 aa		10.75	□□□□□ -0.69
CYB561A3-208	ENST00000536915	SETD6	Q8TBK2	473 aa		10.75	□□□□□ -0.69
CYB561A3-208	ENST00000536915	CITED2	Q99967	270 aa	Predicted RBP	10.75	□□□□□ -0.69
CYB561A3-208	ENST00000536915	GPR61	Q9BZJ8	451 aa		10.75	□□□□□ -0.69
CYB561A3-208	ENST00000536915	MIXL1	Q9H2W2	232 aa		10.75	□□□□□ -0.69
CYB561A3-208	ENST00000536915	ZNF286A	Q9HBT8	521 aa		10.75	□□□□□ -0.69
CYB561A3-208	ENST00000536915	PSG11	Q9UQ72	335 aa		10.75	□□□□□ -0.69
CYB561A3-208	ENST00000536915	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	10.75	□□□□□ -0.69
CYB561A3-208	ENST00000536915	A3GALT2	U3KPV4	340 aa		10.75	□□□□□ -0.69
CYB561A3-208	ENST00000536915	OOSP1	A8MZH6	123 aa		10.74	□□□□□ -0.69
CYB561A3-208	ENST00000536915		J3QR06	171 aa		10.74	□□□□□ -0.69
CYB561A3-208	ENST00000536915	SCT	P09683	121 aa		10.74	□□□□□ -0.69
CYB561A3-208	ENST00000536915	TAS2R20	P59543	309 aa		10.74	□□□□□ -0.69
CYB561A3-208	ENST00000536915	GNG2	P59768	71 aa		10.74	□□□□□ -0.69
CYB561A3-208	ENST00000536915	HABP2	Q14520	560 aa	Predicted RBP	10.74	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms